Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col5a3

Gene Name Gene ID Reads Annotation
Col5a3 ENSMUSG00000004098 38 collagen, type V, alpha 3 [Source:MGI Symbol;Acc:MGI:1858212]







Genes with expression patterns similar to Col5a3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col5a3 ENSMUSG00000004098 38 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type V, alpha 3 [Source:MGI Symbol;Acc:MGI:1858212]
2. 0610012H03Rik 0610012H03Rik 53 0.856 - - 0.856 - - -
3. Cryba4 ENSMUSG00000066975 9 0.855 - - 0.855 - - - crystallin, beta A4 [Source:MGI Symbol;Acc:MGI:102716]
4. Fgfbp1 ENSMUSG00000048373 9 0.843 - - - 0.843 - - fibroblast growth factor binding protein 1 [Source:MGI Symbol;Acc:MGI:1096350]
5. Agtr2 ENSMUSG00000068122 333 0.838 - - 0.838 - - - angiotensin II receptor, type 2 [Source:MGI Symbol;Acc:MGI:87966]
6. Hist1h2aj ENSMUSG00000080076 12 0.824 - - 0.824 - - - histone cluster 1, H2aj [Source:MGI Symbol;Acc:MGI:2448312]
7. 4930524O07Rik ENSMUSG00000090207 0 0.818 - - 0.818 - - - RIKEN cDNA 4930524O07 gene [Source:MGI Symbol;Acc:MGI:1915514]
8. Ankfn1 ENSMUSG00000047773 2 0.818 - - 0.818 - - - ankyrin-repeat and fibronectin type III domain containing 1 [Source:MGI Symbol;Acc:MGI:2686021]
9. 2010016I18Rik ENSMUSG00000091575 0 0.818 - - 0.818 - - - RIKEN cDNA 2010016I18 gene [Source:MGI Symbol;Acc:MGI:1916456]
10. 4932435O22Rik ENSMUSG00000062391 3 0.818 - - 0.818 - - - RIKEN cDNA 4932435O22 gene [Source:MGI Symbol;Acc:MGI:2442791]
11. Sohlh2 ENSMUSG00000027794 2 0.818 - - 0.818 - - - spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:MGI Symbol;Acc:MGI:1921684]
12. Gm12733 ENSMUSG00000081543 2 0.818 - - 0.818 - - - predicted gene 12733 [Source:MGI Symbol;Acc:MGI:3650214]
13. 4930527J03Rik ENSMUSG00000070489 2 0.818 - - 0.818 - - - RIKEN cDNA 4930527J03 gene [Source:MGI Symbol;Acc:MGI:1922414]
14. AU019990 ENSMUSG00000074783 5 0.818 - - 0.818 - - - expressed sequence AU019990 [Source:MGI Symbol;Acc:MGI:3034641]
15. Sult6b1 ENSMUSG00000038045 4 0.818 - - 0.818 - - - sulfotransferase family, cytosolic, 6B, member 1 [Source:MGI Symbol;Acc:MGI:1920921]
16. Gm7108 ENSMUSG00000083253 12 0.818 - - 0.818 - - - predicted gene 7108 [Source:MGI Symbol;Acc:MGI:3645440]
17. Gm2464 ENSMUSG00000097338, ENSMUSG00000102215 9 0.818 - - 0.818 - - - predicted gene 2464 [Source:MGI Symbol;Acc:MGI:3780631]
18. Gm11264 ENSMUSG00000087110 3 0.818 - - 0.818 - - - predicted gene 11264 [Source:MGI Symbol;Acc:MGI:3649480]
19. Gm23201 ENSMUSG00000077565 0 0.818 - - 0.818 - - - predicted gene, 23201 [Source:MGI Symbol;Acc:MGI:5452978]
20. Gm26521 ENSMUSG00000097422 0 0.818 - - 0.818 - - - predicted gene, 26521 [Source:MGI Symbol;Acc:MGI:5477015]
21. Ankrd7 ENSMUSG00000029517 19 0.818 - - 0.818 - - - ankyrin repeat domain 7 [Source:MGI Symbol;Acc:MGI:1922446]
22. Zfp541 ENSMUSG00000078796 2 0.818 - - 0.818 - - - zinc finger protein 541 [Source:MGI Symbol;Acc:MGI:3647699]
23. Lrrc63 ENSMUSG00000021997 0 0.818 - - 0.818 - - - leucine rich repeat containing 63 [Source:MGI Symbol;Acc:MGI:1918109]
24. Gm11767 ENSMUSG00000085207 2 0.818 - - 0.818 - - - predicted gene 11767 [Source:MGI Symbol;Acc:MGI:3650674]
25. RP23-224I23.1 RP23-224I23.1 0 0.818 - - 0.818 - - -
26. WT1-AS_1 WT1-AS_1 0 0.818 - - 0.818 - - -
27. Gm5619 ENSMUSG00000099980 5 0.818 - - 0.818 - - - predicted gene 5619 [Source:MGI Symbol;Acc:MGI:3643807]
28. Gm23300 ENSMUSG00000064646 9 0.818 - - 0.818 - - - predicted gene, 23300 [Source:MGI Symbol;Acc:MGI:5453077]
29. Chrm1 ENSMUSG00000032773 10 0.818 - - 0.818 - - - cholinergic receptor, muscarinic 1, CNS [Source:MGI Symbol;Acc:MGI:88396]
30. Tmem255b ENSMUSG00000038457 21 0.818 - - 0.818 - - - transmembrane protein 255B [Source:MGI Symbol;Acc:MGI:2685533]
31. Pcp2 ENSMUSG00000004630 2 0.818 - - 0.818 - - - Purkinje cell protein 2 (L7) [Source:MGI Symbol;Acc:MGI:97508]
32. Prr19 ENSMUSG00000058741 14 0.818 - - 0.818 - - - proline rich 19 [Source:MGI Symbol;Acc:MGI:3648539]
33. Tex38 ENSMUSG00000044556 11 0.818 - - 0.818 - - - testis expressed 38 [Source:MGI Symbol;Acc:MGI:1922423]
34. Gm3252 ENSMUSG00000094628 30 0.812 - - 0.812 - - - predicted gene 3252 [Source:MGI Symbol;Acc:MGI:3781430]
35. Gm15867 ENSMUSG00000089812 19 0.81 - - 0.810 - - - predicted gene 15867 [Source:MGI Symbol;Acc:MGI:3801862]
36. Wnt10b ENSMUSG00000022996 1 0.805 - - 0.805 - - - wingless-type MMTV integration site family, member 10B [Source:MGI Symbol;Acc:MGI:108061]
37. Gm6225 ENSMUSG00000097746 7 0.805 - - 0.805 - - - predicted gene 6225 [Source:MGI Symbol;Acc:MGI:3643252]
38. Trpv3 ENSMUSG00000043029 4 0.798 - - 0.798 - - - transient receptor potential cation channel, subfamily V, member 3 [Source:MGI Symbol;Acc:MGI:2181407]
39. Ankrd2 ENSMUSG00000025172 19 0.787 - - 0.787 - - - ankyrin repeat domain 2 (stretch responsive muscle) [Source:MGI Symbol;Acc:MGI:1861447]
40. Myl2 ENSMUSG00000013936 17 0.786 - - 0.786 - - - myosin, light polypeptide 2, regulatory, cardiac, slow [Source:MGI Symbol;Acc:MGI:97272]
41. 4933427J07Rik ENSMUSG00000087267 104 0.779 - - 0.779 - - - RIKEN cDNA 4933427J07 gene [Source:MGI Symbol;Acc:MGI:1918470]
42. Clca5 Clca5 15 0.774 - - 0.774 - - -
43. Gm26529 Gm26529 12 0.773 - - 0.773 - - -
44. Zfp869 ENSMUSG00000054648 6 0.772 - - 0.772 - - - zinc finger protein 869 [Source:MGI Symbol;Acc:MGI:1914119]
45. C230062I16Rik ENSMUSG00000063623 11 0.772 - - 0.772 - - - RIKEN cDNA C230062I16 gene [Source:MGI Symbol;Acc:MGI:2442417]
46. Atp1b4 ENSMUSG00000016327 10 0.765 - - 0.765 - - - ATPase, (Na+)/K+ transporting, beta 4 polypeptide [Source:MGI Symbol;Acc:MGI:1915071]
47. Gm15832 ENSMUSG00000085894 28 0.761 - - - 0.761 - - predicted gene 15832 [Source:MGI Symbol;Acc:MGI:3834078]
48. A730085A09Rik A730085A09Rik 14 0.761 - - - 0.761 - -
49. Gm5453 ENSMUSG00000062461 26 0.757 - - - 0.757 - - predicted gene 5453 [Source:MGI Symbol;Acc:MGI:3648523]
50. Pin4 ENSMUSG00000079480 6 0.747 - - 0.747 - - - protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:MGI Symbol;Acc:MGI:1916963]
51. Adora3 ENSMUSG00000000562 10 0.746 - - 0.746 - - - adenosine A3 receptor [Source:MGI Symbol;Acc:MGI:104847]
52. Gm8724 ENSMUSG00000057370 23 0.744 - - 0.744 - - - predicted pseudogene 8724 [Source:MGI Symbol;Acc:MGI:3644570]
53. 9330154J02Rik ENSMUSG00000056031 14 0.742 - - 0.742 - - - RIKEN cDNA 9330154J02 gene [Source:MGI Symbol;Acc:MGI:3045244]
54. Snora74a ENSMUSG00000065649 5 0.742 - - 0.742 - - - small nucleolar RNA, H/ACA box 74A [Source:MGI Symbol;Acc:MGI:3646921]
55. Trpa1 ENSMUSG00000032769 4 0.742 - - 0.742 - - - transient receptor potential cation channel, subfamily A, member 1 [Source:MGI Symbol;Acc:MGI:3522699]
56. Catsperd ENSMUSG00000040828 9 0.742 - - 0.742 - - - cation channel sperm associated auxiliary subunit delta [Source:MGI Symbol;Acc:MGI:2147030]
57. Prickle4 ENSMUSG00000096549 1 0.742 - - 0.742 - - - prickle planar cell polarity protein 4 [Source:MGI Symbol;Acc:MGI:2685785]
58. Bco2 ENSMUSG00000032066 4 0.742 - - 0.742 - - - beta-carotene oxygenase 2 [Source:MGI Symbol;Acc:MGI:2177469]
59. Aldh3b1 ENSMUSG00000024885 10 0.742 - - 0.742 - - - aldehyde dehydrogenase 3 family, member B1 [Source:MGI Symbol;Acc:MGI:1914939]
60. Zfp146 ENSMUSG00000037029 9 0.742 - - 0.742 - - - zinc finger protein 146 [Source:MGI Symbol;Acc:MGI:1347092]
61. Gm13414 ENSMUSG00000087635 11 0.74 0.740 - - - - - predicted gene 13414 [Source:MGI Symbol;Acc:MGI:3652154]
62. P2ry13 ENSMUSG00000036362 46 0.739 - - 0.739 - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
63. Dsc3 ENSMUSG00000059898 10 0.739 - - 0.739 - - - desmocollin 3 [Source:MGI Symbol;Acc:MGI:1194993]
64. Speer7-ps1 Speer7-ps1 5 0.738 - - - - 0.738 -
65. Gm6890 ENSMUSG00000079532 1 0.738 - - - - 0.738 - predicted gene 6890 [Source:MGI Symbol;Acc:MGI:3645826]
66. Tnfsf11 ENSMUSG00000022015 1 0.738 - - - - 0.738 - tumor necrosis factor (ligand) superfamily, member 11 [Source:MGI Symbol;Acc:MGI:1100089]
67. Gm7148 Gm7148 1 0.738 - - - - 0.738 -
68. Gm12867 ENSMUSG00000086683 1 0.738 - - - - 0.738 - predicted gene 12867 [Source:MGI Symbol;Acc:MGI:3651003]
69. 4930548H24Rik ENSMUSG00000029138 3 0.738 - - - - 0.738 - RIKEN cDNA 4930548H24 gene [Source:MGI Symbol;Acc:MGI:1914906]
70. Gm5883 ENSMUSG00000083713 2 0.738 - - - - 0.738 - predicted gene 5883 [Source:MGI Symbol;Acc:MGI:3644644]
71. Gdpd3 ENSMUSG00000030703 14 0.738 - - - - 0.738 - glycerophosphodiester phosphodiesterase domain containing 3 [Source:MGI Symbol;Acc:MGI:1915866]
72. D130043K22Rik ENSMUSG00000006711 5 0.738 - - - - 0.738 - RIKEN cDNA D130043K22 gene [Source:MGI Symbol;Acc:MGI:3036268]
73. 4932438H23Rik ENSMUSG00000039851 1 0.738 - - - - 0.738 - RIKEN cDNA 4932438H23 gene [Source:MGI Symbol;Acc:MGI:1921637]
74. Abca15 ENSMUSG00000054746 3 0.738 - - - - 0.738 - ATP-binding cassette, sub-family A (ABC1), member 15 [Source:MGI Symbol;Acc:MGI:2388709]
75. Gm14877 ENSMUSG00000082174 1 0.738 - - - - 0.738 - predicted gene 14877 [Source:MGI Symbol;Acc:MGI:3708097]
76. Gm12703 ENSMUSG00000052767 2 0.738 - - - - 0.738 - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
77. Gm15659 ENSMUSG00000083242 6 0.738 - - - - 0.738 - predicted gene 15659 [Source:MGI Symbol;Acc:MGI:3801822]
78. Mir199b ENSMUSG00000092807 4 0.738 - - - - 0.738 - microRNA 199b [Source:MGI Symbol;Acc:MGI:2676865]
79. Fcgr2b ENSMUSG00000026656 5 0.738 - - - - 0.738 - Fc receptor, IgG, low affinity IIb [Source:MGI Symbol;Acc:MGI:95499]
80. Fam228a ENSMUSG00000079177 14 0.738 - - - - 0.738 - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
81. Gm8302 ENSMUSG00000081773 4 0.738 - - - - 0.738 - predicted gene 8302 [Source:MGI Symbol;Acc:MGI:3643802]
82. Olfr885 ENSMUSG00000096424 2 0.738 - - - - 0.738 - olfactory receptor 885 [Source:MGI Symbol;Acc:MGI:3030719]
83. Ltb4r1 ENSMUSG00000046908 8 0.738 - - - - 0.738 - leukotriene B4 receptor 1 [Source:MGI Symbol;Acc:MGI:1309472]
84. Impdh2 ENSMUSG00000062867 107 0.738 - - - - 0.738 - inosine monophosphate dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:109367]
85. Bfsp2 ENSMUSG00000032556 4 0.738 - - - - 0.738 - beaded filament structural protein 2, phakinin [Source:MGI Symbol;Acc:MGI:1333828]
86. 4631405K08Rik ENSMUSG00000097850 14 0.738 - - - - 0.738 - RIKEN cDNA 4631405K08 gene [Source:MGI Symbol;Acc:MGI:1918050]
87. Akap2 ENSMUSG00000038729 3 0.738 - - - - 0.738 - A kinase (PRKA) anchor protein 2 [Source:MGI Symbol;Acc:MGI:1306795]
88. mmu-mir-6945 mmu-mir-6945 1 0.738 - - - - 0.738 -
89. Gm16023 ENSMUSG00000086682 7 0.737 - - 0.737 - - - predicted gene 16023 [Source:MGI Symbol;Acc:MGI:3802146]
90. 4930451C15Rik 4930451C15Rik 12 0.736 - - 0.736 - - -
91. Gm2449 ENSMUSG00000097223 1 0.736 - - 0.736 - - - predicted gene 2449 [Source:MGI Symbol;Acc:MGI:3780616]
92. Gm15151 ENSMUSG00000081331 2 0.736 - - 0.736 - - - predicted gene 15151 [Source:MGI Symbol;Acc:MGI:3705644]
93. Crlf1 ENSMUSG00000007888 102 0.732 - - - - - 0.732 cytokine receptor-like factor 1 [Source:MGI Symbol;Acc:MGI:1340030]
94. Gm12857 ENSMUSG00000081233 8 0.73 - - 0.730 - - - predicted gene 12857 [Source:MGI Symbol;Acc:MGI:3652230]
95. Mansc1 ENSMUSG00000032718 9 0.73 - - 0.730 - - - MANSC domain containing 1 [Source:MGI Symbol;Acc:MGI:1914979]
96. Gm8174 ENSMUSG00000052482 73 0.724 - - 0.724 - - - predicted gene 8174 [Source:MGI Symbol;Acc:MGI:3648322]
97. Casp1 ENSMUSG00000025888 13 0.724 - - 0.724 - - - caspase 1 [Source:MGI Symbol;Acc:MGI:96544]
98. Gm23458 ENSMUSG00000065191 51 0.715 - - - - 0.715 - predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
99. Plau ENSMUSG00000021822 21 0.711 - - 0.711 - - - plasminogen activator, urokinase [Source:MGI Symbol;Acc:MGI:97611]
100. Rarb ENSMUSG00000017491 474 0.709 - - - - - 0.709 retinoic acid receptor, beta [Source:MGI Symbol;Acc:MGI:97857]

There are 8 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA