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Results for Col3a1

Gene Name Gene ID Reads Annotation
Col3a1 ENSMUSG00000026043 44356 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]







Genes with expression patterns similar to Col3a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col3a1 ENSMUSG00000026043 44356 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
2. Postn ENSMUSG00000027750 3911 2.34 - 0.704 0.764 - 0.872 - periostin, osteoblast specific factor [Source:MGI Symbol;Acc:MGI:1926321]
3. Col1a2 ENSMUSG00000029661 27258 1.641 - - 0.745 - 0.896 - collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
4. Col1a1 ENSMUSG00000001506 38394 0.901 - - - - 0.901 - collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
5. Rian ENSMUSG00000097451, ENSMUSG00000107391 6847 0.881 0.881 - - - - - RNA imprinted and accumulated in nucleus [Source:MGI Symbol;Acc:MGI:1922995]
6. Arl1 ENSMUSG00000060904 5503 0.867 0.867 - - - - - ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
7. Lamp2 ENSMUSG00000016534 3440 0.866 0.866 - - - - - lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
8. Meg3 ENSMUSG00000021268 38009 0.866 - - - - 0.866 - maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
9. Sh3bgrl ENSMUSG00000031246 3900 0.86 0.860 - - - - - SH3-binding domain glutamic acid-rich protein like [Source:MGI Symbol;Acc:MGI:1930849]
10. Isca2 ENSMUSG00000021241 4922 0.859 0.859 - - - - - iron-sulfur cluster assembly 2 [Source:MGI Symbol;Acc:MGI:1921566]
11. Dctn1 ENSMUSG00000031865 11800 0.859 0.859 - - - - - dynactin 1 [Source:MGI Symbol;Acc:MGI:107745]
12. Serinc1 ENSMUSG00000019877 7383 0.857 0.857 - - - - - serine incorporator 1 [Source:MGI Symbol;Acc:MGI:1926228]
13. Egln2 ENSMUSG00000058709 2852 0.857 0.857 - - - - - egl-9 family hypoxia-inducible factor 2 [Source:MGI Symbol;Acc:MGI:1932287]
14. Sik2 ENSMUSG00000037112 1369 0.856 0.856 - - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
15. Med1 ENSMUSG00000018160 2865 0.855 0.855 - - - - - mediator complex subunit 1 [Source:MGI Symbol;Acc:MGI:1100846]
16. Rps6kb1 ENSMUSG00000020516 4554 0.855 0.855 - - - - - ribosomal protein S6 kinase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1270849]
17. Prpf8 ENSMUSG00000020850 7668 0.854 0.854 - - - - - pre-mRNA processing factor 8 [Source:MGI Symbol;Acc:MGI:2179381]
18. Sdr39u1 ENSMUSG00000022223 4051 0.853 0.853 - - - - - short chain dehydrogenase/reductase family 39U, member 1 [Source:MGI Symbol;Acc:MGI:1916876]
19. Acad9 ENSMUSG00000027710 2657 0.853 0.853 - - - - - acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
20. Samd4 ENSMUSG00000021838 1321 0.851 0.851 - - - - - sterile alpha motif domain containing 4 [Source:MGI Symbol;Acc:MGI:1921730]
21. Rab11a ENSMUSG00000004771 5656 0.851 0.851 - - - - - RAB11A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858202]
22. Arhgef2 ENSMUSG00000028059 3179 0.85 0.850 - - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
23. Dtwd2 ENSMUSG00000024505 830 0.849 0.849 - - - - - DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
24. Ppp1r9b ENSMUSG00000038976 4099 0.849 0.849 - - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
25. Plekha1 ENSMUSG00000040268 3807 0.848 0.848 - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:MGI Symbol;Acc:MGI:2442213]
26. Mrps25 ENSMUSG00000014551 1972 0.848 0.848 - - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
27. Luzp1 ENSMUSG00000001089 2070 0.847 0.847 - - - - - leucine zipper protein 1 [Source:MGI Symbol;Acc:MGI:107629]
28. Plec ENSMUSG00000022565 2555 0.847 0.847 - - - - - plectin [Source:MGI Symbol;Acc:MGI:1277961]
29. Ccdc34 ENSMUSG00000027160 5334 0.847 0.847 - - - - - coiled-coil domain containing 34 [Source:MGI Symbol;Acc:MGI:1915451]
30. Irak1 ENSMUSG00000031392 3219 0.847 0.847 - - - - - interleukin-1 receptor-associated kinase 1 [Source:MGI Symbol;Acc:MGI:107420]
31. Rps6ka1 ENSMUSG00000003644 1196 0.846 0.846 - - - - - ribosomal protein S6 kinase polypeptide 1 [Source:MGI Symbol;Acc:MGI:104558]
32. Abhd17c ENSMUSG00000038459 2034 0.846 0.846 - - - - - abhydrolase domain containing 17C [Source:MGI Symbol;Acc:MGI:1917428]
33. Chmp5 ENSMUSG00000028419 5927 0.846 0.846 - - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
34. Picalm ENSMUSG00000039361 3646 0.846 0.846 - - - - - phosphatidylinositol binding clathrin assembly protein [Source:MGI Symbol;Acc:MGI:2385902]
35. Gm15662 Gm15662 1356 0.845 0.845 - - - - -
36. Chmp6 ENSMUSG00000025371 1369 0.845 0.845 - - - - - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
37. Lsm4 ENSMUSG00000031848, ENSMUSG00000110900 4991 0.845 0.845 - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1354692]
38. Gm3244 1303 0.845 0.845 - - - - - predicted pseudogene 3244
39. Rgs12 ENSMUSG00000029101 3712 0.845 0.845 - - - - - regulator of G-protein signaling 12 [Source:MGI Symbol;Acc:MGI:1918979]
40. Lum ENSMUSG00000036446 1992 0.845 - - - - 0.845 - lumican [Source:MGI Symbol;Acc:MGI:109347]
41. Sgol2 Sgol2 2618 0.845 0.845 - - - - -
42. Nnt ENSMUSG00000025453, ENSMUSG00000116207 2284 0.845 0.845 - - - - - nicotinamide nucleotide transhydrogenase [Source:MGI Symbol;Acc:MGI:109279]
43. Snrpa1 ENSMUSG00000030512 3270 0.844 0.844 - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:MGI Symbol;Acc:MGI:1916231]
44. Tnrc18 ENSMUSG00000039477 1051 0.844 0.844 - - - - - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
45. Opa1 ENSMUSG00000038084 1963 0.843 0.843 - - - - - OPA1, mitochondrial dynamin like GTPase [Source:MGI Symbol;Acc:MGI:1921393]
46. Wnt5a ENSMUSG00000021994 2387 0.842 0.842 - - - - - wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
47. Taf15 ENSMUSG00000020680 2417 0.842 0.842 - - - - - TATA-box binding protein associated factor 15 [Source:MGI Symbol;Acc:MGI:1917689]
48. Slc2a3 ENSMUSG00000003153 5785 0.841 0.841 - - - - - solute carrier family 2 (facilitated glucose transporter), member 3 [Source:MGI Symbol;Acc:MGI:95757]
49. Arl2 ENSMUSG00000024944 4376 0.841 0.841 - - - - - ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
50. 2610008E11Rik ENSMUSG00000060301 1912 0.841 0.841 - - - - - RIKEN cDNA 2610008E11 gene [Source:MGI Symbol;Acc:MGI:1919378]
51. Wdr60 ENSMUSG00000042050 672 0.841 0.841 - - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
52. Jam3 ENSMUSG00000031990 5781 0.841 0.841 - - - - - junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
53. Fam175a 970 0.84 0.840 - - - - - family with sequence similarity 175, member A, transcript variant X2
54. Cnnm3 ENSMUSG00000001138 1820 0.84 0.840 - - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
55. Amotl2 ENSMUSG00000032531 4205 0.84 0.840 - - - - - angiomotin-like 2 [Source:MGI Symbol;Acc:MGI:1929286]
56. Mfap3 ENSMUSG00000020522 5793 0.84 0.840 - - - - - microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
57. Fam192a ENSMUSG00000031774 2091 0.84 0.840 - - - - - family with sequence similarity 192, member A [Source:MGI Symbol;Acc:MGI:1919637]
58. Psmd3 ENSMUSG00000017221 4266 0.839 0.839 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 [Source:MGI Symbol;Acc:MGI:98858]
59. Zfp287 ENSMUSG00000005267 876 0.839 0.839 - - - - - zinc finger protein 287 [Source:MGI Symbol;Acc:MGI:2176561]
60. Ttpal ENSMUSG00000017679 922 0.839 0.839 - - - - - tocopherol (alpha) transfer protein-like [Source:MGI Symbol;Acc:MGI:1923330]
61. Syt13 ENSMUSG00000027220 679 0.839 0.839 - - - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
62. Psmd13 ENSMUSG00000025487 5365 0.839 0.839 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:MGI Symbol;Acc:MGI:1345192]
63. Rpl29 ENSMUSG00000048758 10651 0.838 0.838 - - - - - ribosomal protein L29 [Source:MGI Symbol;Acc:MGI:99687]
64. Dyrk3 ENSMUSG00000016526 576 0.838 0.838 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 [Source:MGI Symbol;Acc:MGI:1330300]
65. 0610005C13Rik ENSMUSG00000109644 478 0.838 0.838 - - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
66. Zfp850 ENSMUSG00000096916 401 0.838 0.838 - - - - - zinc finger protein 850 [Source:MGI Symbol;Acc:MGI:3036281]
67. Dlg4 ENSMUSG00000020886 393 0.838 0.838 - - - - - discs large MAGUK scaffold protein 4 [Source:MGI Symbol;Acc:MGI:1277959]
68. Rmrp ENSMUSG00000088088 349 0.838 0.838 - - - - - RNA component of mitochondrial RNAase P [Source:MGI Symbol;Acc:MGI:97937]
69. Vps36 ENSMUSG00000031479 2501 0.838 0.838 - - - - - vacuolar protein sorting 36 [Source:MGI Symbol;Acc:MGI:1917410]
70. Samsn1 ENSMUSG00000022876 406 0.838 0.838 - - - - - SAM domain, SH3 domain and nuclear localization signals, 1 [Source:MGI Symbol;Acc:MGI:1914992]
71. Pmepa1 ENSMUSG00000038400 1294 0.837 0.837 - - - - - prostate transmembrane protein, androgen induced 1 [Source:MGI Symbol;Acc:MGI:1929600]
72. Abcd1 ENSMUSG00000031378 696 0.837 0.837 - - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
73. Bai3 Bai3 552 0.837 0.837 - - - - -
74. Zfp367 ENSMUSG00000044934 1130 0.837 0.837 - - - - - zinc finger protein 367 [Source:MGI Symbol;Acc:MGI:2442266]
75. Mrpl9 ENSMUSG00000028140 1835 0.836 0.836 - - - - - mitochondrial ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:2137211]
76. Pfkl ENSMUSG00000020277 2200 0.836 0.836 - - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
77. Msantd4 ENSMUSG00000041124 1975 0.835 0.835 - - - - - Myb/SANT-like DNA-binding domain containing 4 with coiled-coils [Source:MGI Symbol;Acc:MGI:1925350]
78. Snx10 ENSMUSG00000038301 2115 0.835 0.835 - - - - - sorting nexin 10 [Source:MGI Symbol;Acc:MGI:1919232]
79. Bcl2l12 ENSMUSG00000003190 2295 0.835 0.835 - - - - - BCL2-like 12 (proline rich) [Source:MGI Symbol;Acc:MGI:1922986]
80. Tpd52 ENSMUSG00000027506 1885 0.835 0.835 - - - - - tumor protein D52 [Source:MGI Symbol;Acc:MGI:107749]
81. Trim8 ENSMUSG00000025034 1494 0.834 0.834 - - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
82. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 15785 0.834 - - - - 0.834 - delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
83. Pabpc4 ENSMUSG00000011257 4240 0.833 0.833 - - - - - poly(A) binding protein, cytoplasmic 4 [Source:MGI Symbol;Acc:MGI:2385206]
84. Ssr3 ENSMUSG00000027828 4590 0.833 0.833 - - - - - signal sequence receptor, gamma [Source:MGI Symbol;Acc:MGI:1914687]
85. Rcl1 ENSMUSG00000024785 1676 0.833 0.833 - - - - - RNA terminal phosphate cyclase-like 1 [Source:MGI Symbol;Acc:MGI:1913275]
86. Cln3 ENSMUSG00000030720 1100 0.833 0.833 - - - - - ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]
87. Aurkaip1 ENSMUSG00000065990 4804 0.832 0.832 - - - - - aurora kinase A interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913327]
88. Dact1 ENSMUSG00000044548 10579 0.83 - - 0.830 - - - dishevelled-binding antagonist of beta-catenin 1 [Source:MGI Symbol;Acc:MGI:1891740]
89. Tbc1d16 ENSMUSG00000039976 4754 0.827 0.827 - - - - - TBC1 domain family, member 16 [Source:MGI Symbol;Acc:MGI:2652878]
90. Aars ENSMUSG00000031960 9515 0.827 0.827 - - - - - alanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2384560]
91. Neurog2 ENSMUSG00000027967 670 0.826 0.826 - - - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
92. Smad3 ENSMUSG00000032402 3672 0.825 0.825 - - - - - SMAD family member 3 [Source:MGI Symbol;Acc:MGI:1201674]
93. Romo1 ENSMUSG00000067847 9607 0.824 0.824 - - - - - reactive oxygen species modulator 1 [Source:MGI Symbol;Acc:MGI:1914317]
94. Tmed10 ENSMUSG00000021248 13770 0.823 0.823 - - - - - transmembrane p24 trafficking protein 10 [Source:MGI Symbol;Acc:MGI:1915831]
95. Eif4a1 ENSMUSG00000059796 10496 0.823 0.823 - - - - - eukaryotic translation initiation factor 4A1 [Source:MGI Symbol;Acc:MGI:95303]
96. Rassf4 ENSMUSG00000042129 1399 0.823 0.823 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
97. Tmcc1 ENSMUSG00000030126 2753 0.818 0.818 - - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
98. Fez1 ENSMUSG00000032118 2537 0.818 0.818 - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
99. Vps28 ENSMUSG00000115987 3187 0.817 0.817 - - - - - vacuolar protein sorting 28 [Source:MGI Symbol;Acc:MGI:1914164]
100. Ankrd11 ENSMUSG00000035569 7854 0.816 0.816 - - - - - ankyrin repeat domain 11 [Source:MGI Symbol;Acc:MGI:1924337]

There are 43 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA