Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col2a1

Gene Name Gene ID Reads Annotation
Col2a1 ENSMUSG00000022483 6073 collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]







Genes with expression patterns similar to Col2a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col2a1 ENSMUSG00000022483 6073 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
2. Uncx ENSMUSG00000029546 4593 3.979 0.753 0.821 0.806 0.824 0.775 - UNC homeobox [Source:MGI Symbol;Acc:MGI:108013]
3. Pax1 ENSMUSG00000037034 2297 3.942 - 0.701 0.782 0.820 0.770 0.869 paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
4. Col9a1 ENSMUSG00000026147 4752 2.524 - - - 0.889 0.798 0.837 collagen, type IX, alpha 1 [Source:MGI Symbol;Acc:MGI:88465]
5. Foxd1 ENSMUSG00000078302 2176 2.34 0.858 0.771 - 0.711 - - forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
6. Sox9 ENSMUSG00000000567 6545 2.311 - - - 0.791 0.761 0.759 SRY (sex determining region Y)-box 9 [Source:MGI Symbol;Acc:MGI:98371]
7. Pax9 ENSMUSG00000001497 255 2.257 0.707 - 0.765 - - 0.785 paired box 9 [Source:MGI Symbol;Acc:MGI:97493]
8. Meox1 ENSMUSG00000001493 3105 1.574 0.811 - 0.763 - - - mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
9. C1qtnf3 ENSMUSG00000058914 1227 1.496 - - 0.789 - - 0.707 C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
10. Foxc1 ENSMUSG00000050295 5789 1.475 - - - - 0.730 0.745 forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
11. Tcf15 ENSMUSG00000068079 1156 1.453 - 0.727 0.726 - - - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
12. Nkd2 ENSMUSG00000021567 1510 0.825 - - 0.825 - - - naked cuticle 2 [Source:MGI Symbol;Acc:MGI:1919543]
13. Shh ENSMUSG00000002633 468 0.821 - - 0.821 - - - sonic hedgehog [Source:MGI Symbol;Acc:MGI:98297]
14. Ablim3 ENSMUSG00000032735 497 0.778 - - 0.778 - - - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
15. T ENSMUSG00000062327 99 0.773 - - 0.773 - - - brachyury, T-box transcription factor T [Source:MGI Symbol;Acc:MGI:98472]
16. Tnnt2 ENSMUSG00000026414 1982 0.756 - - 0.756 - - - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
17. Irx2 ENSMUSG00000001504 819 0.755 - - - - 0.755 - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
18. Fat3 ENSMUSG00000074505 655 0.754 0.754 - - - - - FAT atypical cadherin 3 [Source:MGI Symbol;Acc:MGI:2444314]
19. Ebf2 ENSMUSG00000022053 834 0.752 0.752 - - - - - early B cell factor 2 [Source:MGI Symbol;Acc:MGI:894332]
20. Acan ENSMUSG00000030607 13 0.746 - - 0.746 - - - aggrecan [Source:MGI Symbol;Acc:MGI:99602]
21. Klhl40 ENSMUSG00000074001 87 0.745 - - 0.745 - - - kelch-like 40 [Source:MGI Symbol;Acc:MGI:1919580]
22. Fibin ENSMUSG00000074971 907 0.742 0.742 - - - - - fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
23. Synpo2l ENSMUSG00000039376 565 0.741 - - 0.741 - - - synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
24. Fgf4 ENSMUSG00000050917 68 0.737 - - 0.737 - - - fibroblast growth factor 4 [Source:MGI Symbol;Acc:MGI:95518]
25. Dmrt2 ENSMUSG00000048138 949 0.733 - - - - - 0.733 doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
26. Ldb3 ENSMUSG00000021798 170 0.732 - - 0.732 - - - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
27. Car3 ENSMUSG00000027559 550 0.731 - 0.731 - - - - carbonic anhydrase 3 [Source:MGI Symbol;Acc:MGI:88270]
28. Itgb1bp2 ENSMUSG00000031312 76 0.73 - - 0.730 - - - integrin beta 1 binding protein 2 [Source:MGI Symbol;Acc:MGI:1353420]
29. Foxl1 ENSMUSG00000097084 30 0.729 - - 0.729 - - - forkhead box L1 [Source:MGI Symbol;Acc:MGI:1347469]
30. Cdkn1a ENSMUSG00000023067 2571 0.729 0.729 - - - - - cyclin-dependent kinase inhibitor 1A (P21) [Source:MGI Symbol;Acc:MGI:104556]
31. Arpp21 ENSMUSG00000032503 375 0.725 0.725 - - - - - cyclic AMP-regulated phosphoprotein, 21 [Source:MGI Symbol;Acc:MGI:107562]
32. Ntn1 ENSMUSG00000020902 1175 0.723 0.723 - - - - - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
33. Myh3 ENSMUSG00000020908 1729 0.722 - - 0.722 - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
34. Myoz2 ENSMUSG00000028116 63 0.719 - - 0.719 - - - myozenin 2 [Source:MGI Symbol;Acc:MGI:1913063]
35. Vtn ENSMUSG00000017344 397 0.719 0.719 - - - - - vitronectin [Source:MGI Symbol;Acc:MGI:98940]
36. Tppp3 ENSMUSG00000014846 3267 0.719 0.719 - - - - - tubulin polymerization-promoting protein family member 3 [Source:MGI Symbol;Acc:MGI:1915221]
37. Col11a2 ENSMUSG00000024330 55 0.713 - - 0.713 - - - collagen, type XI, alpha 2 [Source:MGI Symbol;Acc:MGI:88447]
38. Loxl4 ENSMUSG00000025185 21 0.712 - - 0.712 - - - lysyl oxidase-like 4 [Source:MGI Symbol;Acc:MGI:1914823]
39. Col9a2 ENSMUSG00000028626 672 0.709 - - - 0.709 - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
40. Cdh15 ENSMUSG00000031962 318 0.707 - - 0.707 - - - cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
41. Casq2 ENSMUSG00000027861 587 0.703 - - 0.703 - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
42. Slc12a2 ENSMUSG00000024597 5102 0.702 0.702 - - - - - solute carrier family 12, member 2 [Source:MGI Symbol;Acc:MGI:101924]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA