Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col28a1

Gene Name Gene ID Reads Annotation
Col28a1 ENSMUSG00000068794 6 collagen, type XXVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2685312]







Genes with expression patterns similar to Col28a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col28a1 ENSMUSG00000068794 6 2 - - - - 1.000 1.000 collagen, type XXVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2685312]
2. Mmp28 ENSMUSG00000020682 22 0.982 - - - - - 0.982 matrix metallopeptidase 28 (epilysin) [Source:MGI Symbol;Acc:MGI:2153062]
3. Capn15 ENSMUSG00000037326 23 0.976 - - - - - 0.976 calpain 15 [Source:MGI Symbol;Acc:MGI:1355075]
4. Plcd4 ENSMUSG00000026173 6 0.976 - - - - - 0.976 phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
5. Gm15366 ENSMUSG00000080726 11 0.976 - - - - - 0.976 predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
6. Gm13604 ENSMUSG00000083910 10 0.976 - - - - - 0.976 predicted gene 13604 [Source:MGI Symbol;Acc:MGI:3652203]
7. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 0.976 - - - - - 0.976 predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
8. D5Ertd577e ENSMUSG00000070677 7 0.976 - - - - - 0.976 DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
9. 3110099E03Rik ENSMUSG00000085582 57 0.976 - - - - - 0.976 RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
10. Gm27001 ENSMUSG00000097963 3 0.976 - - - - - 0.976 predicted gene, 27001 [Source:MGI Symbol;Acc:MGI:5504116]
11. Rpl17-ps5 ENSMUSG00000081855 19 0.976 - - - - - 0.976 ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
12. Avpr1b ENSMUSG00000026432 4 0.976 - - - - - 0.976 arginine vasopressin receptor 1B [Source:MGI Symbol;Acc:MGI:1347010]
13. Rplp0-ps1 ENSMUSG00000081640 5 0.976 - - - - - 0.976 ribosomal protein, large, P0, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3648599]
14. Gm2108 ENSMUSG00000092031 8 0.976 - - - - - 0.976 predicted gene 2108 [Source:MGI Symbol;Acc:MGI:3780276]
15. Gm26606 ENSMUSG00000097337 23 0.972 - - - - - 0.972 predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
16. Casp4 ENSMUSG00000033538 15 0.971 - - - - - 0.971 caspase 4, apoptosis-related cysteine peptidase [Source:MGI Symbol;Acc:MGI:107700]
17. AA467197 ENSMUSG00000033213, ENSMUSG00000110868 7 0.962 - - - - - 0.962 expressed sequence AA467197 [Source:MGI Symbol;Acc:MGI:3034182]
18. Kcna4 ENSMUSG00000042604 14 0.959 - - - - - 0.959 potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
19. Mir138-1 ENSMUSG00000065414 14 0.953 - - - - - 0.953 microRNA 138-1 [Source:MGI Symbol;Acc:MGI:2676823]
20. Kynu ENSMUSG00000026866 84 0.95 - - - - - 0.950 kynureninase (L-kynurenine hydrolase) [Source:MGI Symbol;Acc:MGI:1918039]
21. Ly6a ENSMUSG00000075602 17 0.949 - - - - - 0.949 lymphocyte antigen 6 complex, locus A [Source:MGI Symbol;Acc:MGI:107527]
22. 2900079G21Rik ENSMUSG00000087038 5 0.947 - - - - - 0.947 RIKEN cDNA 2900079G21 gene [Source:MGI Symbol;Acc:MGI:1920268]
23. Scnn1g ENSMUSG00000000216 14 0.943 - - - - - 0.943 sodium channel, nonvoltage-gated 1 gamma [Source:MGI Symbol;Acc:MGI:104695]
24. Gm7879 ENSMUSG00000033036 6 0.929 - - - - - 0.929 predicted pseudogene 7879 [Source:MGI Symbol;Acc:MGI:3645078]
25. Hist1h2ad ENSMUSG00000071478 18 0.927 - - - - - 0.927 histone cluster 1, H2ad [Source:MGI Symbol;Acc:MGI:2448289]
26. Gm12434 ENSMUSG00000085660 4 0.925 - - - - 0.925 - predicted gene 12434 [Source:MGI Symbol;Acc:MGI:3649453]
27. Gm26902 ENSMUSG00000097558 2 0.925 - - - - 0.925 - predicted gene, 26902 [Source:MGI Symbol;Acc:MGI:5477396]
28. Gm8425 ENSMUSG00000091786 3 0.925 - - - - 0.925 - predicted gene 8425 [Source:MGI Symbol;Acc:MGI:3645899]
29. RP23-93M1.2 RP23-93M1.2 2 0.925 - - - - 0.925 -
30. Gm25995 ENSMUSG00000093137 2 0.925 - - - - 0.925 - predicted gene, 25995 [Source:MGI Symbol;Acc:MGI:5455772]
31. Psg21 ENSMUSG00000070796 3 0.925 - - - - 0.925 - pregnancy-specific glycoprotein 21 [Source:MGI Symbol;Acc:MGI:1891353]
32. Snai3 ENSMUSG00000006587 3 0.925 - - - - 0.925 - snail family zinc finger 3 [Source:MGI Symbol;Acc:MGI:1353563]
33. Gm20647 ENSMUSG00000093400 1 0.925 - - - - 0.925 - predicted gene 20647 [Source:MGI Symbol;Acc:MGI:5313094]
34. Aipl1 ENSMUSG00000040554 9 0.925 - - - - 0.925 - aryl hydrocarbon receptor-interacting protein-like 1 [Source:MGI Symbol;Acc:MGI:2148800]
35. Ltb4r2 ENSMUSG00000040432 6 0.925 - - - - 0.925 - leukotriene B4 receptor 2 [Source:MGI Symbol;Acc:MGI:1888501]
36. Klhl38 ENSMUSG00000022357, ENSMUSG00000116332 3 0.925 - - - - 0.925 - kelch-like 38 [Source:MGI Symbol;Acc:MGI:3045310]
37. Col6a6 ENSMUSG00000043719 8 0.925 - - - - 0.925 - collagen, type VI, alpha 6 [Source:MGI Symbol;Acc:MGI:2444259]
38. Gm26442 ENSMUSG00000064522 1 0.925 - - - - 0.925 - predicted gene, 26442 [Source:MGI Symbol;Acc:MGI:5456219]
39. Gm14274 ENSMUSG00000083793 1 0.925 - - - - 0.925 - predicted gene 14274 [Source:MGI Symbol;Acc:MGI:3649603]
40. 4930562D21Rik ENSMUSG00000086608 5 0.925 - - - - 0.925 - RIKEN cDNA 4930562D21 gene [Source:MGI Symbol;Acc:MGI:1922574]
41. Gm13743 ENSMUSG00000083688 5 0.925 - - - - 0.925 - predicted gene 13743 [Source:MGI Symbol;Acc:MGI:3650802]
42. Snord13 ENSMUSG00000088252 27 0.912 - - - - - 0.912 small nucleolar RNA, C/D box 13 [Source:MGI Symbol;Acc:MGI:3819521]
43. Fgf5 ENSMUSG00000029337 249 0.909 - - - - - 0.909 fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
44. Asah2 ENSMUSG00000024887 54 0.907 - - - - - 0.907 N-acylsphingosine amidohydrolase 2 [Source:MGI Symbol;Acc:MGI:1859310]
45. Sim2 ENSMUSG00000062713 63 0.905 - - - - - 0.905 single-minded family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:98307]
46. Hoxa3 ENSMUSG00000079560 57 0.905 - - - - - 0.905 homeobox A3 [Source:MGI Symbol;Acc:MGI:96175]
47. Ptger2 ENSMUSG00000037759 22 0.9 - - - - - 0.900 prostaglandin E receptor 2 (subtype EP2) [Source:MGI Symbol;Acc:MGI:97794]
48. Gm9143 ENSMUSG00000080774 40 0.896 - - - - - 0.896 predicted gene 9143 [Source:MGI Symbol;Acc:MGI:3643265]
49. F420014N23Rik ENSMUSG00000097331 21 0.895 - - - - - 0.895 RIKEN cDNA F420014N23 gene [Source:MGI Symbol;Acc:MGI:3642477]
50. 1810062O18Rik ENSMUSG00000084925 34 0.895 - - - - - 0.895 RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
51. Tmem69 ENSMUSG00000055900 851 0.892 - - - - - 0.892 transmembrane protein 69 [Source:MGI Symbol;Acc:MGI:3045357]
52. Klf1 ENSMUSG00000054191 97 0.89 - - - - - 0.890 Kruppel-like factor 1 (erythroid) [Source:MGI Symbol;Acc:MGI:1342771]
53. Anxa9 ENSMUSG00000015702 34 0.888 - - - - - 0.888 annexin A9 [Source:MGI Symbol;Acc:MGI:1923711]
54. Myh7b ENSMUSG00000074652 24 0.887 - - - - - 0.887 myosin, heavy chain 7B, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:3710243]
55. Tmem150c ENSMUSG00000050640 52 0.886 - - - - - 0.886 transmembrane protein 150C [Source:MGI Symbol;Acc:MGI:3041258]
56. Pik3r5 ENSMUSG00000020901 40 0.885 - - - - - 0.885 phosphoinositide-3-kinase regulatory subunit 5 [Source:MGI Symbol;Acc:MGI:2443588]
57. Il17b ENSMUSG00000024578 68 0.88 - - - - - 0.880 interleukin 17B [Source:MGI Symbol;Acc:MGI:1928397]
58. B430218F22Rik ENSMUSG00000097411 25 0.878 - - - - - 0.878 RIKEN cDNA B430218F22 gene [Source:MGI Symbol;Acc:MGI:3704413]
59. Gm14115 ENSMUSG00000081971 62 0.874 - - - - - 0.874 predicted gene 14115 [Source:MGI Symbol;Acc:MGI:3652261]
60. Gm3940 ENSMUSG00000078291 36 0.872 - - - - - 0.872 predicted gene 3940 [Source:MGI Symbol;Acc:MGI:3782114]
61. Sh3d21 ENSMUSG00000073758 40 0.87 - - - - - 0.870 SH3 domain containing 21 [Source:MGI Symbol;Acc:MGI:1914188]
62. Gm26575 ENSMUSG00000097926 6 0.866 - - - - 0.866 - predicted gene, 26575 [Source:MGI Symbol;Acc:MGI:5477069]
63. Gpha2 ENSMUSG00000024784, ENSMUSG00000107297 6 0.866 - - - - 0.866 - glycoprotein hormone alpha 2 [Source:MGI Symbol;Acc:MGI:2156541]
64. Eppin ENSMUSG00000017733 3 0.864 - - - - 0.864 - epididymal peptidase inhibitor [Source:MGI Symbol;Acc:MGI:1922776]
65. Fam120aos ENSMUSG00000097059 81 0.864 - - - - - 0.864 family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
66. Vti1a ENSMUSG00000024983 189 0.858 - - - - - 0.858 vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
67. Gm15859 ENSMUSG00000086944 8 0.855 - - - - 0.855 - predicted gene 15859 [Source:MGI Symbol;Acc:MGI:3801904]
68. Ccl12 ENSMUSG00000035352 2 0.855 - - - - 0.855 - chemokine (C-C motif) ligand 12 [Source:MGI Symbol;Acc:MGI:108224]
69. Gm6733 ENSMUSG00000084329 8 0.853 - - - - 0.853 - predicted gene 6733 [Source:MGI Symbol;Acc:MGI:3645402]
70. AW011738 ENSMUSG00000078349 16 0.85 - - - - - 0.850 expressed sequence AW011738 [Source:MGI Symbol;Acc:MGI:2140540]
71. 1700095J07Rik ENSMUSG00000084861 13 0.846 - - - - 0.846 - RIKEN cDNA 1700095J07 gene [Source:MGI Symbol;Acc:MGI:1920824]
72. Gm11738 ENSMUSG00000085511 23 0.843 - - - - - 0.843 predicted gene 11738 [Source:MGI Symbol;Acc:MGI:3650365]
73. Pih1d2 ENSMUSG00000000167 69 0.839 - - - - - 0.839 PIH1 domain containing 2 [Source:MGI Symbol;Acc:MGI:1919864]
74. Gm10069 ENSMUSG00000059659 14 0.839 - - - - 0.839 - predicted gene 10069 [Source:MGI Symbol;Acc:MGI:3641875]
75. Prps1l3 ENSMUSG00000079104 134 0.836 - - - - - 0.836 phosphoribosyl pyrophosphate synthetase 1-like 3 [Source:MGI Symbol;Acc:MGI:3779453]
76. Ptprc ENSMUSG00000026395 57 0.833 - - - - - 0.833 protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
77. RP23-292F17.5 RP23-292F17.5 33 0.833 - - - - - 0.833
78. Gm10489 ENSMUSG00000097444 5 0.827 - - - - 0.827 - predicted gene 10489 [Source:MGI Symbol;Acc:MGI:3704505]
79. Ly6g5b ENSMUSG00000043807 51 0.826 - - - - - 0.826 lymphocyte antigen 6 complex, locus G5B [Source:MGI Symbol;Acc:MGI:2385809]
80. 6230400D17Rik ENSMUSG00000097577 51 0.826 - - - - - 0.826 RIKEN cDNA 6230400D17 gene [Source:MGI Symbol;Acc:MGI:1923383]
81. Thy1 ENSMUSG00000032011 37 0.821 - - - - - 0.821 thymus cell antigen 1, theta [Source:MGI Symbol;Acc:MGI:98747]
82. 4933408J17Rik ENSMUSG00000097407 6 0.818 - - - - 0.818 - RIKEN cDNA 4933408J17 gene [Source:MGI Symbol;Acc:MGI:1921704]
83. 1810059H22Rik ENSMUSG00000108207 50 0.816 - - - - - 0.816 RIKEN cDNA 1810059H22 gene [Source:MGI Symbol;Acc:MGI:1917070]
84. Ccdc17 ENSMUSG00000034035 77 0.814 - - - - - 0.814 coiled-coil domain containing 17 [Source:MGI Symbol;Acc:MGI:1915667]
85. Rnf222 ENSMUSG00000046490 6 0.81 - - - - 0.810 - ring finger protein 222 [Source:MGI Symbol;Acc:MGI:2443227]
86. Igsf10 ENSMUSG00000036334 133 0.808 - - - - - 0.808 immunoglobulin superfamily, member 10 [Source:MGI Symbol;Acc:MGI:1923481]
87. Gm6382 ENSMUSG00000082675 96 0.807 - - - - - 0.807 predicted gene 6382 [Source:MGI Symbol;Acc:MGI:3646438]
88. Gm8379 ENSMUSG00000090618 2 0.807 - - - - 0.807 - predicted gene 8379 [Source:MGI Symbol;Acc:MGI:3646778]
89. Upk1b ENSMUSG00000049436 89 0.806 - - - - - 0.806 uroplakin 1B [Source:MGI Symbol;Acc:MGI:98912]
90. B230209K01Rik B230209K01Rik 4 0.805 - - - - 0.805 -
91. Arsk ENSMUSG00000021592 177 0.804 - - - - - 0.804 arylsulfatase K [Source:MGI Symbol;Acc:MGI:1924291]
92. Pnma3 ENSMUSG00000046287 36 0.802 - - - - - 0.802 paraneoplastic antigen MA3 [Source:MGI Symbol;Acc:MGI:2180565]
93. Mob3c ENSMUSG00000028709 114 0.801 - - - - - 0.801 MOB kinase activator 3C [Source:MGI Symbol;Acc:MGI:2140623]
94. Gm10767 ENSMUSG00000074826 19 0.799 - - - - 0.799 - predicted gene 10767 [Source:MGI Symbol;Acc:MGI:3642136]
95. Gm13394 ENSMUSG00000083773 12 0.797 - - - - 0.797 - predicted gene 13394 [Source:MGI Symbol;Acc:MGI:3651848]
96. Gpr1 ENSMUSG00000046856 10 0.796 - - - - 0.796 - G protein-coupled receptor 1 [Source:MGI Symbol;Acc:MGI:2385324]
97. Pcsk4 ENSMUSG00000020131 76 0.796 - - - - - 0.796 proprotein convertase subtilisin/kexin type 4 [Source:MGI Symbol;Acc:MGI:97514]
98. Fam107a ENSMUSG00000021750 50 0.795 - - - - - 0.795 family with sequence similarity 107, member A [Source:MGI Symbol;Acc:MGI:3041256]
99. Chrdl2 ENSMUSG00000030732 17 0.794 - - - - 0.794 - chordin-like 2 [Source:MGI Symbol;Acc:MGI:1916371]
100. Trim30d ENSMUSG00000057596 9 0.793 - - - - 0.793 - tripartite motif-containing 30D [Source:MGI Symbol;Acc:MGI:3035181]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA