Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col23a1

Gene Name Gene ID Reads Annotation
Col23a1 ENSMUSG00000063564 1546 collagen, type XXIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2653243]







Genes with expression patterns similar to Col23a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col23a1 ENSMUSG00000063564 1546 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XXIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2653243]
2. Ddx52 ENSMUSG00000020677 2667 0.851 - - - - 0.851 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
3. Rab33b ENSMUSG00000027739 702 0.822 - - - - 0.822 - RAB33B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1330805]
4. Lysmd4 ENSMUSG00000043831 336 0.804 - - - - 0.804 - LysM, putative peptidoglycan-binding, domain containing 4 [Source:MGI Symbol;Acc:MGI:1922349]
5. A130010J15Rik ENSMUSG00000079144 763 0.797 - - - - 0.797 - RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
6. Pole2 ENSMUSG00000020974 1305 0.794 - - - - 0.794 - polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
7. Notch1 ENSMUSG00000026923 540 0.782 - - - - 0.782 - notch 1 [Source:MGI Symbol;Acc:MGI:97363]
8. Hs2st1 ENSMUSG00000040151 1928 0.78 - - - - 0.780 - heparan sulfate 2-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1346049]
9. Eif2b2 ENSMUSG00000004788 1257 0.777 - - - - 0.777 - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:MGI Symbol;Acc:MGI:2145118]
10. Bace1 ENSMUSG00000032086 1360 0.77 - - - - 0.770 - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
11. Urm1 ENSMUSG00000069020 1427 0.766 - - - - 0.766 - ubiquitin related modifier 1 [Source:MGI Symbol;Acc:MGI:1915455]
12. Tmem132c ENSMUSG00000034324 2608 0.764 - - - - 0.764 - transmembrane protein 132C [Source:MGI Symbol;Acc:MGI:2443061]
13. Fbxo25 ENSMUSG00000038365 940 0.763 - - - - 0.763 - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
14. Hmga1 ENSMUSG00000046711 2878 0.762 - - - - 0.762 - high mobility group AT-hook 1 [Source:MGI Symbol;Acc:MGI:96160]
15. Nrip1 ENSMUSG00000048490 4367 0.758 - - - - 0.758 - nuclear receptor interacting protein 1 [Source:MGI Symbol;Acc:MGI:1315213]
16. Faf2 ENSMUSG00000025873 1737 0.758 - - - - 0.758 - Fas associated factor family member 2 [Source:MGI Symbol;Acc:MGI:1923827]
17. Epc2 ENSMUSG00000069495 1867 0.753 - - - - 0.753 - enhancer of polycomb homolog 2 [Source:MGI Symbol;Acc:MGI:1278321]
18. Fnbp1 ENSMUSG00000075415 2610 0.75 - - - - 0.750 - formin binding protein 1 [Source:MGI Symbol;Acc:MGI:109606]
19. Ldb3 ENSMUSG00000021798 170 0.75 - - - - 0.750 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
20. Slc25a46 ENSMUSG00000024259 2222 0.743 - - - - 0.743 - solute carrier family 25, member 46 [Source:MGI Symbol;Acc:MGI:1914703]
21. 1810009A15Rik ENSMUSG00000071653 1783 0.741 - - - - 0.741 - RIKEN cDNA 1810009A15 gene [Source:MGI Symbol;Acc:MGI:1913526]
22. Slc12a2 ENSMUSG00000024597 5102 0.74 0.740 - - - - - solute carrier family 12, member 2 [Source:MGI Symbol;Acc:MGI:101924]
23. Aldh9a1 ENSMUSG00000026687 2500 0.739 - - - - 0.739 - aldehyde dehydrogenase 9, subfamily A1 [Source:MGI Symbol;Acc:MGI:1861622]
24. Rab7 ENSMUSG00000079477 4726 0.738 - - - - 0.738 - RAB7, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105068]
25. Rbm6 ENSMUSG00000032582 2568 0.736 - - - - 0.736 - RNA binding motif protein 6 [Source:MGI Symbol;Acc:MGI:1338037]
26. Mnt ENSMUSG00000000282 715 0.732 - - - - 0.732 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
27. Mrps6 ENSMUSG00000039680 1637 0.731 - - - - 0.731 - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
28. Ppp2r5d ENSMUSG00000059409 830 0.729 - - - - 0.729 - protein phosphatase 2, regulatory subunit B', delta [Source:MGI Symbol;Acc:MGI:2388481]
29. Taz ENSMUSG00000009995 1408 0.729 - - - - 0.729 - tafazzin [Source:MGI Symbol;Acc:MGI:109626]
30. Cog8 ENSMUSG00000031916 2102 0.729 - - - - 0.729 - component of oligomeric golgi complex 8 [Source:MGI Symbol;Acc:MGI:2142885]
31. E030013I19Rik ENSMUSG00000086843 118 0.727 - - - - 0.727 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
32. Far1 ENSMUSG00000030759 3201 0.727 - - - - 0.727 - fatty acyl CoA reductase 1 [Source:MGI Symbol;Acc:MGI:1914670]
33. Cyr61 ENSMUSG00000028195 563 0.727 - - - - 0.727 - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
34. Kcnab2 ENSMUSG00000028931 291 0.726 - - - - 0.726 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
35. Tfpt ENSMUSG00000006335 157 0.725 - - - - 0.725 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
36. Rhag ENSMUSG00000023926 119 0.721 - - - - 0.721 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
37. Lhx2 ENSMUSG00000000247 529 0.721 - - - - 0.721 - LIM homeobox protein 2 [Source:MGI Symbol;Acc:MGI:96785]
38. Gm26648 ENSMUSG00000097275 484 0.72 - - - - 0.720 - predicted gene, 26648 [Source:MGI Symbol;Acc:MGI:5477142]
39. Tmem25 ENSMUSG00000002032 100 0.72 - - - - 0.720 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
40. Lpin1 ENSMUSG00000020593 407 0.72 - - - - 0.720 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
41. Pla2g3 ENSMUSG00000034579 79 0.719 - - - - 0.719 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
42. Obfc1 1133 0.719 - - - - 0.719 - oligonucleotide/oligosaccharide-binding fold containing 1, transcript variant X1
43. P4ha1 ENSMUSG00000019916 1600 0.718 - - - - 0.718 - procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:97463]
44. Ampd3 ENSMUSG00000005686 113 0.718 - - - - 0.718 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
45. Pacsin1 ENSMUSG00000040276 185 0.717 - - - - 0.717 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
46. Ccdc126 ENSMUSG00000050786 121 0.717 - - - - 0.717 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
47. Gzmc ENSMUSG00000079186 38 0.717 - - - - 0.717 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
48. Six1 ENSMUSG00000051367 745 0.716 0.716 - - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
49. Tbc1d2 ENSMUSG00000039813 51 0.716 - - - - 0.716 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
50. Jazf1 ENSMUSG00000063568 47 0.716 - - - - 0.716 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
51. Gm5644 ENSMUSG00000100104 76 0.716 - - - - 0.716 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
52. Vmn1r132 ENSMUSG00000074322 39 0.715 - - - - 0.715 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
53. Gm11989 ENSMUSG00000083553 73 0.714 - - - - 0.714 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
54. Katnb1 ENSMUSG00000031787 333 0.714 - - - - 0.714 - katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437]
55. Ttc37 ENSMUSG00000033991 159 0.713 - - - - 0.713 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
56. Kctd10 ENSMUSG00000001098 136 0.713 - - - - 0.713 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
57. Srxn1 ENSMUSG00000032802 244 0.713 - - - - 0.713 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
58. Gm9083 ENSMUSG00000083033 141 0.712 - - - - 0.712 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
59. Zc3h6 ENSMUSG00000042851 135 0.712 - - - - 0.712 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
60. Pmel ENSMUSG00000025359 54 0.709 - - - - 0.709 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
61. Snph ENSMUSG00000027457 95 0.709 - - - - 0.709 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
62. Fkbp11 ENSMUSG00000003355 578 0.709 - - - - 0.709 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
63. Surf2 ENSMUSG00000014873 372 0.708 - - - - 0.708 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
64. Gm14813 ENSMUSG00000082549 69 0.708 - - - - 0.708 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
65. Akap11 ENSMUSG00000022016 2542 0.708 - - - - 0.708 - A kinase (PRKA) anchor protein 11 [Source:MGI Symbol;Acc:MGI:2684060]
66. Wnk4 ENSMUSG00000035112 162 0.706 - - - - 0.706 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
67. Crem ENSMUSG00000063889 328 0.706 - - - - 0.706 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
68. 2610307P16Rik ENSMUSG00000085936 253 0.705 - - - - 0.705 - RIKEN cDNA 2610307P16 gene [Source:MGI Symbol;Acc:MGI:1919768]
69. Gm23913 Gm23913 84 0.705 - - - - 0.705 -
70. Rnf167 ENSMUSG00000040746 1958 0.704 - - - - 0.704 - ring finger protein 167 [Source:MGI Symbol;Acc:MGI:1917760]
71. Meox1 ENSMUSG00000001493 3105 0.704 0.704 - - - - - mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
72. Cpox ENSMUSG00000022742 1757 0.704 - - - - 0.704 - coproporphyrinogen oxidase [Source:MGI Symbol;Acc:MGI:104841]
73. Fam50a ENSMUSG00000001962 2244 0.702 - - - - 0.702 - family with sequence similarity 50, member A [Source:MGI Symbol;Acc:MGI:1351626]
74. Pdcd4 ENSMUSG00000024975 1336 0.701 - - - - 0.701 - programmed cell death 4 [Source:MGI Symbol;Acc:MGI:107490]
75. Ifi30 ENSMUSG00000031838, ENSMUSG00000110777 708 0.7 - - - - 0.700 - interferon gamma inducible protein 30 [Source:NCBI gene;Acc:65972]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA