Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col1a1

Gene Name Gene ID Reads Annotation
Col1a1 ENSMUSG00000001506 38394 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]







Genes with expression patterns similar to Col1a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col1a1 ENSMUSG00000001506 38394 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
2. Col1a2 ENSMUSG00000029661 27258 4.288 0.793 0.892 0.889 - 0.926 0.788 collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
3. Postn ENSMUSG00000027750 3911 2.525 0.744 - 0.920 - 0.861 - periostin, osteoblast specific factor [Source:MGI Symbol;Acc:MGI:1926321]
4. Meg3 ENSMUSG00000021268 38009 2.251 - - 0.802 - 0.743 0.706 maternally expressed 3 [Source:MGI Symbol;Acc:MGI:1202886]
5. Lum ENSMUSG00000036446 1992 1.746 - 0.845 - - 0.901 - lumican [Source:MGI Symbol;Acc:MGI:109347]
6. Pitx1 ENSMUSG00000021506 2270 1.51 - - 0.806 - - 0.704 paired-like homeodomain transcription factor 1 [Source:MGI Symbol;Acc:MGI:107374]
7. Plagl1 ENSMUSG00000019817 23300 1.49 - - 0.752 - 0.738 - pleiomorphic adenoma gene-like 1 [Source:MGI Symbol;Acc:MGI:1100874]
8. Col6a2 ENSMUSG00000020241 2430 1.47 - - 0.755 - 0.715 - collagen, type VI, alpha 2 [Source:MGI Symbol;Acc:MGI:88460]
9. Col3a1 ENSMUSG00000026043 44356 0.901 - - - - 0.901 - collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
10. Gulo ENSMUSG00000034450 92 0.868 - - - - 0.868 - gulonolactone (L-) oxidase [Source:MGI Symbol;Acc:MGI:1353434]
11. Itih2 ENSMUSG00000037254 468 0.862 - - - - 0.862 - inter-alpha trypsin inhibitor, heavy chain 2 [Source:MGI Symbol;Acc:MGI:96619]
12. Anxa2 ENSMUSG00000032231 4432 0.858 - - 0.858 - - - annexin A2 [Source:MGI Symbol;Acc:MGI:88246]
13. Fgb ENSMUSG00000033831 418 0.835 - - - - 0.835 - fibrinogen beta chain [Source:MGI Symbol;Acc:MGI:99501]
14. Asic1 ENSMUSG00000023017 115 0.832 - - 0.832 - - - acid-sensing (proton-gated) ion channel 1 [Source:MGI Symbol;Acc:MGI:1194915]
15. S100a11 ENSMUSG00000027907 7309 0.829 - - 0.829 - - - S100 calcium binding protein A11 [Source:MGI Symbol;Acc:MGI:1338798]
16. Cdh3 ENSMUSG00000061048 2519 0.82 - - 0.820 - - - cadherin 3 [Source:MGI Symbol;Acc:MGI:88356]
17. Runx2 ENSMUSG00000039153 319 0.819 - - 0.819 - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
18. Serpinc1 ENSMUSG00000026715 40 0.816 - - - - 0.816 - serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 [Source:MGI Symbol;Acc:MGI:88095]
19. Dsc2 ENSMUSG00000024331 374 0.816 - - 0.816 - - - desmocollin 2 [Source:MGI Symbol;Acc:MGI:103221]
20. Smtnl2 ENSMUSG00000045667 962 0.808 - - 0.808 - - - smoothelin-like 2 [Source:MGI Symbol;Acc:MGI:2442764]
21. Afp ENSMUSG00000054932 3253 0.802 - - - - 0.802 - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
22. Alb ENSMUSG00000029368 370 0.802 - - - - 0.802 - albumin [Source:MGI Symbol;Acc:MGI:87991]
23. Hmga2 ENSMUSG00000056758 137284 0.8 - - - 0.800 - - high mobility group AT-hook 2 [Source:MGI Symbol;Acc:MGI:101761]
24. Kcnk2 ENSMUSG00000037624 670 0.797 - - 0.797 - - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
25. Ckap4 ENSMUSG00000046841 8611 0.793 - - 0.793 - - - cytoskeleton-associated protein 4 [Source:MGI Symbol;Acc:MGI:2444926]
26. Dlk1 ENSMUSG00000040856, ENSMUSG00000098411 15785 0.79 - - - - 0.790 - delta like non-canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:94900]
27. P4ha2 ENSMUSG00000018906 797 0.787 - - 0.787 - - - procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide [Source:MGI Symbol;Acc:MGI:894286]
28. Itm2a ENSMUSG00000031239 5930 0.779 - - 0.779 - - - integral membrane protein 2A [Source:MGI Symbol;Acc:MGI:107706]
29. Serpina1b ENSMUSG00000071178 482 0.779 - - - - 0.779 - serine (or cysteine) preptidase inhibitor, clade A, member 1B [Source:MGI Symbol;Acc:MGI:891970]
30. Pxmp4 ENSMUSG00000000876 1030 0.779 - - 0.779 - - - peroxisomal membrane protein 4 [Source:MGI Symbol;Acc:MGI:1891701]
31. Serpinh1 ENSMUSG00000070436 21378 0.773 - - 0.773 - - - serine (or cysteine) peptidase inhibitor, clade H, member 1 [Source:MGI Symbol;Acc:MGI:88283]
32. Gucy1a3 318 0.773 - - 0.773 - - - guanylate cyclase 1, soluble, alpha 3, transcript variant X1
33. Tnni1 ENSMUSG00000026418 1139 0.772 - - 0.772 - - - troponin I, skeletal, slow 1 [Source:MGI Symbol;Acc:MGI:105073]
34. Shisa3 ENSMUSG00000050010 5017 0.77 - - - - - 0.770 shisa family member 3 [Source:MGI Symbol;Acc:MGI:3041225]
35. Gm17132 ENSMUSG00000061331 46252 0.77 - - 0.770 - - - predicted gene 17132 [Source:MGI Symbol;Acc:MGI:4937959]
36. Aadac ENSMUSG00000027761 16 0.766 - - - - 0.766 - arylacetamide deacetylase [Source:MGI Symbol;Acc:MGI:1915008]
37. Serpina1a ENSMUSG00000066366 88 0.764 - - - - 0.764 - serine (or cysteine) peptidase inhibitor, clade A, member 1A [Source:MGI Symbol;Acc:MGI:891971]
38. Nrk ENSMUSG00000052854 3163 0.762 - - 0.762 - - - Nik related kinase [Source:MGI Symbol;Acc:MGI:1351326]
39. Ttr ENSMUSG00000061808 1351 0.762 - - - - 0.762 - transthyretin [Source:MGI Symbol;Acc:MGI:98865]
40. Rrbp1 ENSMUSG00000027422 5862 0.76 - - 0.760 - - - ribosome binding protein 1 [Source:MGI Symbol;Acc:MGI:1932395]
41. Scarf2 ENSMUSG00000012017 2585 0.759 - - 0.759 - - - scavenger receptor class F, member 2 [Source:MGI Symbol;Acc:MGI:1858430]
42. 2610203C20Rik 2610203C20Rik 2437 0.759 - - 0.759 - - -
43. Atp2b4 ENSMUSG00000026463 816 0.754 - - 0.754 - - - ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
44. Fam178a 6872 0.754 - - - - - 0.754 family with sequence similarity 178, member A, transcript variant X4
45. Sfrp1 ENSMUSG00000031548 28698 0.752 - - - 0.752 - - secreted frizzled-related protein 1 [Source:MGI Symbol;Acc:MGI:892014]
46. Krt8 ENSMUSG00000049382 2446 0.752 - - 0.752 - - - keratin 8 [Source:MGI Symbol;Acc:MGI:96705]
47. Lhx2 ENSMUSG00000000247 529 0.749 - - 0.749 - - - LIM homeobox protein 2 [Source:MGI Symbol;Acc:MGI:96785]
48. Zfpm2 ENSMUSG00000022306 343 0.748 - - 0.748 - - - zinc finger protein, multitype 2 [Source:MGI Symbol;Acc:MGI:1334444]
49. Serpind1 ENSMUSG00000022766 52 0.742 - - - - 0.742 - serine (or cysteine) peptidase inhibitor, clade D, member 1 [Source:MGI Symbol;Acc:MGI:96051]
50. Adamts9 ENSMUSG00000030022 3704 0.742 - - 0.742 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9 [Source:MGI Symbol;Acc:MGI:1916320]
51. Axl ENSMUSG00000002602 3758 0.74 - - 0.740 - - - AXL receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:1347244]
52. Asgr1 ENSMUSG00000020884 103 0.74 - - 0.740 - - - asialoglycoprotein receptor 1 [Source:MGI Symbol;Acc:MGI:88081]
53. Gpx3 ENSMUSG00000018339 1590 0.738 - - 0.738 - - - glutathione peroxidase 3 [Source:MGI Symbol;Acc:MGI:105102]
54. Nfib ENSMUSG00000008575 7869 0.738 - - - 0.738 - - nuclear factor I/B [Source:MGI Symbol;Acc:MGI:103188]
55. Myof ENSMUSG00000048612 507 0.737 - - 0.737 - - - myoferlin [Source:MGI Symbol;Acc:MGI:1919192]
56. Col5a2 ENSMUSG00000026042 5256 0.737 - 0.737 - - - - collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458]
57. Mical2 ENSMUSG00000038244 295 0.737 - - - - 0.737 - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
58. Hcn4 ENSMUSG00000032338 147 0.734 - - 0.734 - - - hyperpolarization-activated, cyclic nucleotide-gated K+ 4 [Source:MGI Symbol;Acc:MGI:1298209]
59. Upk3b ENSMUSG00000042985 2768 0.733 - - - - - 0.733 uroplakin 3B [Source:MGI Symbol;Acc:MGI:2140882]
60. Tacstd2 ENSMUSG00000051397 155 0.73 - - 0.730 - - - tumor-associated calcium signal transducer 2 [Source:MGI Symbol;Acc:MGI:1861606]
61. Dkk2 ENSMUSG00000028031 697 0.728 - - 0.728 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:MGI Symbol;Acc:MGI:1890663]
62. Tac2 ENSMUSG00000025400 746 0.727 - - 0.727 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
63. Pdgfra ENSMUSG00000029231 8057 0.727 0.727 - - - - - platelet derived growth factor receptor, alpha polypeptide [Source:MGI Symbol;Acc:MGI:97530]
64. Chtf18 ENSMUSG00000019214 275 0.726 - - 0.726 - - - CTF18, chromosome transmission fidelity factor 18 [Source:MGI Symbol;Acc:MGI:2384887]
65. Klf6 ENSMUSG00000000078 3184 0.722 - - 0.722 - - - Kruppel-like factor 6 [Source:MGI Symbol;Acc:MGI:1346318]
66. Camk2d ENSMUSG00000053819 1131 0.72 - - 0.720 - - - calcium/calmodulin-dependent protein kinase II, delta [Source:MGI Symbol;Acc:MGI:1341265]
67. Prdm6 ENSMUSG00000069378 328 0.718 - - 0.718 - - - PR domain containing 6 [Source:MGI Symbol;Acc:MGI:2684938]
68. Lect2 ENSMUSG00000021539 23 0.718 - - - - 0.718 - leukocyte cell-derived chemotaxin 2 [Source:MGI Symbol;Acc:MGI:1278342]
69. Gata6 ENSMUSG00000005836 5985 0.718 - - 0.718 - - - GATA binding protein 6 [Source:MGI Symbol;Acc:MGI:107516]
70. Pgm2 ENSMUSG00000025791, ENSMUSG00000116466 3193 0.717 - - 0.717 - - - phosphoglucomutase 2 [Source:MGI Symbol;Acc:MGI:97565]
71. Dpp4 ENSMUSG00000035000 65 0.714 - - - - 0.714 - dipeptidylpeptidase 4 [Source:MGI Symbol;Acc:MGI:94919]
72. Gpc3 ENSMUSG00000055653 26781 0.711 - - - 0.711 - - glypican 3 [Source:MGI Symbol;Acc:MGI:104903]
73. Serpina6 ENSMUSG00000060807 442 0.709 - - - - 0.709 - serine (or cysteine) peptidase inhibitor, clade A, member 6 [Source:MGI Symbol;Acc:MGI:88278]
74. Lrrc3b ENSMUSG00000045201 96 0.709 - - 0.709 - - - leucine rich repeat containing 3B [Source:MGI Symbol;Acc:MGI:2384996]
75. Casp6 ENSMUSG00000027997 6644 0.707 - - 0.707 - - - caspase 6 [Source:MGI Symbol;Acc:MGI:1312921]
76. AW551984 ENSMUSG00000038112 1111 0.707 - - 0.707 - - - expressed sequence AW551984 [Source:MGI Symbol;Acc:MGI:2143322]
77. Cpz ENSMUSG00000036596 337 0.706 - - 0.706 - - - carboxypeptidase Z [Source:MGI Symbol;Acc:MGI:88487]
78. Rps4y2 Rps4y2 1989 0.705 - - 0.705 - - -
79. Klf9 ENSMUSG00000033863 146 0.704 - - 0.704 - - - Kruppel-like factor 9 [Source:MGI Symbol;Acc:MGI:1333856]
80. Grin2c ENSMUSG00000020734 238 0.703 - - 0.703 - - - glutamate receptor, ionotropic, NMDA2C (epsilon 3) [Source:MGI Symbol;Acc:MGI:95822]
81. Flna ENSMUSG00000031328 19424 0.701 - - 0.701 - - - filamin, alpha [Source:MGI Symbol;Acc:MGI:95556]
82. Tgfbr3 ENSMUSG00000029287 1818 0.7 - 0.700 - - - - transforming growth factor, beta receptor III [Source:MGI Symbol;Acc:MGI:104637]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA