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Results for Col18a1

Gene Name Gene ID Reads Annotation
Col18a1 ENSMUSG00000001435 4894 collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]







Genes with expression patterns similar to Col18a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col18a1 ENSMUSG00000001435 4894 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]
2. C330027C09Rik 2892 1.718 0.893 0.825 - - - - RIKEN cDNA C330027C09 gene, transcript variant X2
3. Snapc2 ENSMUSG00000011837 1458 1.699 0.905 - - - 0.794 - small nuclear RNA activating complex, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1914861]
4. Ddx19a ENSMUSG00000015023 3351 1.685 0.983 - - - 0.702 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
5. Amfr ENSMUSG00000031751 3890 1.611 0.897 - - - 0.714 - autocrine motility factor receptor [Source:MGI Symbol;Acc:MGI:1345634]
6. Fmr1 ENSMUSG00000000838 3241 1.592 0.865 - - - - 0.727 fragile X mental retardation 1 [Source:MGI Symbol;Acc:MGI:95564]
7. Xpo6 ENSMUSG00000000131 3272 1.447 - 0.729 - - 0.718 - exportin 6 [Source:MGI Symbol;Acc:MGI:2429950]
8. 2410002F23Rik ENSMUSG00000045411 3068 0.973 0.973 - - - - - RIKEN cDNA 2410002F23 gene [Source:MGI Symbol;Acc:MGI:1914226]
9. Nudt4 ENSMUSG00000020029 8071 0.95 0.950 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:MGI Symbol;Acc:MGI:1918457]
10. Ptp4a2 ENSMUSG00000028788 15714 0.939 0.939 - - - - - protein tyrosine phosphatase 4a2 [Source:MGI Symbol;Acc:MGI:1277117]
11. Pdia6 ENSMUSG00000020571 27161 0.933 0.933 - - - - - protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
12. Acsl5 ENSMUSG00000024981 381 0.932 - - - - 0.932 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
13. Krt20 ENSMUSG00000035775 230 0.931 - - - - 0.931 - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
14. 4930480K23Rik ENSMUSG00000097284 105 0.93 - - - - 0.930 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
15. Zfp866 ENSMUSG00000043090 1114 0.929 - - - - 0.929 - zinc finger protein 866 [Source:MGI Symbol;Acc:MGI:3584369]
16. Hivep3 ENSMUSG00000028634 196 0.926 - - - - 0.926 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
17. Sec14l2 ENSMUSG00000003585 109 0.925 - - - - 0.925 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
18. Fkbp11 ENSMUSG00000003355 578 0.923 - - - - 0.923 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
19. Plxnc1 ENSMUSG00000074785 183 0.922 - - - - 0.922 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
20. Exo1 ENSMUSG00000039748 2677 0.922 0.922 - - - - - exonuclease 1 [Source:MGI Symbol;Acc:MGI:1349427]
21. Pacsin1 ENSMUSG00000040276 185 0.918 - - - - 0.918 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
22. Rhag ENSMUSG00000023926 119 0.917 - - - - 0.917 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
23. Kcnab2 ENSMUSG00000028931 291 0.917 - - - - 0.917 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
24. Ogt ENSMUSG00000034160 6437 0.916 0.916 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) [Source:MGI Symbol;Acc:MGI:1339639]
25. Wnk4 ENSMUSG00000035112 162 0.914 - - - - 0.914 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
26. Gm11989 ENSMUSG00000083553 73 0.914 - - - - 0.914 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
27. Jazf1 ENSMUSG00000063568 47 0.914 - - - - 0.914 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
28. Gzmc ENSMUSG00000079186 38 0.914 - - - - 0.914 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
29. Ampd3 ENSMUSG00000005686 113 0.914 - - - - 0.914 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
30. Pdcd4 ENSMUSG00000024975 1336 0.913 - - - - 0.913 - programmed cell death 4 [Source:MGI Symbol;Acc:MGI:107490]
31. H2-D1 ENSMUSG00000073411 344 0.913 - - - - 0.913 - histocompatibility 2, D region locus 1 [Source:MGI Symbol;Acc:MGI:95896]
32. Vmn1r132 ENSMUSG00000074322 39 0.913 - - - - 0.913 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
33. Tbc1d2 ENSMUSG00000039813 51 0.913 - - - - 0.913 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
34. Gm5644 ENSMUSG00000100104 76 0.913 - - - - 0.913 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
35. Ttc37 ENSMUSG00000033991 159 0.913 - - - - 0.913 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
36. Kctd10 ENSMUSG00000001098 136 0.912 - - - - 0.912 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
37. Cmpk2 ENSMUSG00000020638 304 0.912 - - - - 0.912 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:99830]
38. Ccdc126 ENSMUSG00000050786 121 0.912 - - - - 0.912 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
39. Snph ENSMUSG00000027457 95 0.911 - - - - 0.911 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
40. Pla2g3 ENSMUSG00000034579 79 0.911 - - - - 0.911 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
41. Tfpt ENSMUSG00000006335 157 0.911 - - - - 0.911 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
42. E030013I19Rik ENSMUSG00000086843 118 0.911 - - - - 0.911 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
43. Itih5 ENSMUSG00000025780 374 0.909 - - - - 0.909 - inter-alpha (globulin) inhibitor H5 [Source:MGI Symbol;Acc:MGI:1925751]
44. Cdk10 ENSMUSG00000033862 738 0.909 - - - - 0.909 - cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
45. Gm14813 ENSMUSG00000082549 69 0.909 - - - - 0.909 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
46. Pmel ENSMUSG00000025359 54 0.909 - - - - 0.909 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
47. Tmem189 ENSMUSG00000090213 1403 0.908 - - - - 0.908 - transmembrane protein 189 [Source:MGI Symbol;Acc:MGI:2142624]
48. Tmem25 ENSMUSG00000002032 100 0.907 - - - - 0.907 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
49. Fggy ENSMUSG00000028573 140 0.907 - - - - 0.907 - FGGY carbohydrate kinase domain containing [Source:MGI Symbol;Acc:MGI:1922828]
50. Ddx47 ENSMUSG00000030204 1576 0.907 - - - - 0.907 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
51. Gpc1 ENSMUSG00000034220 3271 0.907 0.907 - - - - - glypican 1 [Source:MGI Symbol;Acc:MGI:1194891]
52. Fbxo8 ENSMUSG00000038206 1079 0.907 - - - - 0.907 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
53. Flot2 ENSMUSG00000061981 864 0.907 - - - - 0.907 - flotillin 2 [Source:MGI Symbol;Acc:MGI:103309]
54. Cyr61 ENSMUSG00000028195 563 0.906 - - - - 0.906 - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
55. Nuak2 ENSMUSG00000009772 426 0.906 - - - - 0.906 - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
56. Zc3h6 ENSMUSG00000042851 135 0.905 - - - - 0.905 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
57. Gm9083 ENSMUSG00000083033 141 0.905 - - - - 0.905 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
58. Ophn1 ENSMUSG00000031214 1005 0.905 0.905 - - - - - oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
59. Vps37c ENSMUSG00000048832 399 0.905 0.905 - - - - - vacuolar protein sorting 37C [Source:MGI Symbol;Acc:MGI:2147661]
60. Thnsl1 ENSMUSG00000048550 750 0.904 0.904 - - - - - threonine synthase-like 1 (bacterial) [Source:MGI Symbol;Acc:MGI:2139347]
61. 4933436C20Rik 4933436C20Rik 653 0.904 0.904 - - - - -
62. Fga ENSMUSG00000028001 637 0.904 0.904 - - - - - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
63. Itgam ENSMUSG00000030786 399 0.904 0.904 - - - - - integrin alpha M [Source:MGI Symbol;Acc:MGI:96607]
64. Sap18 ENSMUSG00000021963 1402 0.904 0.904 - - - - - Sin3-associated polypeptide 18 [Source:MGI Symbol;Acc:MGI:1277978]
65. Gpatch11 ENSMUSG00000050668 796 0.904 0.904 - - - - - G patch domain containing 11 [Source:MGI Symbol;Acc:MGI:1858435]
66. Casp9 ENSMUSG00000028914 1554 0.904 0.904 - - - - - caspase 9 [Source:MGI Symbol;Acc:MGI:1277950]
67. Uba52 ENSMUSG00000090137 596 0.904 0.904 - - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887]
68. Ccdc115 ENSMUSG00000042111 1520 0.904 0.904 - - - - - coiled-coil domain containing 115 [Source:MGI Symbol;Acc:MGI:1916918]
69. Rpl18-ps1 ENSMUSG00000081382, ENSMUSG00000104421 832 0.903 0.903 - - - - - ribosomal protein L18, pseudogene 1 [Source:MGI Symbol;Acc:MGI:98018]
70. Cep89 ENSMUSG00000023072 738 0.903 0.903 - - - - - centrosomal protein 89 [Source:MGI Symbol;Acc:MGI:1919390]
71. Mtfr1 ENSMUSG00000027601 1822 0.903 0.903 - - - - - mitochondrial fission regulator 1 [Source:MGI Symbol;Acc:MGI:1914722]
72. Gm9843 ENSMUSG00000050299 3003 0.902 0.902 - - - - - predicted gene 9843 [Source:MGI Symbol;Acc:MGI:3708621]
73. Sema4b ENSMUSG00000030539 1344 0.902 0.902 - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B [Source:MGI Symbol;Acc:MGI:107559]
74. Gm23913 Gm23913 84 0.902 - - - - 0.902 -
75. Zfp516 ENSMUSG00000058881 4181 0.902 0.902 - - - - - zinc finger protein 516 [Source:MGI Symbol;Acc:MGI:2443957]
76. BC026585 1005 0.901 - - - - 0.901 - cDNA sequence BC026585, transcript variant X1
77. Mnt ENSMUSG00000000282 715 0.901 - - - - 0.901 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
78. Mrpl4 ENSMUSG00000003299 1998 0.901 0.901 - - - - - mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]
79. Srxn1 ENSMUSG00000032802 244 0.901 - - - - 0.901 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
80. 2410004N09Rik 2410004N09Rik 1843 0.9 0.900 - - - - -
81. Lpin1 ENSMUSG00000020593 407 0.899 - - - - 0.899 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
82. Mms22l ENSMUSG00000045751 2917 0.899 0.899 - - - - - MMS22-like, DNA repair protein [Source:MGI Symbol;Acc:MGI:2684980]
83. Dnajb11 ENSMUSG00000004460 1987 0.899 0.899 - - - - - DnaJ heat shock protein family (Hsp40) member B11 [Source:MGI Symbol;Acc:MGI:1915088]
84. Tmod3 ENSMUSG00000058587 3578 0.898 0.898 - - - - - tropomodulin 3 [Source:MGI Symbol;Acc:MGI:1355315]
85. Ldb3 ENSMUSG00000021798 170 0.898 - - - - 0.898 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
86. Rps2-ps13 ENSMUSG00000081684 3086 0.898 0.898 - - - - - ribosomal protein S2, pseudogene 13 [Source:MGI Symbol;Acc:MGI:3705640]
87. Carhsp1 ENSMUSG00000008393 4797 0.898 0.898 - - - - - calcium regulated heat stable protein 1 [Source:MGI Symbol;Acc:MGI:1196368]
88. E2f1 ENSMUSG00000027490 2357 0.897 0.897 - - - - - E2F transcription factor 1 [Source:MGI Symbol;Acc:MGI:101941]
89. Ap2a2 ENSMUSG00000002957 2973 0.897 0.897 - - - - - adaptor-related protein complex 2, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:101920]
90. Laptm4b ENSMUSG00000022257 3779 0.897 0.897 - - - - - lysosomal-associated protein transmembrane 4B [Source:MGI Symbol;Acc:MGI:1890494]
91. Crem ENSMUSG00000063889 328 0.897 - - - - 0.897 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
92. Ska1 ENSMUSG00000036223 2078 0.897 0.897 - - - - - spindle and kinetochore associated complex subunit 1 [Source:MGI Symbol;Acc:MGI:1913718]
93. Actr3 ENSMUSG00000026341 4146 0.897 0.897 - - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
94. Obsl1 ENSMUSG00000026211 3853 0.897 0.897 - - - - - obscurin-like 1 [Source:MGI Symbol;Acc:MGI:2138628]
95. Csnk1d ENSMUSG00000025162 9474 0.896 0.896 - - - - - casein kinase 1, delta [Source:MGI Symbol;Acc:MGI:1355272]
96. Zc2hc1a ENSMUSG00000043542 1781 0.896 0.896 - - - - - zinc finger, C2HC-type containing 1A [Source:MGI Symbol;Acc:MGI:1914556]
97. Ptpra ENSMUSG00000027303 1976 0.896 0.896 - - - - - protein tyrosine phosphatase, receptor type, A [Source:MGI Symbol;Acc:MGI:97808]
98. Med28 ENSMUSG00000015804 2949 0.896 - - - - 0.896 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
99. Ets2 ENSMUSG00000022895 1363 0.895 - - - - 0.895 - E26 avian leukemia oncogene 2, 3' domain [Source:MGI Symbol;Acc:MGI:95456]
100. Coro1a ENSMUSG00000030707 606 0.895 0.895 - - - - - coronin, actin binding protein 1A [Source:MGI Symbol;Acc:MGI:1345961]

There are 439 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA