Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col16a1

Gene Name Gene ID Reads Annotation
Col16a1 ENSMUSG00000040690 371 collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]







Genes with expression patterns similar to Col16a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col16a1 ENSMUSG00000040690 371 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]
2. Map3k6 ENSMUSG00000028862 50 1.513 0.806 - - - - 0.707 mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
3. Vgll1 ENSMUSG00000031131 10 0.879 0.879 - - - - - vestigial like family member 1 [Source:MGI Symbol;Acc:MGI:2655768]
4. Slc5a4b ENSMUSG00000020226 35 0.877 0.877 - - - - - solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
5. Dyrk1b ENSMUSG00000002409 201 0.866 0.866 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
6. E430024P14Rik ENSMUSG00000090069 38 0.858 0.858 - - - - - RIKEN cDNA E430024P14 gene [Source:MGI Symbol;Acc:MGI:2445079]
7. Gm13657 ENSMUSG00000086813 15 0.845 0.845 - - - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
8. Gm9967 ENSMUSG00000055323 7 0.845 0.845 - - - - - predicted gene 9967 [Source:MGI Symbol;Acc:MGI:3704300]
9. Gm6378 ENSMUSG00000062962 7 0.845 0.845 - - - - - predicted pseudogene 6378 [Source:MGI Symbol;Acc:MGI:3647253]
10. Gm11392 ENSMUSG00000097931 7 0.845 0.845 - - - - - predicted gene 11392 [Source:MGI Symbol;Acc:MGI:3649835]
11. Tmem215 ENSMUSG00000046593 29 0.843 0.843 - - - - - transmembrane protein 215 [Source:MGI Symbol;Acc:MGI:2444167]
12. Tlr1 ENSMUSG00000044827 9 0.843 0.843 - - - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
13. Chpf2 ENSMUSG00000038181 62 0.841 0.841 - - - - - chondroitin polymerizing factor 2 [Source:MGI Symbol;Acc:MGI:1917522]
14. Itga5 ENSMUSG00000000555 28 0.841 0.841 - - - - - integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]
15. Tmem170 ENSMUSG00000031953 67 0.84 0.840 - - - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
16. Hps6 ENSMUSG00000074811 74 0.84 0.840 - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
17. Gm14813 ENSMUSG00000082549 69 0.84 0.840 - - - - - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
18. Snora75 ENSMUSG00000064837 33 0.839 0.839 - - - - - small nucleolar RNA, H/ACA box 75 [Source:MGI Symbol;Acc:MGI:3819511]
19. Cpne4 ENSMUSG00000032564 37 0.835 0.835 - - - - - copine IV [Source:MGI Symbol;Acc:MGI:1921270]
20. 1110020A21Rik ENSMUSG00000097047 49 0.832 0.832 - - - - - RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
21. 1700019G17Rik 1700019G17Rik 54 0.829 0.829 - - - - -
22. Snx11 ENSMUSG00000020876 41 0.828 0.828 - - - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
23. Ap1s3 ENSMUSG00000054702 166 0.828 0.828 - - - - - adaptor-related protein complex AP-1, sigma 3 [Source:MGI Symbol;Acc:MGI:1891304]
24. Prdm10 ENSMUSG00000042496 118 0.827 0.827 - - - - - PR domain containing 10 [Source:MGI Symbol;Acc:MGI:2682952]
25. Vps11 ENSMUSG00000032127 317 0.826 0.826 - - - - - VPS11, CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1918982]
26. Hist1h2ai ENSMUSG00000071516 101 0.825 0.825 - - - - - histone cluster 1, H2ai [Source:MGI Symbol;Acc:MGI:2448457]
27. Ficd ENSMUSG00000053334 130 0.823 0.823 - - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
28. Gimap9 ENSMUSG00000051124 246 0.819 0.819 - - - - - GTPase, IMAP family member 9 [Source:MGI Symbol;Acc:MGI:3511744]
29. Col9a2 ENSMUSG00000028626 672 0.818 0.818 - - - - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
30. Mtcp1 ENSMUSG00000031200 338 0.811 - - - 0.811 - - mature T cell proliferation 1 [Source:MGI Symbol;Acc:MGI:102699]
31. Tmem69 ENSMUSG00000055900 851 0.811 0.811 - - - - - transmembrane protein 69 [Source:MGI Symbol;Acc:MGI:3045357]
32. Enpp1 ENSMUSG00000037370 109 0.807 0.807 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:97370]
33. Gm7452 ENSMUSG00000107310 296 0.805 0.805 - - - - - predicted pseudogene 7452 [Source:MGI Symbol;Acc:MGI:3645151]
34. Dusp14 ENSMUSG00000018648 212 0.805 0.805 - - - - - dual specificity phosphatase 14 [Source:MGI Symbol;Acc:MGI:1927168]
35. Helq ENSMUSG00000035266 104 0.804 0.804 - - - - - helicase, POLQ-like [Source:MGI Symbol;Acc:MGI:2176740]
36. Gm10226 ENSMUSG00000067929 43 0.804 0.804 - - - - - predicted gene 10226 [Source:MGI Symbol;Acc:MGI:3704470]
37. Slc17a5 ENSMUSG00000049624 246 0.803 0.803 - - - - - solute carrier family 17 (anion/sugar transporter), member 5 [Source:MGI Symbol;Acc:MGI:1924105]
38. Hebp2 ENSMUSG00000019853 538 0.802 0.802 - - - - - heme binding protein 2 [Source:MGI Symbol;Acc:MGI:1860084]
39. Gm24576 ENSMUSG00000093249 66 0.8 0.800 - - - - - predicted gene, 24576 [Source:MGI Symbol;Acc:MGI:5454353]
40. Arhgap25 ENSMUSG00000030047 123 0.8 - - 0.800 - - - Rho GTPase activating protein 25 [Source:MGI Symbol;Acc:MGI:2443687]
41. Gm10273 ENSMUSG00000069622 290 0.799 - - - 0.799 - - predicted pseudogene 10273 [Source:MGI Symbol;Acc:MGI:3704362]
42. Tax1bp3 ENSMUSG00000040158 23 0.799 0.799 - - - - - Tax1 (human T cell leukemia virus type I) binding protein 3 [Source:MGI Symbol;Acc:MGI:1923531]
43. Ankrd13d ENSMUSG00000005986 96 0.795 0.795 - - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
44. Bmp1 ENSMUSG00000022098 699 0.794 0.794 - - - - - bone morphogenetic protein 1 [Source:MGI Symbol;Acc:MGI:88176]
45. BC034090 ENSMUSG00000033722 148 0.794 0.794 - - - - - cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
46. Tmem91 ENSMUSG00000061702 36 0.794 - - - 0.794 - - transmembrane protein 91 [Source:MGI Symbol;Acc:MGI:2443589]
47. Map7 ENSMUSG00000019996 135 0.793 0.793 - - - - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
48. Asz1 ENSMUSG00000010796 17 0.793 0.793 - - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:MGI Symbol;Acc:MGI:1921318]
49. Acer3 ENSMUSG00000030760 598 0.792 0.792 - - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
50. Abcd1 ENSMUSG00000031378 696 0.79 - - - 0.790 - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
51. Aqp1 ENSMUSG00000004655 53 0.787 - - - 0.787 - - aquaporin 1 [Source:MGI Symbol;Acc:MGI:103201]
52. Lbp ENSMUSG00000016024 157 0.787 0.787 - - - - - lipopolysaccharide binding protein [Source:MGI Symbol;Acc:MGI:1098776]
53. Slc8a1 ENSMUSG00000054640 12 0.786 0.786 - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
54. B630019K06Rik ENSMUSG00000052364 523 0.785 0.785 - - - - - RIKEN cDNA B630019K06 gene [Source:MGI Symbol;Acc:MGI:2147918]
55. Zcchc12 ENSMUSG00000036699 253 0.783 0.783 - - - - - zinc finger, CCHC domain containing 12 [Source:MGI Symbol;Acc:MGI:1919943]
56. Mapk13 ENSMUSG00000004864 123 0.781 0.781 - - - - - mitogen-activated protein kinase 13 [Source:MGI Symbol;Acc:MGI:1346864]
57. Dact2 ENSMUSG00000048826 163 0.78 0.780 - - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
58. Vasn ENSMUSG00000039646 1210 0.779 - - - 0.779 - - vasorin [Source:MGI Symbol;Acc:MGI:2177651]
59. Rad52 ENSMUSG00000030166 681 0.778 - - - - - 0.778 RAD52 homolog, DNA repair protein [Source:MGI Symbol;Acc:MGI:101949]
60. Gabra1 ENSMUSG00000010803 177 0.778 0.778 - - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
61. Abcg4 ENSMUSG00000032131 186 0.778 - - - 0.778 - - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
62. Fam189a2 ENSMUSG00000071604 71 0.776 0.776 - - - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
63. Fam228a ENSMUSG00000079177 14 0.776 0.776 - - - - - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
64. Ephx1 ENSMUSG00000038776 79 0.772 0.772 - - - - - epoxide hydrolase 1, microsomal [Source:MGI Symbol;Acc:MGI:95405]
65. Gnal ENSMUSG00000024524 146 0.77 0.770 - - - - - guanine nucleotide binding protein, alpha stimulating, olfactory type [Source:MGI Symbol;Acc:MGI:95774]
66. Rem2 ENSMUSG00000022176 171 0.77 0.770 - - - - - rad and gem related GTP binding protein 2 [Source:MGI Symbol;Acc:MGI:2155260]
67. Vti1a ENSMUSG00000024983 189 0.77 0.770 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
68. Ppp1r3b ENSMUSG00000046794 68 0.77 - - - 0.770 - - protein phosphatase 1, regulatory subunit 3B [Source:MGI Symbol;Acc:MGI:2177268]
69. Klhl3 ENSMUSG00000014164 43 0.769 0.769 - - - - - kelch-like 3 [Source:MGI Symbol;Acc:MGI:2445185]
70. Crip1 ENSMUSG00000006360 447 0.768 - - - 0.768 - - cysteine-rich protein 1 (intestinal) [Source:MGI Symbol;Acc:MGI:88501]
71. Tmem63a ENSMUSG00000026519 90 0.768 0.768 - - - - - transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
72. Fgf18 ENSMUSG00000057967 46 0.765 0.765 - - - - - fibroblast growth factor 18 [Source:MGI Symbol;Acc:MGI:1277980]
73. Fv1 ENSMUSG00000070583 24 0.764 - - - 0.764 - - Friend virus susceptibility 1 [Source:MGI Symbol;Acc:MGI:95595]
74. Gm12909 ENSMUSG00000085404 14 0.764 - - - 0.764 - - predicted gene 12909 [Source:MGI Symbol;Acc:MGI:3651135]
75. Kcnk2 ENSMUSG00000037624 670 0.763 - - - 0.763 - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
76. Hyal3 ENSMUSG00000036091 127 0.762 0.762 - - - - - hyaluronoglucosaminidase 3 [Source:MGI Symbol;Acc:MGI:1330288]
77. Igsf6 ENSMUSG00000035004 28 0.762 - - - 0.762 - - immunoglobulin superfamily, member 6 [Source:MGI Symbol;Acc:MGI:1891393]
78. Emp2 ENSMUSG00000022505 118 0.762 - 0.762 - - - - epithelial membrane protein 2 [Source:MGI Symbol;Acc:MGI:1098726]
79. Gm13306 ENSMUSG00000073877 100 0.761 0.761 - - - - - predicted gene 13306 [Source:MGI Symbol;Acc:MGI:3713752]
80. 1700034H15Rik ENSMUSG00000055833, ENSMUSG00000111237 36 0.76 - - - 0.760 - - RIKEN cDNA 1700034H15 gene [Source:MGI Symbol;Acc:MGI:1921515]
81. Sec22c ENSMUSG00000061536 764 0.759 0.759 - - - - - SEC22 homolog C, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447871]
82. A730071L15Rik ENSMUSG00000096923 22 0.759 0.759 - - - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
83. Gm13477 ENSMUSG00000083849 19 0.759 - - - 0.759 - - predicted gene 13477 [Source:MGI Symbol;Acc:MGI:3652109]
84. Gm13212 ENSMUSG00000078502 151 0.757 - - - - - 0.757 predicted gene 13212 [Source:MGI Symbol;Acc:MGI:3651014]
85. Fgl1 ENSMUSG00000031594 32 0.757 - - - 0.757 - - fibrinogen-like protein 1 [Source:MGI Symbol;Acc:MGI:102795]
86. 4930581F22Rik ENSMUSG00000070315 248 0.757 0.757 - - - - - RIKEN cDNA 4930581F22 gene [Source:MGI Symbol;Acc:MGI:1926184]
87. Ust ENSMUSG00000047712 319 0.757 - - - 0.757 - - uronyl-2-sulfotransferase [Source:MGI Symbol;Acc:MGI:2442406]
88. Gm6222 ENSMUSG00000083019 145 0.756 0.756 - - - - - predicted pseudogene 6222 [Source:MGI Symbol;Acc:MGI:3648722]
89. Rora ENSMUSG00000032238 241 0.754 0.754 - - - - - RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]
90. Gm15396 ENSMUSG00000109491 112 0.754 - - - 0.754 - - predicted gene 15396 [Source:MGI Symbol;Acc:MGI:3705202]
91. Abcc3 ENSMUSG00000020865 75 0.753 - - - 0.753 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:MGI Symbol;Acc:MGI:1923658]
92. Pigv ENSMUSG00000043257 209 0.752 - - - 0.752 - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:MGI Symbol;Acc:MGI:2442480]
93. Tnfrsf10b ENSMUSG00000022074 398 0.752 0.752 - - - - - tumor necrosis factor receptor superfamily, member 10b [Source:MGI Symbol;Acc:MGI:1341090]
94. Gm10243 ENSMUSG00000095526 501 0.752 - - - 0.752 - - predicted gene 10243 [Source:MGI Symbol;Acc:MGI:3704266]
95. Gcom1 Gcom1 45 0.751 - - - 0.751 - -
96. Jdp2 ENSMUSG00000034271 175 0.75 0.750 - - - - - Jun dimerization protein 2 [Source:MGI Symbol;Acc:MGI:1932093]
97. Wnk4 ENSMUSG00000035112 162 0.749 - - - 0.749 - - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
98. Slc26a8 ENSMUSG00000036196 29 0.749 - - - 0.749 - - solute carrier family 26, member 8 [Source:MGI Symbol;Acc:MGI:2385046]
99. Maats1 ENSMUSG00000022805 60 0.748 0.748 - - - - - MYCBP-associated, testis expressed 1 [Source:MGI Symbol;Acc:MGI:2443598]
100. Tmem223 87 0.748 0.748 - - - - - transmembrane protein 223

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA