Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Col12a1

Gene Name Gene ID Reads Annotation
Col12a1 ENSMUSG00000032332 826 collagen, type XII, alpha 1 [Source:MGI Symbol;Acc:MGI:88448]







Genes with expression patterns similar to Col12a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col12a1 ENSMUSG00000032332 826 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type XII, alpha 1 [Source:MGI Symbol;Acc:MGI:88448]
2. 4933427J07Rik ENSMUSG00000087267 104 0.864 - - - 0.864 - - RIKEN cDNA 4933427J07 gene [Source:MGI Symbol;Acc:MGI:1918470]
3. Lgr6 ENSMUSG00000042793 34 0.861 - - - 0.861 - - leucine-rich repeat-containing G protein-coupled receptor 6 [Source:MGI Symbol;Acc:MGI:2441805]
4. Gpr161 ENSMUSG00000040836 49 0.857 - - - 0.857 - - G protein-coupled receptor 161 [Source:MGI Symbol;Acc:MGI:2685054]
5. Dbpht2 ENSMUSG00000029878 15 0.855 - - - 0.855 - - DNA binding protein with his-thr domain [Source:MGI Symbol;Acc:MGI:2679513]
6. Rnf183 ENSMUSG00000063851 14 0.855 - - - 0.855 - - ring finger protein 183 [Source:MGI Symbol;Acc:MGI:1923322]
7. Gm3712 ENSMUSG00000082371 14 0.855 - - - 0.855 - - predicted gene 3712 [Source:MGI Symbol;Acc:MGI:3781888]
8. Pramef17 ENSMUSG00000078509 32 0.855 - - - 0.855 - - PRAME family member 17 [Source:MGI Symbol;Acc:MGI:3650199]
9. Oraov1 ENSMUSG00000031072 415 0.852 - - - 0.852 - - oral cancer overexpressed 1 [Source:MGI Symbol;Acc:MGI:1919534]
10. Gm26603 ENSMUSG00000097857 20 0.851 - - - 0.851 - - predicted gene, 26603 [Source:MGI Symbol;Acc:MGI:5477097]
11. Cdk18 ENSMUSG00000026437 118 0.851 - - - 0.851 - - cyclin-dependent kinase 18 [Source:MGI Symbol;Acc:MGI:97518]
12. Letm2 ENSMUSG00000037363 105 0.85 - - - 0.850 - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:2444979]
13. A730045E13Rik ENSMUSG00000053979 16 0.849 - - - 0.849 - - RIKEN cDNA A730045E13 gene [Source:MGI Symbol;Acc:MGI:2685430]
14. Ano2 ENSMUSG00000038115 19 0.848 - - - 0.848 - - anoctamin 2 [Source:MGI Symbol;Acc:MGI:2387214]
15. Gm15952 ENSMUSG00000085655 100 0.847 - - - 0.847 - - predicted gene 15952 [Source:MGI Symbol;Acc:MGI:3802149]
16. Rmdn2 ENSMUSG00000036368 115 0.847 - - - 0.847 - - regulator of microtubule dynamics 2 [Source:MGI Symbol;Acc:MGI:2147043]
17. Star ENSMUSG00000031574 42 0.846 - - - 0.846 - - steroidogenic acute regulatory protein [Source:MGI Symbol;Acc:MGI:102760]
18. Bcmo1 Bcmo1 44 0.845 - - - 0.845 - -
19. Ccm2l ENSMUSG00000027474 175 0.843 - - - 0.843 - - cerebral cavernous malformation 2-like [Source:MGI Symbol;Acc:MGI:2385159]
20. Efcab12 ENSMUSG00000030321 63 0.84 - - - 0.840 - - EF-hand calcium binding domain 12 [Source:MGI Symbol;Acc:MGI:2681834]
21. Rab25 ENSMUSG00000008601 104 0.839 - - - 0.839 - - RAB25, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858203]
22. E130311K13Rik ENSMUSG00000048581 4352 0.838 - - - 0.838 - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
23. Trib3 ENSMUSG00000032715 37 0.837 - - - 0.837 - - tribbles pseudokinase 3 [Source:MGI Symbol;Acc:MGI:1345675]
24. Ppp1r13b ENSMUSG00000021285 299 0.837 - - - 0.837 - - protein phosphatase 1, regulatory subunit 13B [Source:MGI Symbol;Acc:MGI:1336199]
25. Hist1h2ab ENSMUSG00000061615 94 0.834 - - - 0.834 - - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
26. Alkbh6 ENSMUSG00000042831 746 0.834 - - - 0.834 - - alkB homolog 6 [Source:MGI Symbol;Acc:MGI:2142037]
27. Car5b ENSMUSG00000031373 107 0.833 - - - 0.833 - - carbonic anhydrase 5b, mitochondrial [Source:MGI Symbol;Acc:MGI:1926249]
28. Gm13771 ENSMUSG00000083832 132 0.83 - - - 0.830 - - predicted gene 13771 [Source:MGI Symbol;Acc:MGI:3650181]
29. Fam124b ENSMUSG00000043230 95 0.828 - - - 0.828 - - family with sequence similarity 124, member B [Source:MGI Symbol;Acc:MGI:3026880]
30. Rps13 ENSMUSG00000090862 73 0.827 - - - 0.827 - - ribosomal protein S13 [Source:MGI Symbol;Acc:MGI:1915302]
31. Gm15708 ENSMUSG00000086894 110 0.823 - - - 0.823 - - predicted gene 15708 [Source:MGI Symbol;Acc:MGI:3783149]
32. Chst11 ENSMUSG00000034612 241 0.82 - - - 0.820 - - carbohydrate sulfotransferase 11 [Source:MGI Symbol;Acc:MGI:1927166]
33. Znrd1as ENSMUSG00000036214 190 0.82 - - - 0.820 - - zinc ribbon domain containing 1, antisense [Source:MGI Symbol;Acc:MGI:1923666]
34. 4731419I09Rik ENSMUSG00000097004 89 0.819 - - - 0.819 - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
35. Synm ENSMUSG00000030554 90 0.816 - - - 0.816 - - synemin, intermediate filament protein [Source:MGI Symbol;Acc:MGI:2661187]
36. Oxsm ENSMUSG00000021786 115 0.816 - - - 0.816 - - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
37. Gm25663 ENSMUSG00000088323 172 0.815 - - - 0.815 - - predicted gene, 25663 [Source:MGI Symbol;Acc:MGI:5455440]
38. BC002163 ENSMUSG00000081824 561 0.815 - - - 0.815 - - cDNA sequence BC002163 [Source:MGI Symbol;Acc:MGI:3612445]
39. Veph1 ENSMUSG00000027831 101 0.807 - - - 0.807 - - ventricular zone expressed PH domain-containing 1 [Source:MGI Symbol;Acc:MGI:1920039]
40. Ptger4 ENSMUSG00000039942 133 0.805 - - - 0.805 - - prostaglandin E receptor 4 (subtype EP4) [Source:MGI Symbol;Acc:MGI:104311]
41. Gm9790 ENSMUSG00000044330 390 0.805 - - - 0.805 - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
42. Fbxo27 ENSMUSG00000037463 111 0.804 - - - 0.804 - - F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
43. Neil2 ENSMUSG00000035121 342 0.804 - - - 0.804 - - nei like 2 (E. coli) [Source:MGI Symbol;Acc:MGI:2686058]
44. Map7 ENSMUSG00000019996 135 0.804 - - - 0.804 - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
45. Rps18-ps3 ENSMUSG00000057657 245 0.804 - - - 0.804 - - ribosomal protein S18, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642474]
46. 1700066M21Rik ENSMUSG00000038323 217 0.803 - - - 0.803 - - RIKEN cDNA 1700066M21 gene [Source:MGI Symbol;Acc:MGI:1920717]
47. Gm13473 ENSMUSG00000083776 114 0.798 - - - 0.798 - - predicted gene 13473 [Source:MGI Symbol;Acc:MGI:3652338]
48. Tubd1 ENSMUSG00000020513 118 0.797 - - - 0.797 - - tubulin, delta 1 [Source:MGI Symbol;Acc:MGI:1891826]
49. Serpine2 ENSMUSG00000026249 1242 0.796 - - - 0.796 - - serine (or cysteine) peptidase inhibitor, clade E, member 2 [Source:MGI Symbol;Acc:MGI:101780]
50. 6430590A07Rik ENSMUSG00000097583, ENSMUSG00000116278 241 0.795 - - - 0.795 - - RIKEN cDNA 6430590A07 gene [Source:MGI Symbol;Acc:MGI:3648839]
51. Camk1d ENSMUSG00000039145 117 0.793 - - - 0.793 - - calcium/calmodulin-dependent protein kinase ID [Source:MGI Symbol;Acc:MGI:2442190]
52. Slc38a5 ENSMUSG00000031170 364 0.793 - - - 0.793 - - solute carrier family 38, member 5 [Source:MGI Symbol;Acc:MGI:2148066]
53. Mboat1 ENSMUSG00000038732 169 0.792 - - - 0.792 - - membrane bound O-acyltransferase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387184]
54. Gpr97 Gpr97 124 0.791 - - - 0.791 - -
55. Cntn1 ENSMUSG00000055022 89 0.791 - - - 0.791 - - contactin 1 [Source:MGI Symbol;Acc:MGI:105980]
56. Ostm1 ENSMUSG00000038280 208 0.79 - - - 0.790 - - osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
57. Kbtbd8 ENSMUSG00000030031 184 0.788 - - - 0.788 - - kelch repeat and BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:2661430]
58. Gimap4 ENSMUSG00000054435 237 0.788 0.788 - - - - - GTPase, IMAP family member 4 [Source:MGI Symbol;Acc:MGI:1349656]
59. Tmem101 ENSMUSG00000020921 556 0.787 - - - 0.787 - - transmembrane protein 101 [Source:MGI Symbol;Acc:MGI:1923797]
60. Ust ENSMUSG00000047712 319 0.783 0.783 - - - - - uronyl-2-sulfotransferase [Source:MGI Symbol;Acc:MGI:2442406]
61. Gm10086 ENSMUSG00000060730 2124 0.783 - - - 0.783 - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
62. Slc16a14 ENSMUSG00000026220 162 0.781 - - - 0.781 - - solute carrier family 16 (monocarboxylic acid transporters), member 14 [Source:MGI Symbol;Acc:MGI:1919031]
63. Rbm43 ENSMUSG00000036249 142 0.779 - - - 0.779 - - RNA binding motif protein 43 [Source:MGI Symbol;Acc:MGI:1918934]
64. Lins Lins 913 0.776 - - - 0.776 - -
65. Ranbp17 ENSMUSG00000040594 358 0.775 - - - 0.775 - - RAN binding protein 17 [Source:MGI Symbol;Acc:MGI:1929706]
66. Naga ENSMUSG00000022453 178 0.775 - - - 0.775 - - N-acetyl galactosaminidase, alpha [Source:MGI Symbol;Acc:MGI:1261422]
67. Psmc1 ENSMUSG00000021178 7395 0.773 - - - 0.773 - - protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054]
68. Gimap9 ENSMUSG00000051124 246 0.773 - - - 0.773 - - GTPase, IMAP family member 9 [Source:MGI Symbol;Acc:MGI:3511744]
69. Sgcd ENSMUSG00000020354 226 0.772 - - - 0.772 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:1346525]
70. 2900008C10Rik 2900008C10Rik 240 0.771 - - - 0.771 - -
71. Gm10093 ENSMUSG00000061062 597 0.77 - - - 0.770 - - predicted pseudogene 10093 [Source:MGI Symbol;Acc:MGI:3704479]
72. Saal1 ENSMUSG00000006763 2057 0.768 - - - 0.768 - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
73. Kntc1 ENSMUSG00000029414 1121 0.768 - - - 0.768 - - kinetochore associated 1 [Source:MGI Symbol;Acc:MGI:2673709]
74. Gm5665 Gm5665 82 0.767 - - - 0.767 - -
75. Amer2 ENSMUSG00000021986 556 0.766 - - - 0.766 - - APC membrane recruitment 2 [Source:MGI Symbol;Acc:MGI:1919375]
76. Ss18l1 ENSMUSG00000039086 356 0.765 - - - 0.765 - - SS18, nBAF chromatin remodeling complex subunit like 1 [Source:MGI Symbol;Acc:MGI:2444061]
77. Zfp748 ENSMUSG00000095432 393 0.764 - - - 0.764 - - zinc finger protein 748 [Source:MGI Symbol;Acc:MGI:1916455]
78. Smarcal1 ENSMUSG00000039354 331 0.762 - - - 0.762 - - SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:MGI Symbol;Acc:MGI:1859183]
79. Zfp280c ENSMUSG00000036916 742 0.761 - - - 0.761 - - zinc finger protein 280C [Source:MGI Symbol;Acc:MGI:2387585]
80. Slc16a12 ENSMUSG00000009378 53 0.76 - - - 0.760 - - solute carrier family 16 (monocarboxylic acid transporters), member 12 [Source:MGI Symbol;Acc:MGI:2147716]
81. Fancb ENSMUSG00000047757 576 0.759 - - - 0.759 - - Fanconi anemia, complementation group B [Source:MGI Symbol;Acc:MGI:2448558]
82. Hyal3 ENSMUSG00000036091 127 0.757 - - - 0.757 - - hyaluronoglucosaminidase 3 [Source:MGI Symbol;Acc:MGI:1330288]
83. 1500009L16Rik ENSMUSG00000087651 807 0.756 0.756 - - - - - RIKEN cDNA 1500009L16 gene [Source:MGI Symbol;Acc:MGI:1917034]
84. Apbb2 ENSMUSG00000029207 1589 0.755 0.755 - - - - - amyloid beta (A4) precursor protein-binding, family B, member 2 [Source:MGI Symbol;Acc:MGI:108405]
85. Polg2 ENSMUSG00000020718 273 0.754 - - - 0.754 - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
86. Sema4a ENSMUSG00000028064 151 0.753 - - - 0.753 - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]
87. Schip1 ENSMUSG00000027777 1140 0.753 0.753 - - - - - schwannomin interacting protein 1 [Source:MGI Symbol;Acc:MGI:1353557]
88. Ebag9 ENSMUSG00000022339 1050 0.752 0.752 - - - - - estrogen receptor-binding fragment-associated gene 9 [Source:MGI Symbol;Acc:MGI:1859920]
89. Wdr20a Wdr20a 274 0.751 - - - 0.751 - -
90. Usp2 ENSMUSG00000032010 525 0.751 - - - 0.751 - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
91. Akip1 ENSMUSG00000031023 431 0.751 - - - 0.751 - - A kinase (PRKA) interacting protein 1 [Source:MGI Symbol;Acc:MGI:3041226]
92. Sike1 ENSMUSG00000027854 1179 0.75 - - - 0.750 - - suppressor of IKBKE 1 [Source:MGI Symbol;Acc:MGI:1913891]
93. Abtb2 ENSMUSG00000032724 647 0.75 - - - 0.750 - - ankyrin repeat and BTB (POZ) domain containing 2 [Source:MGI Symbol;Acc:MGI:2139365]
94. Zfp53 ENSMUSG00000057409 96 0.75 - - - 0.750 - - zinc finger protein 53 [Source:MGI Symbol;Acc:MGI:99200]
95. Mdc1 ENSMUSG00000061607 1966 0.748 - - - 0.748 - - mediator of DNA damage checkpoint 1 [Source:MGI Symbol;Acc:MGI:3525201]
96. Gm5940 ENSMUSG00000081205 500 0.745 0.745 - - - - - predicted gene 5940 [Source:MGI Symbol;Acc:MGI:3648847]
97. Tmem59l ENSMUSG00000035964 220 0.744 - - - 0.744 - - transmembrane protein 59-like [Source:MGI Symbol;Acc:MGI:1915187]
98. Zfand2a ENSMUSG00000053581 353 0.743 - - - 0.743 - - zinc finger, AN1-type domain 2A [Source:MGI Symbol;Acc:MGI:2140729]
99. Tmem259 ENSMUSG00000013858 819 0.743 - - - 0.743 - - transmembrane protein 259 [Source:MGI Symbol;Acc:MGI:2177957]
100. Susd2 ENSMUSG00000006342 205 0.742 - - - 0.742 - - sushi domain containing 2 [Source:MGI Symbol;Acc:MGI:1918983]

There are 56 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA