Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Clrn1

Gene Name Gene ID Reads Annotation
Clrn1 ENSMUSG00000043850 2 clarin 1 [Source:MGI Symbol;Acc:MGI:2388124]







Genes with expression patterns similar to Clrn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Clrn1 ENSMUSG00000043850 2 3 - - 1.000 1.000 1.000 - clarin 1 [Source:MGI Symbol;Acc:MGI:2388124]
2. Gm5939 ENSMUSG00000083258 7 1.768 - - 0.768 1.000 - - predicted pseudogene 5939 [Source:MGI Symbol;Acc:MGI:3648845]
3. Gm5806 Gm5806 1 1 - - - - 1.000 -
4. 1810013D15Rik ENSMUSG00000028177 15 1 - - - - 1.000 - RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]
5. Fut1 ENSMUSG00000008461 1 1 - - - - 1.000 - fucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:109375]
6. Gm13901 ENSMUSG00000085530 1 1 - - - - 1.000 - predicted gene 13901 [Source:MGI Symbol;Acc:MGI:3826588]
7. Cacna1i ENSMUSG00000022416 8 1 - - - 1.000 - - calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]
8. Tlr8 ENSMUSG00000040522 1 1 - - - 1.000 - - toll-like receptor 8 [Source:MGI Symbol;Acc:MGI:2176887]
9. Pdzd3 ENSMUSG00000032105 1 1 - - - 1.000 - - PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:2429554]
10. Slc17a4 ENSMUSG00000021336 10 1 - - - 1.000 - - solute carrier family 17 (sodium phosphate), member 4 [Source:MGI Symbol;Acc:MGI:2442850]
11. 4732414G09Rik ENSMUSG00000086943 8 1 - - - 1.000 - - RIKEN cDNA 4732414G09 gene [Source:MGI Symbol;Acc:MGI:3045381]
12. Tmem181b-ps ENSMUSG00000096780 8 1 - - - 1.000 - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
13. Vax2os ENSMUSG00000085794 1 1 - - - - 1.000 - ventral anterior homeobox 2, opposite strand [Source:MGI Symbol;Acc:MGI:3583301]
14. Vmn1r-ps144 ENSMUSG00000067949 1 1 - - - 1.000 - - vomeronasal 1 receptor, pseudogene 144 [Source:MGI Symbol;Acc:MGI:3649147]
15. Ptchd3 ENSMUSG00000039198 6 1 - - - - 1.000 - patched domain containing 3 [Source:MGI Symbol;Acc:MGI:1921925]
16. Chrnb3 ENSMUSG00000031492 2 1 - - - - 1.000 - cholinergic receptor, nicotinic, beta polypeptide 3 [Source:MGI Symbol;Acc:MGI:106212]
17. Cdx4 ENSMUSG00000031326 2 1 - - - 1.000 - - caudal type homeobox 4 [Source:MGI Symbol;Acc:MGI:88362]
18. Clec4e ENSMUSG00000030142 3 1 - - - 1.000 - - C-type lectin domain family 4, member e [Source:MGI Symbol;Acc:MGI:1861232]
19. Gm12816 ENSMUSG00000083011 3 1 - - - 1.000 - - predicted gene 12816 [Source:MGI Symbol;Acc:MGI:3649628]
20. BC051070 BC051070 6 1 - - - 1.000 - -
21. Gm14465 ENSMUSG00000083691 1 1 - - - 1.000 - - predicted gene 14465 [Source:MGI Symbol;Acc:MGI:3651393]
22. Morn3 ENSMUSG00000029477 2 1 - - - - 1.000 - MORN repeat containing 3 [Source:MGI Symbol;Acc:MGI:1922140]
23. Clec5a ENSMUSG00000029915 6 1 - - - 1.000 - - C-type lectin domain family 5, member a [Source:MGI Symbol;Acc:MGI:1345151]
24. Tpbpb ENSMUSG00000062705 1 1 - - - 1.000 - - trophoblast specific protein beta [Source:MGI Symbol;Acc:MGI:2151721]
25. Gm11714 ENSMUSG00000087113 3 1 - - - - 1.000 - predicted gene 11714 [Source:MGI Symbol;Acc:MGI:3649214]
26. Gm11281 ENSMUSG00000078917 11 1 - - - - 1.000 - predicted gene 11281 [Source:MGI Symbol;Acc:MGI:3651906]
27. 1700003M07Rik ENSMUSG00000085389 6 1 - - - - 1.000 - RIKEN cDNA 1700003M07 gene [Source:MGI Symbol;Acc:MGI:1919475]
28. Gm5766 ENSMUSG00000089645 11 1 - - - 1.000 - - predicted gene 5766 [Source:MGI Symbol;Acc:MGI:3643508]
29. Gm15400 ENSMUSG00000080842 2 1 - - - - 1.000 - predicted gene 15400 [Source:MGI Symbol;Acc:MGI:3705651]
30. Spatc1l ENSMUSG00000009115 3 1 - - - - 1.000 - spermatogenesis and centriole associated 1 like [Source:MGI Symbol;Acc:MGI:1923823]
31. A530083I20Rik ENSMUSG00000097322 5 1 - - - - 1.000 - RIKEN cDNA A530083I20 gene [Source:MGI Symbol;Acc:MGI:3040711]
32. Ifi203 ENSMUSG00000039997 17 1 - - - 1.000 - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
33. 1700001G01Rik ENSMUSG00000087170 3 1 - - - 1.000 - - RIKEN cDNA 1700001G01 gene [Source:MGI Symbol;Acc:MGI:1922683]
34. Gm14840 ENSMUSG00000083414 6 1 - - - - 1.000 - predicted gene 14840 [Source:MGI Symbol;Acc:MGI:3801922]
35. Snhg3 ENSMUSG00000085241 17 1 - - - 1.000 - - small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]
36. Gm5809 ENSMUSG00000043870 1 1 - - - - 1.000 - predicted pseudogene 5809 [Source:MGI Symbol;Acc:MGI:3647324]
37. Meiob ENSMUSG00000024155 2 1 - - - - 1.000 - meiosis specific with OB domains [Source:MGI Symbol;Acc:MGI:1922428]
38. Gm12412 ENSMUSG00000083685 7 1 - - - - 1.000 - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
39. Gm15971 ENSMUSG00000081692 1 1 - - - 1.000 - - predicted gene 15971 [Source:MGI Symbol;Acc:MGI:3802013]
40. Gm16270 ENSMUSG00000089775 1 1 - - - - 1.000 - predicted gene 16270 [Source:MGI Symbol;Acc:MGI:3841260]
41. Gm22105 ENSMUSG00000080384 5 1 - - - 1.000 - - predicted gene, 22105 [Source:MGI Symbol;Acc:MGI:5451882]
42. Gm15070 Gm15070 1 1 - - - 1.000 - -
43. Gm15625 ENSMUSG00000082744 1 1 - - - 1.000 - - predicted gene 15625 [Source:MGI Symbol;Acc:MGI:3783069]
44. 5033403F01Rik ENSMUSG00000096932 4 1 - - - - 1.000 - RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
45. Gm12279 ENSMUSG00000087120 4 1 - - - 1.000 - - predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]
46. Gm27028 ENSMUSG00000097970 2 1 - - - - 1.000 - predicted gene, 27028 [Source:MGI Symbol;Acc:MGI:5504143]
47. Gm13135 ENSMUSG00000082925 3 1 - - - - 1.000 - predicted gene 13135 [Source:MGI Symbol;Acc:MGI:3650404]
48. Gm16340 Gm16340 3 1 - - - 1.000 - -
49. Gm26671 ENSMUSG00000097339 2 1 - - - 1.000 - - predicted gene, 26671 [Source:MGI Symbol;Acc:MGI:5477165]
50. Ntn5 ENSMUSG00000070564 22 1 - - - 1.000 - - netrin 5 [Source:MGI Symbol;Acc:MGI:2685330]
51. Gm14690 Gm14690 2 1 - - - 1.000 - -
52. H2-DMb1 ENSMUSG00000079547 2 1 - - - 1.000 - - histocompatibility 2, class II, locus Mb1 [Source:MGI Symbol;Acc:MGI:95922]
53. Usp53 ENSMUSG00000039701 23 1 - - - - 1.000 - ubiquitin specific peptidase 53 [Source:MGI Symbol;Acc:MGI:2139607]
54. Mir3098 ENSMUSG00000093157 3 1 - - - 1.000 - - microRNA 3098 [Source:MGI Symbol;Acc:MGI:4834313]
55. Acsm2 ENSMUSG00000030945 31 1 - - - 1.000 - - acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
56. Chdh ENSMUSG00000015970 1 1 - - - - 1.000 - choline dehydrogenase [Source:MGI Symbol;Acc:MGI:1860776]
57. Cd48 ENSMUSG00000015355 1 1 - - - - 1.000 - CD48 antigen [Source:MGI Symbol;Acc:MGI:88339]
58. Ticam2 ENSMUSG00000056130 8 1 - - - - 1.000 - toll-like receptor adaptor molecule 2 [Source:MGI Symbol;Acc:MGI:3040056]
59. Glyat ENSMUSG00000063683 4 1 - - - 1.000 - - glycine-N-acyltransferase [Source:MGI Symbol;Acc:MGI:2147502]
60. 2410080I02Rik ENSMUSG00000044387 3 1 - - - - 1.000 - RIKEN cDNA 2410080I02 gene [Source:MGI Symbol;Acc:MGI:1915498]
61. Gm12703 ENSMUSG00000052767 2 1 - - - 1.000 - - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
62. Gm694 1 1 - - - - 1.000 - predicted gene 694
63. Gm16049 Gm16049 3 1 - - - 1.000 - -
64. Gm22661 ENSMUSG00000077380 11 1 - - - 1.000 - - predicted gene, 22661 [Source:MGI Symbol;Acc:MGI:5452438]
65. Cebpe ENSMUSG00000052435 1 1 - - - - 1.000 - CCAAT/enhancer binding protein (C/EBP), epsilon [Source:MGI Symbol;Acc:MGI:103572]
66. Ptger1 ENSMUSG00000019464 5 1 - - - 1.000 - - prostaglandin E receptor 1 (subtype EP1) [Source:MGI Symbol;Acc:MGI:97793]
67. 9530056K15Rik ENSMUSG00000045345 9 1 - - - - 1.000 - RIKEN cDNA 9530056K15 gene [Source:MGI Symbol;Acc:MGI:2444456]
68. Mical1 ENSMUSG00000019823 14 1 - - - 1.000 - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
69. Gm20422 ENSMUSG00000092544 1 1 - - - - 1.000 - predicted gene 20422 [Source:MGI Symbol;Acc:MGI:5141887]
70. Gm12022 ENSMUSG00000085675 13 1 - - - 1.000 - - predicted gene 12022 [Source:MGI Symbol;Acc:MGI:3650976]
71. Nrg2 ENSMUSG00000060275 16 1 - - - 1.000 - - neuregulin 2 [Source:MGI Symbol;Acc:MGI:1098246]
72. 1700061H18Rik ENSMUSG00000084948 1 1 - - - - 1.000 - RIKEN cDNA 1700061H18 gene [Source:MGI Symbol;Acc:MGI:1920711]
73. Gm2449 ENSMUSG00000097223 1 1 - - - - 1.000 - predicted gene 2449 [Source:MGI Symbol;Acc:MGI:3780616]
74. Ankar ENSMUSG00000039342 2 1 - - - - 1.000 - ankyrin and armadillo repeat containing [Source:MGI Symbol;Acc:MGI:2442559]
75. Adprhl1 ENSMUSG00000031448 1 1 - - - - 1.000 - ADP-ribosylhydrolase like 1 [Source:MGI Symbol;Acc:MGI:2442168]
76. Gm13550 ENSMUSG00000084250 5 1 - - - 1.000 - - predicted gene 13550 [Source:MGI Symbol;Acc:MGI:3651031]
77. Rhoh ENSMUSG00000029204 19 0.958 - - - 0.958 - - ras homolog family member H [Source:MGI Symbol;Acc:MGI:1921984]
78. Nat1 ENSMUSG00000025588 11 0.931 - - - 0.931 - - N-acetyl transferase 1 [Source:MGI Symbol;Acc:MGI:97279]
79. Ccdc144b ENSMUSG00000047696 7 0.921 - - 0.921 - - - coiled-coil domain containing 144B [Source:MGI Symbol;Acc:MGI:2681852]
80. Gm5446 ENSMUSG00000050243 19 0.919 - - - 0.919 - - predicted gene 5446 [Source:MGI Symbol;Acc:MGI:3644854]
81. Gpr114 Gpr114 5 0.895 - - - 0.895 - -
82. Gm11263 ENSMUSG00000083496 21 0.893 - - - 0.893 - - predicted gene 11263 [Source:MGI Symbol;Acc:MGI:3651899]
83. Ptgir ENSMUSG00000043017 22 0.892 - - 0.892 - - - prostaglandin I receptor (IP) [Source:MGI Symbol;Acc:MGI:99535]
84. Cys1 ENSMUSG00000062563 20 0.884 - - 0.884 - - - cystin 1 [Source:MGI Symbol;Acc:MGI:2177632]
85. Cntn5 ENSMUSG00000039488 15 0.854 - - - 0.854 - - contactin 5 [Source:MGI Symbol;Acc:MGI:3042287]
86. Psmb8 ENSMUSG00000024338 16 0.853 - - - - 0.853 - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) [Source:MGI Symbol;Acc:MGI:1346527]
87. Aldh1a1 ENSMUSG00000053279 80 0.85 - - - 0.850 - - aldehyde dehydrogenase family 1, subfamily A1 [Source:MGI Symbol;Acc:MGI:1353450]
88. 2610204G07Rik ENSMUSG00000084860 5 0.849 - - 0.849 - - - RIKEN cDNA 2610204G07 gene [Source:MGI Symbol;Acc:MGI:1919718]
89. Catsperd ENSMUSG00000040828 9 0.844 - - - 0.844 - - cation channel sperm associated auxiliary subunit delta [Source:MGI Symbol;Acc:MGI:2147030]
90. Gm22228 ENSMUSG00000087989 3 0.84 - - - 0.840 - - predicted gene, 22228 [Source:MGI Symbol;Acc:MGI:5452005]
91. Upb1 ENSMUSG00000033427 20 0.838 - - - 0.838 - - ureidopropionase, beta [Source:MGI Symbol;Acc:MGI:2143535]
92. Gm15716 ENSMUSG00000089995 2 0.834 - - 0.834 - - - predicted gene 15716 [Source:MGI Symbol;Acc:MGI:3783158]
93. Lpin3 ENSMUSG00000027412 6 0.83 - - - - 0.830 - lipin 3 [Source:MGI Symbol;Acc:MGI:1891342]
94. Cyp11a1 ENSMUSG00000032323 9 0.827 - - - 0.827 - - cytochrome P450, family 11, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88582]
95. Crygc ENSMUSG00000025952 13 0.827 - - - 0.827 - - crystallin, gamma C [Source:MGI Symbol;Acc:MGI:88523]
96. Tlr7 ENSMUSG00000044583 11 0.825 - - - - 0.825 - toll-like receptor 7 [Source:MGI Symbol;Acc:MGI:2176882]
97. Tph1 ENSMUSG00000040046 14 0.812 - - 0.812 - - - tryptophan hydroxylase 1 [Source:MGI Symbol;Acc:MGI:98796]
98. Pramel7 ENSMUSG00000025839 20 0.805 - - - 0.805 - - preferentially expressed antigen in melanoma like 7 [Source:MGI Symbol;Acc:MGI:2156391]
99. Gm26756 ENSMUSG00000097840 5 0.804 - - - - 0.804 - predicted gene, 26756 [Source:MGI Symbol;Acc:MGI:5477250]
100. Sspo ENSMUSG00000029797 15 0.804 - - - - 0.804 - SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]

There are 76 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA