Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cln3

Gene Name Gene ID Reads Annotation
Cln3 ENSMUSG00000030720 1100 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]







Genes with expression patterns similar to Cln3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cln3 ENSMUSG00000030720 1100 6 1.000 1.000 1.000 1.000 1.000 1.000 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]
2. Brd1 ENSMUSG00000022387 1565 1.746 0.976 - - - 0.770 - bromodomain containing 1 [Source:MGI Symbol;Acc:MGI:1924161]
3. 0610005C13Rik ENSMUSG00000109644 478 0.998 0.998 - - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
4. Dlg4 ENSMUSG00000020886 393 0.998 0.998 - - - - - discs large MAGUK scaffold protein 4 [Source:MGI Symbol;Acc:MGI:1277959]
5. Rcl1 ENSMUSG00000024785 1676 0.998 0.998 - - - - - RNA terminal phosphate cyclase-like 1 [Source:MGI Symbol;Acc:MGI:1913275]
6. Abcd1 ENSMUSG00000031378 696 0.997 0.997 - - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
7. Dyrk3 ENSMUSG00000016526 576 0.997 0.997 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 [Source:MGI Symbol;Acc:MGI:1330300]
8. Ttpal ENSMUSG00000017679 922 0.997 0.997 - - - - - tocopherol (alpha) transfer protein-like [Source:MGI Symbol;Acc:MGI:1923330]
9. Snx10 ENSMUSG00000038301 2115 0.997 0.997 - - - - - sorting nexin 10 [Source:MGI Symbol;Acc:MGI:1919232]
10. Samsn1 ENSMUSG00000022876 406 0.997 0.997 - - - - - SAM domain, SH3 domain and nuclear localization signals, 1 [Source:MGI Symbol;Acc:MGI:1914992]
11. Rmrp ENSMUSG00000088088 349 0.997 0.997 - - - - - RNA component of mitochondrial RNAase P [Source:MGI Symbol;Acc:MGI:97937]
12. Bai3 Bai3 552 0.997 0.997 - - - - -
13. Zfp367 ENSMUSG00000044934 1130 0.997 0.997 - - - - - zinc finger protein 367 [Source:MGI Symbol;Acc:MGI:2442266]
14. Zfp850 ENSMUSG00000096916 401 0.997 0.997 - - - - - zinc finger protein 850 [Source:MGI Symbol;Acc:MGI:3036281]
15. Syt13 ENSMUSG00000027220 679 0.997 0.997 - - - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
16. Chmp6 ENSMUSG00000025371 1369 0.996 0.996 - - - - - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
17. Zfp287 ENSMUSG00000005267 876 0.996 0.996 - - - - - zinc finger protein 287 [Source:MGI Symbol;Acc:MGI:2176561]
18. Rps6ka1 ENSMUSG00000003644 1196 0.996 0.996 - - - - - ribosomal protein S6 kinase polypeptide 1 [Source:MGI Symbol;Acc:MGI:104558]
19. Fam175a 970 0.996 0.996 - - - - - family with sequence similarity 175, member A, transcript variant X2
20. Pfkl ENSMUSG00000020277 2200 0.996 0.996 - - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
21. Fam192a ENSMUSG00000031774 2091 0.996 0.996 - - - - - family with sequence similarity 192, member A [Source:MGI Symbol;Acc:MGI:1919637]
22. Nnt ENSMUSG00000025453, ENSMUSG00000116207 2284 0.996 0.996 - - - - - nicotinamide nucleotide transhydrogenase [Source:MGI Symbol;Acc:MGI:109279]
23. Tnrc18 ENSMUSG00000039477 1051 0.996 0.996 - - - - - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
24. Samd4 ENSMUSG00000021838 1321 0.996 0.996 - - - - - sterile alpha motif domain containing 4 [Source:MGI Symbol;Acc:MGI:1921730]
25. Wdr60 ENSMUSG00000042050 672 0.996 0.996 - - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
26. Neurog2 ENSMUSG00000027967 670 0.996 0.996 - - - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
27. Wnt5a ENSMUSG00000021994 2387 0.995 0.995 - - - - - wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
28. Gm3244 1303 0.995 0.995 - - - - - predicted pseudogene 3244
29. 2610008E11Rik ENSMUSG00000060301 1912 0.995 0.995 - - - - - RIKEN cDNA 2610008E11 gene [Source:MGI Symbol;Acc:MGI:1919378]
30. Plec ENSMUSG00000022565 2555 0.995 0.995 - - - - - plectin [Source:MGI Symbol;Acc:MGI:1277961]
31. Dtwd2 ENSMUSG00000024505 830 0.995 0.995 - - - - - DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
32. Abhd17c ENSMUSG00000038459 2034 0.995 0.995 - - - - - abhydrolase domain containing 17C [Source:MGI Symbol;Acc:MGI:1917428]
33. Cnnm3 ENSMUSG00000001138 1820 0.995 0.995 - - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
34. Opa1 ENSMUSG00000038084 1963 0.995 0.995 - - - - - OPA1, mitochondrial dynamin like GTPase [Source:MGI Symbol;Acc:MGI:1921393]
35. Vps36 ENSMUSG00000031479 2501 0.995 0.995 - - - - - vacuolar protein sorting 36 [Source:MGI Symbol;Acc:MGI:1917410]
36. Mrps25 ENSMUSG00000014551 1972 0.995 0.995 - - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
37. Mrpl9 ENSMUSG00000028140 1835 0.995 0.995 - - - - - mitochondrial ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:2137211]
38. Tpd52 ENSMUSG00000027506 1885 0.995 0.995 - - - - - tumor protein D52 [Source:MGI Symbol;Acc:MGI:107749]
39. Acad9 ENSMUSG00000027710 2657 0.994 0.994 - - - - - acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
40. Mfap3 ENSMUSG00000020522 5793 0.993 0.993 - - - - - microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
41. Pmepa1 ENSMUSG00000038400 1294 0.993 0.993 - - - - - prostate transmembrane protein, androgen induced 1 [Source:MGI Symbol;Acc:MGI:1929600]
42. Sgol2 Sgol2 2618 0.993 0.993 - - - - -
43. Med1 ENSMUSG00000018160 2865 0.992 0.992 - - - - - mediator complex subunit 1 [Source:MGI Symbol;Acc:MGI:1100846]
44. Rgs12 ENSMUSG00000029101 3712 0.992 0.992 - - - - - regulator of G-protein signaling 12 [Source:MGI Symbol;Acc:MGI:1918979]
45. Tbc1d16 ENSMUSG00000039976 4754 0.992 0.992 - - - - - TBC1 domain family, member 16 [Source:MGI Symbol;Acc:MGI:2652878]
46. Arhgef2 ENSMUSG00000028059 3179 0.991 0.991 - - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
47. Gm15662 Gm15662 1356 0.991 0.991 - - - - -
48. Irak1 ENSMUSG00000031392 3219 0.991 0.991 - - - - - interleukin-1 receptor-associated kinase 1 [Source:MGI Symbol;Acc:MGI:107420]
49. Fez1 ENSMUSG00000032118 2537 0.991 0.991 - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
50. Rassf4 ENSMUSG00000042129 1399 0.991 0.991 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
51. Ccdc34 ENSMUSG00000027160 5334 0.991 0.991 - - - - - coiled-coil domain containing 34 [Source:MGI Symbol;Acc:MGI:1915451]
52. Taf15 ENSMUSG00000020680 2417 0.991 0.991 - - - - - TATA-box binding protein associated factor 15 [Source:MGI Symbol;Acc:MGI:1917689]
53. Dctn1 ENSMUSG00000031865 11800 0.99 0.990 - - - - - dynactin 1 [Source:MGI Symbol;Acc:MGI:107745]
54. Egln2 ENSMUSG00000058709 2852 0.99 0.990 - - - - - egl-9 family hypoxia-inducible factor 2 [Source:MGI Symbol;Acc:MGI:1932287]
55. Bcl2l12 ENSMUSG00000003190 2295 0.989 0.989 - - - - - BCL2-like 12 (proline rich) [Source:MGI Symbol;Acc:MGI:1922986]
56. Sdr39u1 ENSMUSG00000022223 4051 0.989 0.989 - - - - - short chain dehydrogenase/reductase family 39U, member 1 [Source:MGI Symbol;Acc:MGI:1916876]
57. Trim8 ENSMUSG00000025034 1494 0.989 0.989 - - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
58. Chmp5 ENSMUSG00000028419 5927 0.988 0.988 - - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
59. Lsm4 ENSMUSG00000031848, ENSMUSG00000110900 4991 0.988 0.988 - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1354692]
60. Psmd13 ENSMUSG00000025487 5365 0.988 0.988 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:MGI Symbol;Acc:MGI:1345192]
61. Isca2 ENSMUSG00000021241 4922 0.987 0.987 - - - - - iron-sulfur cluster assembly 2 [Source:MGI Symbol;Acc:MGI:1921566]
62. Luzp1 ENSMUSG00000001089 2070 0.987 0.987 - - - - - leucine zipper protein 1 [Source:MGI Symbol;Acc:MGI:107629]
63. Sik2 ENSMUSG00000037112 1369 0.987 0.987 - - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
64. Sh3bgrl ENSMUSG00000031246 3900 0.986 0.986 - - - - - SH3-binding domain glutamic acid-rich protein like [Source:MGI Symbol;Acc:MGI:1930849]
65. Ppp1r9b ENSMUSG00000038976 4099 0.986 0.986 - - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
66. Rab11a ENSMUSG00000004771 5656 0.986 0.986 - - - - - RAB11A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858202]
67. Arl1 ENSMUSG00000060904 5503 0.986 0.986 - - - - - ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
68. Slc2a3 ENSMUSG00000003153 5785 0.985 0.985 - - - - - solute carrier family 2 (facilitated glucose transporter), member 3 [Source:MGI Symbol;Acc:MGI:95757]
69. Plekha1 ENSMUSG00000040268 3807 0.984 0.984 - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:MGI Symbol;Acc:MGI:2442213]
70. Arl2 ENSMUSG00000024944 4376 0.983 0.983 - - - - - ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
71. Psmd3 ENSMUSG00000017221 4266 0.983 0.983 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 [Source:MGI Symbol;Acc:MGI:98858]
72. Serinc1 ENSMUSG00000019877 7383 0.982 0.982 - - - - - serine incorporator 1 [Source:MGI Symbol;Acc:MGI:1926228]
73. Snrpa1 ENSMUSG00000030512 3270 0.982 0.982 - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:MGI Symbol;Acc:MGI:1916231]
74. Lamp2 ENSMUSG00000016534 3440 0.981 0.981 - - - - - lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
75. Vps28 ENSMUSG00000115987 3187 0.981 0.981 - - - - - vacuolar protein sorting 28 [Source:MGI Symbol;Acc:MGI:1914164]
76. Jam3 ENSMUSG00000031990 5781 0.98 0.980 - - - - - junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
77. Picalm ENSMUSG00000039361 3646 0.98 0.980 - - - - - phosphatidylinositol binding clathrin assembly protein [Source:MGI Symbol;Acc:MGI:2385902]
78. Aurkaip1 ENSMUSG00000065990 4804 0.98 0.980 - - - - - aurora kinase A interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913327]
79. Rps6kb1 ENSMUSG00000020516 4554 0.978 0.978 - - - - - ribosomal protein S6 kinase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1270849]
80. Ago1 ENSMUSG00000041530 7703 0.977 0.977 - - - - - argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
81. Tmcc1 ENSMUSG00000030126 2753 0.976 0.976 - - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
82. Amotl2 ENSMUSG00000032531 4205 0.975 0.975 - - - - - angiomotin-like 2 [Source:MGI Symbol;Acc:MGI:1929286]
83. Smad3 ENSMUSG00000032402 3672 0.973 0.973 - - - - - SMAD family member 3 [Source:MGI Symbol;Acc:MGI:1201674]
84. Msantd4 ENSMUSG00000041124 1975 0.969 0.969 - - - - - Myb/SANT-like DNA-binding domain containing 4 with coiled-coils [Source:MGI Symbol;Acc:MGI:1925350]
85. Romo1 ENSMUSG00000067847 9607 0.968 0.968 - - - - - reactive oxygen species modulator 1 [Source:MGI Symbol;Acc:MGI:1914317]
86. Aars ENSMUSG00000031960 9515 0.966 0.966 - - - - - alanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2384560]
87. Pabpc4 ENSMUSG00000011257 4240 0.965 0.965 - - - - - poly(A) binding protein, cytoplasmic 4 [Source:MGI Symbol;Acc:MGI:2385206]
88. Tmed10 ENSMUSG00000021248 13770 0.964 0.964 - - - - - transmembrane p24 trafficking protein 10 [Source:MGI Symbol;Acc:MGI:1915831]
89. Pcbp4 ENSMUSG00000023495 4918 0.963 0.963 - - - - - poly(rC) binding protein 4 [Source:MGI Symbol;Acc:MGI:1890471]
90. Prpf8 ENSMUSG00000020850 7668 0.953 0.953 - - - - - pre-mRNA processing factor 8 [Source:MGI Symbol;Acc:MGI:2179381]
91. Rpl29 ENSMUSG00000048758 10651 0.949 0.949 - - - - - ribosomal protein L29 [Source:MGI Symbol;Acc:MGI:99687]
92. Map4k4 ENSMUSG00000026074 13259 0.947 0.947 - - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:MGI Symbol;Acc:MGI:1349394]
93. Chd7 ENSMUSG00000041235 7625 0.946 0.946 - - - - - chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
94. Ssr3 ENSMUSG00000027828 4590 0.944 0.944 - - - - - signal sequence receptor, gamma [Source:MGI Symbol;Acc:MGI:1914687]
95. Cnpy2 ENSMUSG00000025381 4468 0.943 0.943 - - - - - canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
96. Rpl21 ENSMUSG00000041453 17373 0.94 0.940 - - - - - ribosomal protein L21 [Source:MGI Symbol;Acc:MGI:1278340]
97. Prrc2c ENSMUSG00000040225 9713 0.934 0.934 - - - - - proline-rich coiled-coil 2C [Source:MGI Symbol;Acc:MGI:1913754]
98. Eif4a1 ENSMUSG00000059796 10496 0.932 0.932 - - - - - eukaryotic translation initiation factor 4A1 [Source:MGI Symbol;Acc:MGI:95303]
99. Ankrd11 ENSMUSG00000035569 7854 0.93 0.930 - - - - - ankyrin repeat domain 11 [Source:MGI Symbol;Acc:MGI:1924337]
100. Dut ENSMUSG00000027203 11820 0.928 0.928 - - - - - deoxyuridine triphosphatase [Source:MGI Symbol;Acc:MGI:1346051]

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA