Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cldn3

Gene Name Gene ID Reads Annotation
Cldn3 ENSMUSG00000070473 65 claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]







Genes with expression patterns similar to Cldn3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cldn3 ENSMUSG00000070473 65 6 1.000 1.000 1.000 1.000 1.000 1.000 claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]
2. Wdr59 ENSMUSG00000031959 222 1.685 0.856 - 0.829 - - - WD repeat domain 59 [Source:MGI Symbol;Acc:MGI:2442115]
3. Zfp879 ENSMUSG00000044296 77 0.99 - - 0.990 - - - zinc finger protein 879 [Source:MGI Symbol;Acc:MGI:3053099]
4. Gm12459 ENSMUSG00000083153 32 0.982 - - 0.982 - - - predicted gene 12459 [Source:MGI Symbol;Acc:MGI:3651071]
5. Acsm3 ENSMUSG00000030935 8 0.981 - - 0.981 - - - acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
6. Nbeal2 ENSMUSG00000056724 47 0.981 - - 0.981 - - - neurobeachin-like 2 [Source:MGI Symbol;Acc:MGI:2448554]
7. Gm22897 ENSMUSG00000105400, ENSMUSG00000106272 7 0.981 - - 0.981 - - - predicted gene, 22897 [Source:MGI Symbol;Acc:MGI:5452674]
8. Mb ENSMUSG00000018893 25 0.981 - - 0.981 - - - myoglobin [Source:MGI Symbol;Acc:MGI:96922]
9. Gm21098 Gm21098 9 0.981 - - 0.981 - - -
10. Gm11483 ENSMUSG00000083943 8 0.981 - - 0.981 - - - predicted gene 11483 [Source:MGI Symbol;Acc:MGI:3652237]
11. Gabbr2 ENSMUSG00000039809 53 0.98 - - 0.980 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:MGI Symbol;Acc:MGI:2386030]
12. A930001C03Rik ENSMUSG00000087132 15 0.98 - - 0.980 - - - RIKEN cDNA A930001C03 gene [Source:MGI Symbol;Acc:MGI:2441838]
13. 4933430I17Rik ENSMUSG00000058046 29 0.98 - - 0.980 - - - RIKEN cDNA 4933430I17 gene [Source:MGI Symbol;Acc:MGI:3045314]
14. Gm16070 ENSMUSG00000085125 40 0.98 - - 0.980 - - - predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
15. Mov10l1 ENSMUSG00000015365 22 0.979 - - 0.979 - - - Moloney leukemia virus 10-like 1 [Source:MGI Symbol;Acc:MGI:1891384]
16. Aldh3b2 ENSMUSG00000075296 33 0.979 - - 0.979 - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]
17. Colec11 ENSMUSG00000036655 47 0.979 - - 0.979 - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
18. Fam46b 25 0.978 - - 0.978 - - - family with sequence similarity 46, member B
19. AU015836 ENSMUSG00000081044 36 0.977 - - 0.977 - - - expressed sequence AU015836 [Source:MGI Symbol;Acc:MGI:2147954]
20. 4933408B17Rik ENSMUSG00000049357 33 0.977 - - 0.977 - - - RIKEN cDNA 4933408B17 gene [Source:MGI Symbol;Acc:MGI:3045347]
21. Glb1l ENSMUSG00000026200 115 0.977 - - 0.977 - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
22. Sgms2 ENSMUSG00000050931, ENSMUSG00000116143 74 0.974 - - 0.974 - - - sphingomyelin synthase 2 [Source:MGI Symbol;Acc:MGI:1921692]
23. Bhlhe40 ENSMUSG00000030103 67 0.974 - - 0.974 - - - basic helix-loop-helix family, member e40 [Source:MGI Symbol;Acc:MGI:1097714]
24. Gm9888 ENSMUSG00000052724 44 0.973 - - 0.973 - - - predicted gene 9888 [Source:MGI Symbol;Acc:MGI:3642202]
25. Kbtbd13 ENSMUSG00000054978 79 0.97 - - 0.970 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:MGI Symbol;Acc:MGI:1921742]
26. Gm18294 ENSMUSG00000093416 29 0.968 - - 0.968 - - - predicted gene, 18294 [Source:MGI Symbol;Acc:MGI:5010479]
27. Zpbp ENSMUSG00000020193 26 0.968 - - 0.968 - - - zona pellucida binding protein [Source:MGI Symbol;Acc:MGI:1855701]
28. Phex ENSMUSG00000057457 65 0.967 - - 0.967 - - - phosphate regulating endopeptidase homolog, X-linked [Source:MGI Symbol;Acc:MGI:107489]
29. Kif20a ENSMUSG00000003779 48 0.966 - - 0.966 - - - kinesin family member 20A [Source:MGI Symbol;Acc:MGI:1201682]
30. C920006O11Rik ENSMUSG00000097574 120 0.964 - - 0.964 - - - RIKEN cDNA C920006O11 gene [Source:MGI Symbol;Acc:MGI:2443759]
31. Tnni2 ENSMUSG00000031097 62 0.963 - - 0.963 - - - troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
32. Cdc42bpg ENSMUSG00000024769, ENSMUSG00000107268 97 0.962 - - 0.962 - - - CDC42 binding protein kinase gamma (DMPK-like) [Source:MGI Symbol;Acc:MGI:2652845]
33. Gm13328 ENSMUSG00000081128 29 0.962 - - 0.962 - - - predicted gene 13328 [Source:MGI Symbol;Acc:MGI:3651185]
34. Abcg5 ENSMUSG00000040505 25 0.961 - - 0.961 - - - ATP binding cassette subfamily G member 5 [Source:MGI Symbol;Acc:MGI:1351659]
35. Nptx1 ENSMUSG00000025582 75 0.958 - - 0.958 - - - neuronal pentraxin 1 [Source:MGI Symbol;Acc:MGI:107811]
36. Tstd2 ENSMUSG00000035495 62 0.958 - - 0.958 - - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 [Source:MGI Symbol;Acc:MGI:3039624]
37. Ptpn3 ENSMUSG00000038764 94 0.956 - - 0.956 - - - protein tyrosine phosphatase, non-receptor type 3 [Source:MGI Symbol;Acc:MGI:105307]
38. Ero1lb ENSMUSG00000057069 171 0.956 - - 0.956 - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
39. Gm12097 ENSMUSG00000081887 11 0.955 0.955 - - - - - predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
40. Chst5 ENSMUSG00000031952 39 0.953 - - 0.953 - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 [Source:MGI Symbol;Acc:MGI:1931825]
41. Ago4 ENSMUSG00000042500 110 0.953 - - 0.953 - - - argonaute RISC catalytic subunit 4 [Source:MGI Symbol;Acc:MGI:1924100]
42. 6430548M08Rik ENSMUSG00000031824 316 0.951 - - 0.951 - - - RIKEN cDNA 6430548M08 gene [Source:MGI Symbol;Acc:MGI:2443793]
43. Kremen1 ENSMUSG00000020393 424 0.951 - - 0.951 - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
44. BC042782 BC042782 63 0.949 - - 0.949 - - -
45. Gm3636 ENSMUSG00000091754 235 0.949 - - 0.949 - - - predicted gene 3636 [Source:MGI Symbol;Acc:MGI:3781812]
46. 4732491K20Rik ENSMUSG00000097350 92 0.948 - - 0.948 - - - RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]
47. Il3ra ENSMUSG00000068758 25 0.946 - - 0.946 - - - interleukin 3 receptor, alpha chain [Source:MGI Symbol;Acc:MGI:96553]
48. Nespos Nespos 46 0.946 - - 0.946 - - -
49. Oxsm ENSMUSG00000021786 115 0.946 - - 0.946 - - - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
50. Rab3d ENSMUSG00000019066 139 0.944 - - 0.944 - - - RAB3D, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97844]
51. Tac2 ENSMUSG00000025400 746 0.943 - - 0.943 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
52. Lgals7 ENSMUSG00000053522 36 0.942 - - 0.942 - - - lectin, galactose binding, soluble 7 [Source:MGI Symbol;Acc:MGI:1316742]
53. Adam9 ENSMUSG00000031555 184 0.941 - - 0.941 - - - a disintegrin and metallopeptidase domain 9 (meltrin gamma) [Source:MGI Symbol;Acc:MGI:105376]
54. Grhl3 ENSMUSG00000037188 211 0.941 - - 0.941 - - - grainyhead like transcription factor 3 [Source:MGI Symbol;Acc:MGI:2655333]
55. P2rx7 ENSMUSG00000029468 35 0.941 - - 0.941 - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:MGI Symbol;Acc:MGI:1339957]
56. Prrt4 ENSMUSG00000079654 149 0.941 - - 0.941 - - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
57. Rps27 ENSMUSG00000090733 17 0.941 - - 0.941 - - - ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1888676]
58. Rinl ENSMUSG00000051735 71 0.939 - - 0.939 - - - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
59. Gpr126 Gpr126 318 0.938 - - 0.938 - - -
60. Mmp9 ENSMUSG00000017737 16 0.937 0.937 - - - - - matrix metallopeptidase 9 [Source:MGI Symbol;Acc:MGI:97011]
61. Slc8b1 ENSMUSG00000032754 147 0.935 - - 0.935 - - - solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 [Source:MGI Symbol;Acc:MGI:2180781]
62. Gng7 ENSMUSG00000048240 207 0.934 - - 0.934 - - - guanine nucleotide binding protein (G protein), gamma 7 [Source:MGI Symbol;Acc:MGI:95787]
63. Fam212b 49 0.933 - - 0.933 - - - family with sequence similarity 212, member B, transcript variant X1
64. Cpeb2 ENSMUSG00000039782 373 0.932 - - 0.932 - - - cytoplasmic polyadenylation element binding protein 2 [Source:MGI Symbol;Acc:MGI:2442640]
65. Gm25072 ENSMUSG00000092974 251 0.928 - - 0.928 - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
66. RNF8 RNF8 23 0.926 0.926 - - - - -
67. Gm9516 ENSMUSG00000081280 11 0.926 0.926 - - - - - predicted gene 9516 [Source:MGI Symbol;Acc:MGI:3779926]
68. 4732465J04Rik ENSMUSG00000101517 8 0.926 0.926 - - - - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
69. Hsbp1l1 ENSMUSG00000078963 61 0.926 0.926 - - - - - heat shock factor binding protein 1-like 1 [Source:MGI Symbol;Acc:MGI:1913505]
70. Ccdc39 ENSMUSG00000027676 104 0.925 - - 0.925 - - - coiled-coil domain containing 39 [Source:MGI Symbol;Acc:MGI:1289263]
71. Neat1 ENSMUSG00000092274 205 0.925 - - 0.925 - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
72. Ccdc142 ENSMUSG00000107499 18 0.924 0.924 - - - - - coiled-coil domain containing 142 [Source:MGI Symbol;Acc:MGI:3045292]
73. Endod1 ENSMUSG00000037419 556 0.924 - - 0.924 - - - endonuclease domain containing 1 [Source:MGI Symbol;Acc:MGI:1919196]
74. Gfi1 ENSMUSG00000029275 21 0.923 - - 0.923 - - - growth factor independent 1 [Source:MGI Symbol;Acc:MGI:103170]
75. Gm6043 ENSMUSG00000075245 56 0.923 0.923 - - - - - predicted gene 6043 [Source:MGI Symbol;Acc:MGI:3805955]
76. Gm6472 ENSMUSG00000095597 22 0.922 0.922 - - - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
77. Pcdhb18 ENSMUSG00000048347 44 0.922 0.922 - - - - - protocadherin beta 18 [Source:MGI Symbol;Acc:MGI:2136756]
78. Ltc4s ENSMUSG00000020377 18 0.922 0.922 - - - - - leukotriene C4 synthase [Source:MGI Symbol;Acc:MGI:107498]
79. Slc16a12 ENSMUSG00000009378 53 0.921 0.921 - - - - - solute carrier family 16 (monocarboxylic acid transporters), member 12 [Source:MGI Symbol;Acc:MGI:2147716]
80. Cox11 ENSMUSG00000020544 17 0.921 0.921 - - - - - cytochrome c oxidase assembly protein 11, copper chaperone [Source:MGI Symbol;Acc:MGI:1917052]
81. Gm12268 ENSMUSG00000083412 82 0.921 - - 0.921 - - - predicted gene 12268 [Source:MGI Symbol;Acc:MGI:3702435]
82. Sgcg ENSMUSG00000035296 66 0.92 0.920 - - - - - sarcoglycan, gamma (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:1346524]
83. Gm8618 ENSMUSG00000073559 115 0.92 0.920 - - - - - predicted gene 8618 [Source:MGI Symbol;Acc:MGI:3647540]
84. Ccdc68 ENSMUSG00000038903 129 0.918 0.918 - - - - - coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
85. Ifi203 ENSMUSG00000039997 17 0.918 0.918 - - - - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
86. Lrrc3b ENSMUSG00000045201 96 0.917 - - 0.917 - - - leucine rich repeat containing 3B [Source:MGI Symbol;Acc:MGI:2384996]
87. Rsl1 ENSMUSG00000058900 68 0.917 0.917 - - - - - regulator of sex limited protein 1 [Source:MGI Symbol;Acc:MGI:3044162]
88. Gm26891 ENSMUSG00000097455 8 0.916 0.916 - - - - - predicted gene, 26891 [Source:MGI Symbol;Acc:MGI:5477385]
89. Gm16292 Gm16292 40 0.916 0.916 - - - - -
90. Ddx58 ENSMUSG00000040296 396 0.915 - - 0.915 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:MGI Symbol;Acc:MGI:2442858]
91. Ankef1 ENSMUSG00000074771 14 0.914 0.914 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:MGI Symbol;Acc:MGI:2441685]
92. Fbxo4 ENSMUSG00000022184 84 0.913 - - 0.913 - - - F-box protein 4 [Source:MGI Symbol;Acc:MGI:2146220]
93. Gad2 ENSMUSG00000026787 118 0.91 0.910 - - - - - glutamic acid decarboxylase 2 [Source:MGI Symbol;Acc:MGI:95634]
94. Zfpm2 ENSMUSG00000022306 343 0.91 - - 0.910 - - - zinc finger protein, multitype 2 [Source:MGI Symbol;Acc:MGI:1334444]
95. Gbp9 ENSMUSG00000029298 11 0.909 - - - - 0.909 - guanylate-binding protein 9 [Source:MGI Symbol;Acc:MGI:3605620]
96. Prr24 Prr24 359 0.908 - - 0.908 - - -
97. Gm26507 ENSMUSG00000097618 43 0.907 0.907 - - - - - predicted gene, 26507 [Source:MGI Symbol;Acc:MGI:5477001]
98. Hist1h3g ENSMUSG00000099517 97 0.907 0.907 - - - - - histone cluster 1, H3g [Source:MGI Symbol;Acc:MGI:2145541]
99. Gm11837 ENSMUSG00000086587 10 0.906 0.906 - - - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
100. Bend5 ENSMUSG00000028545 765 0.905 - - 0.905 - - - BEN domain containing 5 [Source:MGI Symbol;Acc:MGI:1914871]

There are 376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA