Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ckb

Gene Name Gene ID Reads Annotation
Ckb ENSMUSG00000001270 8443 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]







Genes with expression patterns similar to Ckb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ckb ENSMUSG00000001270 8443 6 1.000 1.000 1.000 1.000 1.000 1.000 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
2. Sox2 ENSMUSG00000074637 8409 5.171 0.836 0.865 0.911 0.955 0.835 0.769 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
3. Nrarp ENSMUSG00000078202 1708 5.013 0.921 0.776 0.834 0.844 0.720 0.918 Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
4. Trp53i11 ENSMUSG00000068735 15944 4.97 0.854 0.876 0.889 0.859 0.724 0.768 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
5. Map2 ENSMUSG00000015222 2576 4.593 0.828 0.704 0.806 0.718 0.738 0.799 microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
6. Pou3f2 ENSMUSG00000095139 2416 4.343 0.910 0.823 0.871 0.934 0.805 - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
7. 2610017I09Rik 2610017I09Rik 1595 4.168 0.901 0.761 0.894 0.890 0.722 -
8. Pou3f3 ENSMUSG00000045515 5137 4.164 - 0.852 0.863 0.889 0.843 0.717 POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
9. C130071C03Rik ENSMUSG00000050334 1582 4.145 0.748 0.851 0.811 0.950 0.785 - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
10. Gpr98 Gpr98 1797 4.066 0.902 0.745 0.825 0.793 0.801 -
11. Hes5 ENSMUSG00000048001 1640 4.033 0.823 0.819 0.783 0.835 0.773 - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
12. Srgap3 ENSMUSG00000030257 2941 3.999 0.837 0.729 0.825 0.800 0.808 - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
13. Elavl3 ENSMUSG00000003410 2830 3.929 0.772 - 0.818 0.763 0.813 0.763 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
14. Fabp7 ENSMUSG00000019874 3183 3.854 0.739 0.781 0.795 0.834 0.705 - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
15. Trim2 ENSMUSG00000027993 3587 3.827 0.775 0.744 0.769 0.827 0.712 - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
16. Glra1 ENSMUSG00000000263 586 3.805 0.794 0.780 0.749 0.732 0.750 - glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
17. Rhbdl3 ENSMUSG00000017692 783 3.773 0.716 0.812 0.770 0.763 0.712 - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
18. Sox3 ENSMUSG00000045179 1137 3.407 0.919 0.788 0.901 0.799 - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
19. Phf21b ENSMUSG00000016624 849 3.36 0.789 0.858 0.868 0.845 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
20. Slc1a2 ENSMUSG00000005089 830 3.357 0.791 - 0.716 0.895 - 0.955 solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
21. Miat ENSMUSG00000097767 4258 3.339 0.892 - 0.833 0.890 0.724 - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
22. Hoxc9 ENSMUSG00000036139 4145 3.321 0.765 0.808 0.882 0.866 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
23. Sall3 ENSMUSG00000024565 449 3.308 0.796 - 0.813 0.823 - 0.876 spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
24. Tubb2b ENSMUSG00000045136 41060 3.276 0.718 - 0.943 0.863 0.752 - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
25. Dpysl5 ENSMUSG00000029168 2096 3.25 0.898 - 0.793 0.748 - 0.811 dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
26. Rfx4 ENSMUSG00000020037 455 3.224 0.834 0.719 0.895 0.776 - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
27. Pax3 ENSMUSG00000004872 3095 3.215 0.800 0.724 - 0.838 - 0.853 paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
28. Dtx4 ENSMUSG00000039982 2901 3.195 - 0.768 0.787 0.895 - 0.745 deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
29. Ildr2 ENSMUSG00000040612 1142 3.17 0.802 0.720 - 0.756 - 0.892 immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
30. Hoxb9 ENSMUSG00000020875 2764 3.168 0.818 - 0.772 0.844 0.734 - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
31. Nhlh1 ENSMUSG00000051251 2017 3.149 0.779 0.721 0.856 0.793 - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
32. Map1b ENSMUSG00000052727 28977 3.129 0.754 - 0.786 0.781 - 0.808 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
33. Dll3 ENSMUSG00000003436 1086 3.047 0.808 0.719 0.737 0.783 - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
34. Neurod4 ENSMUSG00000048015 764 2.864 0.737 0.706 0.701 0.720 - - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
35. Apba2 ENSMUSG00000030519 840 2.489 0.884 - 0.804 0.801 - - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
36. Jam2 ENSMUSG00000053062 1020 2.471 0.786 0.782 - 0.903 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
37. Hoxd3 ENSMUSG00000079277 3066 2.442 - - 0.723 0.796 - 0.923 homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
38. Nhlh2 ENSMUSG00000048540 1310 2.404 0.720 - 0.789 0.895 - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
39. Pea15a ENSMUSG00000013698 6011 2.365 - - 0.808 0.805 - 0.752 phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
40. Tuba1a ENSMUSG00000072235 51129 2.355 - - 0.767 0.813 0.775 - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
41. Hes6 ENSMUSG00000067071 1692 2.349 0.856 - 0.736 0.757 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
42. Sox1 ENSMUSG00000096014 349 2.318 0.744 0.751 0.823 - - - SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
43. Btg2 ENSMUSG00000020423 1222 2.301 0.773 - 0.751 0.777 - - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
44. Ago1 ENSMUSG00000041530 7703 2.266 - - 0.742 0.771 0.753 - argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
45. Tubb3 ENSMUSG00000062380 9211 2.263 0.769 - 0.702 0.792 - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
46. Ednrb ENSMUSG00000022122 1909 2.259 0.799 0.745 0.715 - - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
47. Hap1 ENSMUSG00000006930 613 2.243 0.760 0.750 0.733 - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
48. Btbd17 ENSMUSG00000000202 565 2.231 0.723 0.738 0.770 - - - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
49. AI854517 AI854517 539 2.22 - - 0.719 0.783 0.718 -
50. Cotl1 ENSMUSG00000031827 4560 2.22 0.728 - 0.757 - 0.735 - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
51. Myt1 ENSMUSG00000010505 661 2.195 0.734 - 0.732 0.729 - - myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
52. Tmsb4x ENSMUSG00000049775 61014 2.191 0.727 - 0.723 0.741 - - thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
53. Fez1 ENSMUSG00000032118 2537 2.187 - 0.715 0.769 0.703 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
54. Fam181b ENSMUSG00000051515 734 2.186 0.706 0.725 0.755 - - - family with sequence similarity 181, member B [Source:MGI Symbol;Acc:MGI:1930951]
55. Gldc ENSMUSG00000024827 695 2.139 0.702 0.702 0.735 - - - glycine decarboxylase [Source:MGI Symbol;Acc:MGI:1341155]
56. Zic1 ENSMUSG00000032368 7734 1.817 - - - 0.933 0.884 - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
57. Draxin ENSMUSG00000029005 726 1.729 - - - 0.825 - 0.904 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
58. Foxb1 ENSMUSG00000059246 293 1.692 0.835 - 0.857 - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
59. Nes ENSMUSG00000004891 8017 1.687 - - 0.877 0.810 - - nestin [Source:MGI Symbol;Acc:MGI:101784]
60. Ebf1 ENSMUSG00000057098 3112 1.681 - - - 0.816 - 0.865 early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
61. Celsr2 ENSMUSG00000068740 2010 1.675 - - 0.872 0.803 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
62. Tagln3 ENSMUSG00000022658 6054 1.657 - - 0.847 0.810 - - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
63. Sox2ot ENSMUSG00000105265 475 1.633 - - 0.858 0.775 - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
64. Msi1 ENSMUSG00000054256 13785 1.632 - - 0.719 0.913 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
65. Soga3 ENSMUSG00000038916 3972 1.63 - - 0.795 0.835 - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
66. Zic4 ENSMUSG00000036972 1968 1.621 - - - 0.910 0.711 - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
67. Itgb8 ENSMUSG00000025321 698 1.62 0.875 - - 0.745 - - integrin beta 8 [Source:MGI Symbol;Acc:MGI:1338035]
68. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 1.616 - - 0.814 - - 0.802 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
69. Crabp2 ENSMUSG00000004885 6976 1.611 - 0.804 0.807 - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
70. Nova1 ENSMUSG00000021047 658 1.607 0.782 - 0.825 - - - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
71. Enc1 ENSMUSG00000041773 2185 1.606 - - 0.785 0.821 - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
72. Ap3b2 ENSMUSG00000062444 565 1.601 0.761 - 0.840 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
73. Mapk8ip2 ENSMUSG00000022619 910 1.59 - - 0.847 0.743 - - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
74. Scube2 ENSMUSG00000007279 406 1.587 0.811 0.776 - - - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
75. Lmx1b ENSMUSG00000038765 683 1.583 - - - 0.733 - 0.850 LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]
76. Zic3 ENSMUSG00000067860 549 1.574 0.720 - - 0.854 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
77. Zic2 ENSMUSG00000061524 472 1.569 - 0.720 - 0.849 - - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
78. Brsk2 ENSMUSG00000053046 398 1.565 0.815 - 0.750 - - - BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
79. Car2 ENSMUSG00000027562 1176 1.563 0.702 - - - - 0.861 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
80. Gadd45g ENSMUSG00000021453 1925 1.557 - - 0.779 0.778 - - growth arrest and DNA-damage-inducible 45 gamma [Source:MGI Symbol;Acc:MGI:1346325]
81. Spsb4 ENSMUSG00000046997 5432 1.557 0.771 - 0.786 - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
82. Pgpep1 ENSMUSG00000056204 2455 1.554 0.768 - - 0.786 - - pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
83. Hnrnpa1 ENSMUSG00000046434 25429 1.545 - - - 0.801 - 0.744 heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
84. Phyhipl ENSMUSG00000037747 636 1.543 - - 0.724 0.819 - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
85. Zbtb18 ENSMUSG00000063659 1287 1.542 0.837 - - 0.705 - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
86. Rtn1 ENSMUSG00000021087 2547 1.538 0.822 - 0.716 - - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
87. Mkrn1 ENSMUSG00000029922 1839 1.532 - - 0.763 0.769 - - makorin, ring finger protein, 1 [Source:MGI Symbol;Acc:MGI:1859353]
88. Ncan ENSMUSG00000002341 521 1.53 - - 0.726 0.804 - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
89. Plk3 ENSMUSG00000028680 442 1.53 0.753 - 0.777 - - - polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
90. Tspan18 ENSMUSG00000027217 3290 1.518 0.714 - - - - 0.804 tetraspanin 18 [Source:MGI Symbol;Acc:MGI:1917186]
91. Fndc5 ENSMUSG00000001334 1814 1.518 0.711 - - - - 0.807 fibronectin type III domain containing 5 [Source:MGI Symbol;Acc:MGI:1917614]
92. Fam171b ENSMUSG00000048388 2388 1.515 0.772 - - - - 0.743 family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
93. Gbx2 ENSMUSG00000034486 478 1.512 0.752 - - 0.760 - - gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
94. 1700106J16Rik 1700106J16Rik 331 1.508 0.778 - 0.730 - - -
95. 2510009E07Rik ENSMUSG00000043391 672 1.506 0.714 - - 0.792 - - RIKEN cDNA 2510009E07 gene [Source:MGI Symbol;Acc:MGI:1919440]
96. Wscd1 ENSMUSG00000020811 318 1.502 - - 0.723 0.779 - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
97. Pdpn ENSMUSG00000028583, ENSMUSG00000096951 1719 1.5 - - 0.734 0.766 - - podoplanin [Source:MGI Symbol;Acc:MGI:103098]
98. Acot7 ENSMUSG00000028937 5139 1.496 0.707 - 0.789 - - - acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
99. Slc35f1 ENSMUSG00000038602 342 1.494 0.725 - - 0.769 - - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
100. Ptchd2 190 1.489 - - 0.768 0.721 - - patched domain containing 2, transcript variant X2

There are 360 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA