Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cirh1a

Gene Name Gene ID Reads Annotation
Cirh1a 3509 cirrhosis, autosomal recessive 1A (human), transcript variant X1







Genes with expression patterns similar to Cirh1a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cirh1a 3509 6 1.000 1.000 1.000 1.000 1.000 1.000 cirrhosis, autosomal recessive 1A (human), transcript variant X1
2. Kdm4b ENSMUSG00000024201 1440 1.527 0.719 - - - - 0.808 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
3. Zzef1 ENSMUSG00000055670 953 1.525 0.707 - - - - 0.818 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
4. Mrpl37 ENSMUSG00000028622 2555 1.519 - 0.747 - - - 0.772 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
5. Leprot ENSMUSG00000035212 3389 1.489 - 0.748 - - - 0.741 leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
6. Mt2 ENSMUSG00000031762 1817 1.478 - - - 0.749 - 0.729 metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
7. Chic2 ENSMUSG00000029229 3175 1.427 - 0.715 - - - 0.712 cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
8. Ttk ENSMUSG00000038379 2908 1.423 - 0.707 - - - 0.716 Ttk protein kinase [Source:MGI Symbol;Acc:MGI:1194921]
9. Ranbp3 ENSMUSG00000002372 2738 0.98 0.980 - - - - - RAN binding protein 3 [Source:MGI Symbol;Acc:MGI:1919060]
10. Aasdhppt ENSMUSG00000025894 3055 0.976 0.976 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
11. Golga1 ENSMUSG00000026754 889 0.97 0.970 - - - - - golgi autoantigen, golgin subfamily a, 1 [Source:MGI Symbol;Acc:MGI:1924149]
12. Gpaa1 ENSMUSG00000022561 4947 0.944 0.944 - - - - - GPI anchor attachment protein 1 [Source:MGI Symbol;Acc:MGI:1202392]
13. Ppp1cc ENSMUSG00000004455 7445 0.942 0.942 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:MGI Symbol;Acc:MGI:104872]
14. Uqcrh ENSMUSG00000063882 9620 0.936 0.936 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:MGI Symbol;Acc:MGI:1913826]
15. Snhg1 ENSMUSG00000108414 10005 0.935 0.935 - - - - - small nucleolar RNA host gene 1 [Source:MGI Symbol;Acc:MGI:3763743]
16. Mtch1 ENSMUSG00000024012 7467 0.911 0.911 - - - - - mitochondrial carrier 1 [Source:MGI Symbol;Acc:MGI:1929261]
17. Rpa2 ENSMUSG00000028884 4921 0.91 0.910 - - - - - replication protein A2 [Source:MGI Symbol;Acc:MGI:1339939]
18. Stt3b ENSMUSG00000032437 11214 0.892 0.892 - - - - - STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915542]
19. Dhx15 ENSMUSG00000029169 14337 0.868 0.868 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 15 [Source:MGI Symbol;Acc:MGI:1099786]
20. Wdfy3 ENSMUSG00000043940 14795 0.855 0.855 - - - - - WD repeat and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:1096875]
21. Ppp2ca ENSMUSG00000020349 20223 0.844 0.844 - - - - - protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform [Source:MGI Symbol;Acc:MGI:1321159]
22. Cggbp1 ENSMUSG00000054604 5693 0.843 - - - - - 0.843 CGG triplet repeat binding protein 1 [Source:MGI Symbol;Acc:MGI:2146370]
23. Ipo4 ENSMUSG00000002319 1588 0.838 - - - - - 0.838 importin 4 [Source:MGI Symbol;Acc:MGI:1923001]
24. Ninl ENSMUSG00000068115 1268 0.836 - - - - - 0.836 ninein-like [Source:MGI Symbol;Acc:MGI:1925427]
25. Calcoco1 ENSMUSG00000023055 808 0.832 - - - - - 0.832 calcium binding and coiled coil domain 1 [Source:MGI Symbol;Acc:MGI:1914738]
26. Slc30a5 ENSMUSG00000021629 839 0.831 - - - - - 0.831 solute carrier family 30 (zinc transporter), member 5 [Source:MGI Symbol;Acc:MGI:1916298]
27. Coro2b ENSMUSG00000041729 1484 0.828 - - - - - 0.828 coronin, actin binding protein, 2B [Source:MGI Symbol;Acc:MGI:2444283]
28. Cep128 ENSMUSG00000061533 494 0.828 - - - - - 0.828 centrosomal protein 128 [Source:MGI Symbol;Acc:MGI:1922466]
29. 3110082I17Rik ENSMUSG00000053553 775 0.827 - - - - - 0.827 RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
30. Tpp2 ENSMUSG00000041763 3969 0.827 - - - - - 0.827 tripeptidyl peptidase II [Source:MGI Symbol;Acc:MGI:102724]
31. Nup62 ENSMUSG00000109511 3016 0.824 - 0.824 - - - - nucleoporin 62 [Source:MGI Symbol;Acc:MGI:1351500]
32. Asah1 ENSMUSG00000031591 856 0.823 - - - - - 0.823 N-acylsphingosine amidohydrolase 1 [Source:MGI Symbol;Acc:MGI:1277124]
33. Ccdc91 ENSMUSG00000030301 664 0.823 - - - - - 0.823 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
34. Vimp 1184 0.823 - - - - - 0.823 VCP-interacting membrane protein
35. Paxbp1 ENSMUSG00000022974 322 0.822 - - - - - 0.822 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
36. Pfkfb2 ENSMUSG00000026409 480 0.822 - - - - - 0.822 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
37. Dusp2 ENSMUSG00000027368 534 0.822 - - - - - 0.822 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
38. Gpr108 ENSMUSG00000005823 539 0.821 - - - - - 0.821 G protein-coupled receptor 108 [Source:MGI Symbol;Acc:MGI:1925558]
39. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.82 - - - - - 0.820 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
40. Coq3 ENSMUSG00000028247 463 0.82 - - - - - 0.820 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
41. Map4k2 ENSMUSG00000024948, ENSMUSG00000106850 1019 0.818 - - - - - 0.818 mitogen-activated protein kinase kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346883]
42. Stbd1 ENSMUSG00000047963 377 0.816 - - - - - 0.816 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
43. Bcr ENSMUSG00000009681 588 0.816 - - - - - 0.816 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
44. Phf19 ENSMUSG00000026873 83 0.816 - - - - - 0.816 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
45. Sh3rf2 ENSMUSG00000057719 60 0.815 - - - - - 0.815 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
46. 5930412G12Rik ENSMUSG00000072591 503 0.815 - - - - - 0.815 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
47. Il17d ENSMUSG00000050222 119 0.815 - - - - - 0.815 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
48. Gm14286 ENSMUSG00000087445 166 0.815 - - - - - 0.815 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
49. Hes3 ENSMUSG00000028946 73 0.815 - - - - - 0.815 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
50. 2210016L21Rik ENSMUSG00000029559 1199 0.815 - - - - - 0.815 RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
51. Gm10307 ENSMUSG00000101093 159 0.814 - - - - - 0.814 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
52. Cish ENSMUSG00000032578 239 0.814 - - - - - 0.814 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
53. Tfam ENSMUSG00000003923 5233 0.814 - - - - - 0.814 transcription factor A, mitochondrial [Source:MGI Symbol;Acc:MGI:107810]
54. Adcy1 ENSMUSG00000020431 381 0.814 - - - - - 0.814 adenylate cyclase 1 [Source:MGI Symbol;Acc:MGI:99677]
55. Mbd1 ENSMUSG00000024561 619 0.813 - - - - - 0.813 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
56. Gm24451 ENSMUSG00000065287 57 0.813 - - - - - 0.813 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
57. Adprm ENSMUSG00000020910 649 0.813 - - - - - 0.813 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent [Source:MGI Symbol;Acc:MGI:1913608]
58. Ftx ENSMUSG00000086370 285 0.813 - - - - - 0.813 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
59. Dtd1 ENSMUSG00000027430 447 0.812 - - - - - 0.812 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
60. Hddc3 ENSMUSG00000030532 213 0.812 - - - - - 0.812 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
61. 9130023H24Rik ENSMUSG00000062944 258 0.812 - - - - - 0.812 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
62. Lhpp ENSMUSG00000030946 365 0.812 - - - - - 0.812 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
63. Lgr5 ENSMUSG00000020140 516 0.811 - - - - - 0.811 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
64. Trak1 ENSMUSG00000032536 705 0.811 - - - - - 0.811 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
65. Prkaa1 ENSMUSG00000050697 591 0.81 - - - - - 0.810 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
66. Ostm1 ENSMUSG00000038280 208 0.81 - - - - - 0.810 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
67. Gm13910 ENSMUSG00000063684 126 0.81 - - - - - 0.810 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
68. Zfyve19 ENSMUSG00000068580 337 0.809 - - - - - 0.809 zinc finger, FYVE domain containing 19 [Source:MGI Symbol;Acc:MGI:1919258]
69. Htr1b ENSMUSG00000049511 77 0.809 - - - - - 0.809 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
70. Pdp2 ENSMUSG00000048371 637 0.809 - - - - - 0.809 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
71. Fancl ENSMUSG00000004018 569 0.808 - - - - - 0.808 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
72. Atp8a1 ENSMUSG00000037685 1155 0.808 - - - - - 0.808 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
73. Gm13476 Gm13476 165 0.808 - - - - - 0.808
74. Tmub2 ENSMUSG00000034757 856 0.807 - - - - - 0.807 transmembrane and ubiquitin-like domain containing 2 [Source:MGI Symbol;Acc:MGI:1919303]
75. Ankrd16 ENSMUSG00000047909 1130 0.807 - - - - - 0.807 ankyrin repeat domain 16 [Source:MGI Symbol;Acc:MGI:2444796]
76. Fam131a ENSMUSG00000050821 113 0.807 - - - - - 0.807 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
77. Dfna5 492 0.807 - - - - - 0.807 deafness, autosomal dominant 5 (human), transcript variant X3
78. Polr2c ENSMUSG00000031783 1639 0.807 - - - - - 0.807 polymerase (RNA) II (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:109299]
79. Hbb-bs ENSMUSG00000052305 2551 0.807 - - - - - 0.807 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
80. Zfp259 Zfp259 2259 0.807 - - - - - 0.807
81. Pik3c2b ENSMUSG00000026447 424 0.807 - - - - - 0.807 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
82. Trp53bp2 ENSMUSG00000026510 1450 0.806 - - - - - 0.806 transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
83. Amd1 ENSMUSG00000075232 1041 0.806 - - - - - 0.806 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
84. Tbc1d25 ENSMUSG00000039201 634 0.806 - - - - - 0.806 TBC1 domain family, member 25 [Source:MGI Symbol;Acc:MGI:2444862]
85. Ptplb Ptplb 1513 0.805 - - - - - 0.805
86. Trdmt1 ENSMUSG00000026723 391 0.804 - - - - - 0.804 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
87. Rufy2 ENSMUSG00000020070 1150 0.804 - - - - - 0.804 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
88. Gja1 ENSMUSG00000050953 1894 0.804 - - - - - 0.804 gap junction protein, alpha 1 [Source:MGI Symbol;Acc:MGI:95713]
89. Ndufb11 ENSMUSG00000031059 4781 0.803 - - - - - 0.803 NADH:ubiquinone oxidoreductase subunit B11 [Source:MGI Symbol;Acc:MGI:1349919]
90. Asb13 ENSMUSG00000033781 402 0.802 - - - - - 0.802 ankyrin repeat and SOCS box-containing 13 [Source:MGI Symbol;Acc:MGI:2145525]
91. Wipi1 ENSMUSG00000041895 3789 0.802 - - - - - 0.802 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
92. Slc7a6 ENSMUSG00000031904 1103 0.802 - - - - - 0.802 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
93. Taz ENSMUSG00000009995 1408 0.801 - - - - - 0.801 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
94. Ufsp1 ENSMUSG00000051502 251 0.801 - - - - - 0.801 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
95. Phf12 ENSMUSG00000037791 554 0.801 - - - - - 0.801 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
96. Tnks2 ENSMUSG00000024811 9178 0.8 - 0.800 - - - - tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 [Source:MGI Symbol;Acc:MGI:1921743]
97. Recql5 ENSMUSG00000020752 591 0.8 - - - - - 0.800 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
98. Acsl6 ENSMUSG00000020333 249 0.8 - - - - - 0.800 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
99. Ppt2 ENSMUSG00000015474 321 0.799 - - - - - 0.799 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
100. Car2 ENSMUSG00000027562 1176 0.799 - - - - - 0.799 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA