Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chrna5

Gene Name Gene ID Reads Annotation
Chrna5 ENSMUSG00000035594 21 cholinergic receptor, nicotinic, alpha polypeptide 5 [Source:MGI Symbol;Acc:MGI:87889]







Genes with expression patterns similar to Chrna5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chrna5 ENSMUSG00000035594 21 6 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, alpha polypeptide 5 [Source:MGI Symbol;Acc:MGI:87889]
2. Npff ENSMUSG00000023052 4 1.739 - - - - 0.910 0.829 neuropeptide FF-amide peptide precursor [Source:MGI Symbol;Acc:MGI:1891708]
3. Gm11686 ENSMUSG00000080711 10 1 - - - - 1.000 - predicted gene 11686 [Source:MGI Symbol;Acc:MGI:3652311]
4. Gm5507 ENSMUSG00000069376 24 1 - 1.000 - - - - predicted gene 5507 [Source:MGI Symbol;Acc:MGI:3648656]
5. Cryba1 ENSMUSG00000000724 20 1 - 1.000 - - - - crystallin, beta A1 [Source:MGI Symbol;Acc:MGI:88518]
6. Elf5 ENSMUSG00000027186 1 1 - - - - 1.000 - E74-like factor 5 [Source:MGI Symbol;Acc:MGI:1335079]
7. Mgat4c ENSMUSG00000019888 9 1 - 1.000 - - - - MGAT4 family, member C [Source:MGI Symbol;Acc:MGI:1914819]
8. Ern2 ENSMUSG00000030866 6 1 - 1.000 - - - - endoplasmic reticulum (ER) to nucleus signalling 2 [Source:MGI Symbol;Acc:MGI:1349436]
9. Gpr45 ENSMUSG00000041907 12 0.95 - 0.950 - - - - G protein-coupled receptor 45 [Source:MGI Symbol;Acc:MGI:2135882]
10. Vamp7-ps ENSMUSG00000082519 28 0.94 - - 0.940 - - - vesicle-associated membrane protein 7, pseudogene [Source:MGI Symbol;Acc:MGI:3652239]
11. Gm17308 ENSMUSG00000096922 15 0.94 - - 0.940 - - - predicted gene, 17308 [Source:MGI Symbol;Acc:MGI:4936942]
12. F420014N23Rik ENSMUSG00000097331 21 0.939 - - 0.939 - - - RIKEN cDNA F420014N23 gene [Source:MGI Symbol;Acc:MGI:3642477]
13. Gm13998 ENSMUSG00000081056 13 0.932 - - 0.932 - - - predicted gene 13998 [Source:MGI Symbol;Acc:MGI:3651215]
14. A130057D12Rik A130057D12Rik 29 0.932 - - 0.932 - - -
15. Gm23897 ENSMUSG00000088735 3 0.928 - - 0.928 - - - predicted gene, 23897 [Source:MGI Symbol;Acc:MGI:5453674]
16. Cct6b ENSMUSG00000020698 8 0.925 - - 0.925 - - - chaperonin containing Tcp1, subunit 6b (zeta) [Source:MGI Symbol;Acc:MGI:1329013]
17. 5430427O19Rik ENSMUSG00000025058 9 0.921 - - 0.921 - - - RIKEN cDNA 5430427O19 gene [Source:MGI Symbol;Acc:MGI:1918648]
18. Rbp7 ENSMUSG00000028996 2 0.921 - - 0.921 - - - retinol binding protein 7, cellular [Source:MGI Symbol;Acc:MGI:1890409]
19. Calcoco2 ENSMUSG00000006056 7 0.921 - - 0.921 - - - calcium binding and coiled-coil domain 2 [Source:MGI Symbol;Acc:MGI:1343177]
20. Gm20878 ENSMUSG00000078747 3 0.921 - - 0.921 - - - predicted gene, 20878 [Source:MGI Symbol;Acc:MGI:5434234]
21. Gm15359 Gm15359 4 0.921 - - 0.921 - - -
22. Glra3 ENSMUSG00000038257 8 0.921 - - 0.921 - - - glycine receptor, alpha 3 subunit [Source:MGI Symbol;Acc:MGI:95749]
23. Prl ENSMUSG00000021342 1 0.921 - - 0.921 - - - prolactin [Source:MGI Symbol;Acc:MGI:97762]
24. Gm14857 ENSMUSG00000081289 2 0.921 - - 0.921 - - - predicted gene 14857 [Source:MGI Symbol;Acc:MGI:3716318]
25. Gm26920 ENSMUSG00000058447 4 0.921 - - 0.921 - - - predicted gene, 26920 [Source:MGI Symbol;Acc:MGI:5504035]
26. Fcrl6 ENSMUSG00000070504 5 0.919 - - 0.919 - - - Fc receptor-like 6 [Source:MGI Symbol;Acc:MGI:3618339]
27. Kcnk13 ENSMUSG00000045404 16 0.916 - - 0.916 - - - potassium channel, subfamily K, member 13 [Source:MGI Symbol;Acc:MGI:2384976]
28. Gm13523 ENSMUSG00000087496 15 0.912 - - 0.912 - - - predicted gene 13523 [Source:MGI Symbol;Acc:MGI:3651426]
29. Lmbrd2 ENSMUSG00000039704, ENSMUSG00000116236 49 0.912 - - 0.912 - - - LMBR1 domain containing 2 [Source:NCBI gene;Acc:320506]
30. Vwa3a ENSMUSG00000030889 15 0.911 - - 0.911 - - - von Willebrand factor A domain containing 3A [Source:MGI Symbol;Acc:MGI:3041229]
31. 5430402O13Rik ENSMUSG00000085776 4 0.91 - - - - 0.910 - RIKEN cDNA 5430402O13 gene [Source:MGI Symbol;Acc:MGI:1918631]
32. RP23-452E7.2 RP23-452E7.2 1 0.91 - - - - 0.910 -
33. Gm9936 ENSMUSG00000107108 1 0.91 - - - - 0.910 - predicted gene 9936 [Source:MGI Symbol;Acc:MGI:3641854]
34. A830019P07Rik ENSMUSG00000094707 1 0.91 - - - - 0.910 - RIKEN cDNA A830019P07 gene [Source:MGI Symbol;Acc:MGI:3028035]
35. H2-T10 ENSMUSG00000079491 3 0.91 - - - - 0.910 - histocompatibility 2, T region locus 10 [Source:MGI Symbol;Acc:MGI:95942]
36. R3hdml ENSMUSG00000078949 4 0.91 - - - - 0.910 - R3H domain containing-like [Source:MGI Symbol;Acc:MGI:3650937]
37. Gm8802 ENSMUSG00000081226 4 0.91 - - - - 0.910 - predicted gene 8802 [Source:MGI Symbol;Acc:MGI:3647981]
38. Pdx1 ENSMUSG00000029644 41 0.91 - - - - 0.910 - pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]
39. Nkpd1 ENSMUSG00000060621 2 0.91 - - - - 0.910 - NTPase, KAP family P-loop domain containing 1 [Source:MGI Symbol;Acc:MGI:1916797]
40. Havcr2 ENSMUSG00000020399 3 0.91 - - - - 0.910 - hepatitis A virus cellular receptor 2 [Source:MGI Symbol;Acc:MGI:2159682]
41. Gm15777 ENSMUSG00000085269 1 0.91 - - - - 0.910 - predicted gene 15777 [Source:MGI Symbol;Acc:MGI:3783219]
42. Gm13619 ENSMUSG00000052865 2 0.91 - - - - 0.910 - predicted gene 13619 [Source:MGI Symbol;Acc:MGI:3702958]
43. Lipf ENSMUSG00000024768 8 0.91 - - - - 0.910 - lipase, gastric [Source:MGI Symbol;Acc:MGI:1914967]
44. Fut2 ENSMUSG00000055978 1 0.91 - - - - 0.910 - fucosyltransferase 2 [Source:MGI Symbol;Acc:MGI:109374]
45. Ifi204 ENSMUSG00000073489 8 0.91 - - - - 0.910 - interferon activated gene 204 [Source:MGI Symbol;Acc:MGI:96429]
46. Prl6a1 ENSMUSG00000069259 2 0.91 - - - - 0.910 - prolactin family 6, subfamily a, member 1 [Source:MGI Symbol;Acc:MGI:1206579]
47. Itgae ENSMUSG00000005947 13 0.91 - - - - 0.910 - integrin alpha E, epithelial-associated [Source:MGI Symbol;Acc:MGI:1298377]
48. Crhr1 ENSMUSG00000018634 1 0.91 - - - - 0.910 - corticotropin releasing hormone receptor 1 [Source:MGI Symbol;Acc:MGI:88498]
49. Gm14571 ENSMUSG00000083845 2 0.91 - - - - 0.910 - predicted gene 14571 [Source:MGI Symbol;Acc:MGI:3644699]
50. Ubl7 ENSMUSG00000055720 10 0.91 - - - - 0.910 - ubiquitin-like 7 (bone marrow stromal cell-derived) [Source:MGI Symbol;Acc:MGI:1916709]
51. Gm15741 ENSMUSG00000082825 4 0.91 - - - - 0.910 - predicted gene 15741 [Source:MGI Symbol;Acc:MGI:3783183]
52. Tmem40 ENSMUSG00000059900 110 0.91 - - - - 0.910 - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
53. Gm24246 ENSMUSG00000087940 1 0.91 - - - - 0.910 - predicted gene, 24246 [Source:MGI Symbol;Acc:MGI:5454023]
54. Hao2 ENSMUSG00000027870 3 0.91 - - - - 0.910 - hydroxyacid oxidase 2 [Source:MGI Symbol;Acc:MGI:96012]
55. Gm6407 ENSMUSG00000093548 1 0.91 - - - - 0.910 - predicted gene 6407 [Source:MGI Symbol;Acc:MGI:3642965]
56. Gm10417 ENSMUSG00000103580 12 0.91 - - - - 0.910 - predicted gene 10417 [Source:MGI Symbol;Acc:MGI:3642677]
57. Gm12874 ENSMUSG00000084196 2 0.91 - - - - 0.910 - predicted gene 12874 [Source:MGI Symbol;Acc:MGI:3651901]
58. Gm4776 Gm4776 2 0.91 - - - - 0.910 -
59. 2810459M11Rik ENSMUSG00000026227 11 0.91 - - - - 0.910 - RIKEN cDNA 2810459M11 gene [Source:MGI Symbol;Acc:MGI:1920042]
60. I830012O16Rik I830012O16Rik 1 0.91 - - - - 0.910 -
61. Gm6133 ENSMUSG00000090451 13 0.91 - - - - 0.910 - predicted gene 6133 [Source:MGI Symbol;Acc:MGI:3647029]
62. Gm14074 Gm14074 2 0.907 - - 0.907 - - -
63. 1500002C15Rik ENSMUSG00000096221 22 0.907 - - 0.907 - - - RIKEN cDNA 1500002C15 gene [Source:MGI Symbol;Acc:MGI:1916196]
64. Cdc42bpb ENSMUSG00000021279 23 0.905 - - 0.905 - - - CDC42 binding protein kinase beta [Source:MGI Symbol;Acc:MGI:2136459]
65. Gm1141 ENSMUSG00000073130 43 0.898 - - 0.898 - - - predicted gene 1141 [Source:MGI Symbol;Acc:MGI:2685987]
66. Gm13414 ENSMUSG00000087635 11 0.893 - - 0.893 - - - predicted gene 13414 [Source:MGI Symbol;Acc:MGI:3652154]
67. Nanog ENSMUSG00000012396 16 0.889 - - 0.889 - - - Nanog homeobox [Source:MGI Symbol;Acc:MGI:1919200]
68. Nfkbie ENSMUSG00000023947 41 0.889 - - 0.889 - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon [Source:MGI Symbol;Acc:MGI:1194908]
69. 9530036O11Rik ENSMUSG00000097726 5 0.888 - - 0.888 - - - RIKEN cDNA 9530036O11Rik [Source:MGI Symbol;Acc:MGI:2444607]
70. Gm6480 ENSMUSG00000082894 43 0.886 - - 0.886 - - - predicted pseudogene 6480 [Source:MGI Symbol;Acc:MGI:3647765]
71. Rab40b ENSMUSG00000025170 36 0.884 - - 0.884 - - - Rab40B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2183451]
72. Gm15488 ENSMUSG00000084217 5 0.881 - - 0.881 - - - predicted gene 15488 [Source:MGI Symbol;Acc:MGI:3705835]
73. Cd14 ENSMUSG00000051439 32 0.877 - - 0.877 - - - CD14 antigen [Source:MGI Symbol;Acc:MGI:88318]
74. Gm4518 ENSMUSG00000098123 9 0.874 - - 0.874 - - - predicted gene 4518 [Source:MGI Symbol;Acc:MGI:3782703]
75. Rpl35a-ps7 ENSMUSG00000094557 14 0.874 - - 0.874 - - - ribosomal protein L35A, pseudogene 7 [Source:MGI Symbol;Acc:MGI:3781346]
76. Gm12834 ENSMUSG00000081138 23 0.87 - - 0.870 - - - predicted gene 12834 [Source:MGI Symbol;Acc:MGI:3649428]
77. 2410003L11Rik ENSMUSG00000085860 3 0.869 - - 0.869 - - - RIKEN cDNA 2410003L11 gene [Source:MGI Symbol;Acc:MGI:1916979]
78. Gm17197 ENSMUSG00000090990 3 0.868 - - 0.868 - - - predicted gene 17197 [Source:MGI Symbol;Acc:MGI:4938024]
79. Dmrta1 ENSMUSG00000043753 21 0.868 - - 0.868 - - - doublesex and mab-3 related transcription factor like family A1 [Source:MGI Symbol;Acc:MGI:2653627]
80. Carm1 ENSMUSG00000032185 70 0.867 - - - - 0.867 - coactivator-associated arginine methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913208]
81. Ccl6 ENSMUSG00000018927 44 0.867 - - 0.867 - - - chemokine (C-C motif) ligand 6 [Source:MGI Symbol;Acc:MGI:98263]
82. Gm13219 ENSMUSG00000079604 19 0.864 - - 0.864 - - - predicted gene 13219 [Source:MGI Symbol;Acc:MGI:3651678]
83. Trdn ENSMUSG00000019787 30 0.862 - - 0.862 - - - triadin [Source:MGI Symbol;Acc:MGI:1924007]
84. Rnu12 ENSMUSG00000065176 18 0.862 - - 0.862 - - - RNA U12, small nuclear [Source:MGI Symbol;Acc:MGI:1336893]
85. Tomm6 ENSMUSG00000033475 42 0.861 - - 0.861 - - - translocase of outer mitochondrial membrane 6 [Source:MGI Symbol;Acc:MGI:1913369]
86. Gm1866 ENSMUSG00000082070 14 0.86 - - 0.860 - - - predicted gene 1866 [Source:MGI Symbol;Acc:MGI:3037724]
87. Rpl21-ps12 ENSMUSG00000058700 44 0.858 - - 0.858 - - - ribosomal protein L21, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3648214]
88. Gria1 ENSMUSG00000020524 51 0.858 - - 0.858 - - - glutamate receptor, ionotropic, AMPA1 (alpha 1) [Source:MGI Symbol;Acc:MGI:95808]
89. Hmgxb3 ENSMUSG00000024622 6 0.856 - - 0.856 - - - HMG box domain containing 3 [Source:MGI Symbol;Acc:MGI:2441817]
90. Gm23078 ENSMUSG00000088473 3 0.854 - - 0.854 - - - predicted gene, 23078 [Source:MGI Symbol;Acc:MGI:5452855]
91. Ifltd1 Ifltd1 11 0.851 - - - - 0.851 -
92. Pcdhb3 ENSMUSG00000045498 48 0.851 - - 0.851 - - - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
93. Gm8420 ENSMUSG00000072324 22 0.85 - - 0.850 - - - predicted gene 8420 [Source:MGI Symbol;Acc:MGI:3645594]
94. mmu-mir-7025 mmu-mir-7025 6 0.849 - - 0.849 - - -
95. Sigirr ENSMUSG00000025494 35 0.848 - - 0.848 - - - single immunoglobulin and toll-interleukin 1 receptor (TIR) domain [Source:MGI Symbol;Acc:MGI:1344402]
96. Grhl2 ENSMUSG00000022286 30 0.846 - - 0.846 - - - grainyhead like transcription factor 2 [Source:MGI Symbol;Acc:MGI:2182543]
97. E130114P18Rik ENSMUSG00000048747 36 0.846 - - 0.846 - - - RIKEN cDNA E130114P18 gene [Source:MGI Symbol;Acc:MGI:2442873]
98. 4930444M15Rik ENSMUSG00000097172 7 0.841 - - 0.841 - - - RIKEN cDNA 4930444M15 gene [Source:MGI Symbol;Acc:MGI:1923039]
99. Cd209c ENSMUSG00000040165 11 0.839 - - 0.839 - - - CD209c antigen [Source:MGI Symbol;Acc:MGI:2157945]
100. B430010I23Rik ENSMUSG00000084960 24 0.837 - - 0.837 - - - RIKEN cDNA B430010I23 gene [Source:MGI Symbol;Acc:MGI:1926099]

There are 114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA