Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Chrna3

Gene Name Gene ID Reads Annotation
Chrna3 ENSMUSG00000032303 294 cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]







Genes with expression patterns similar to Chrna3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chrna3 ENSMUSG00000032303 294 6 1.000 1.000 1.000 1.000 1.000 1.000 cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]
2. Pou3f4 ENSMUSG00000056854 95 1.618 - 0.720 0.898 - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
3. Gm3764 ENSMUSG00000097156 474 1.56 - - - 0.820 0.740 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
4. Pax6 ENSMUSG00000027168 2751 1.505 0.790 - 0.715 - - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
5. Ptchd2 190 1.463 - 0.753 - 0.710 - - patched domain containing 2, transcript variant X2
6. Zic2 ENSMUSG00000061524 472 1.457 0.727 - - 0.730 - - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
7. Scube2 ENSMUSG00000007279 406 1.431 0.704 - - - - 0.727 signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
8. Fstl5 ENSMUSG00000034098 64 0.943 - - 0.943 - - - follistatin-like 5 [Source:MGI Symbol;Acc:MGI:2442179]
9. Pdzrn4 ENSMUSG00000036218 102 0.94 - - 0.940 - - - PDZ domain containing RING finger 4 [Source:MGI Symbol;Acc:MGI:3056996]
10. Gm26638 ENSMUSG00000097563 57 0.924 - - 0.924 - - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
11. Nlgn1 ENSMUSG00000063887 37 0.922 - - 0.922 - - - neuroligin 1 [Source:MGI Symbol;Acc:MGI:2179435]
12. Cidea ENSMUSG00000024526 20 0.92 - - 0.920 - - - cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Source:MGI Symbol;Acc:MGI:1270845]
13. Gm26871 ENSMUSG00000097311 68 0.918 - - 0.918 - - - predicted gene, 26871 [Source:MGI Symbol;Acc:MGI:5477365]
14. Evx2 ENSMUSG00000001815 45 0.907 - - 0.907 - - - even-skipped homeobox 2 [Source:MGI Symbol;Acc:MGI:95462]
15. Gbp8 ENSMUSG00000034438 31 0.907 - - 0.907 - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
16. Neurod1 ENSMUSG00000034701 1390 0.902 - - 0.902 - - - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
17. Gm22748 ENSMUSG00000064427 27 0.895 - - 0.895 - - - predicted gene, 22748 [Source:MGI Symbol;Acc:MGI:5452525]
18. Gm16185 ENSMUSG00000084911 290 0.893 - - 0.893 - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
19. Tdrkh ENSMUSG00000041912 78 0.893 - - 0.893 - - - tudor and KH domain containing protein [Source:MGI Symbol;Acc:MGI:1919884]
20. Fbll1 ENSMUSG00000051062 57 0.891 - - 0.891 - - - fibrillarin-like 1 [Source:MGI Symbol;Acc:MGI:3034689]
21. 4930512H18Rik ENSMUSG00000086866 25 0.891 - - 0.891 - - - RIKEN cDNA 4930512H18 gene [Source:MGI Symbol;Acc:MGI:1922361]
22. Gm12468 ENSMUSG00000083985 14 0.889 - - 0.889 - - - predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
23. Ppfia2 ENSMUSG00000053825 97 0.885 - - 0.885 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
24. Gm10338 ENSMUSG00000094706 5 0.884 - - 0.884 - - - predicted gene 10338 [Source:MGI Symbol;Acc:MGI:3642676]
25. Spcs2-ps ENSMUSG00000081888 7 0.884 - - 0.884 - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
26. Gm26861 ENSMUSG00000097009 5 0.884 - - 0.884 - - - predicted gene, 26861 [Source:MGI Symbol;Acc:MGI:5477355]
27. Kcna4 ENSMUSG00000042604 14 0.884 - - 0.884 - - - potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
28. Efhc2 ENSMUSG00000025038 12 0.883 - - 0.883 - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
29. Chrna7 ENSMUSG00000030525 7 0.883 - - 0.883 - - - cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
30. Gm16540 ENSMUSG00000090005 7 0.882 - - 0.882 - - - predicted gene 16540 [Source:MGI Symbol;Acc:MGI:4414960]
31. Gm14706 ENSMUSG00000083482 26 0.881 - - 0.881 - - - predicted gene 14706 [Source:MGI Symbol;Acc:MGI:3646357]
32. BC030499 ENSMUSG00000037593 40 0.879 - - 0.879 - - - cDNA sequence BC030499 [Source:MGI Symbol;Acc:MGI:2652869]
33. Cdh6 ENSMUSG00000039385 40 0.878 - - 0.878 - - - cadherin 6 [Source:MGI Symbol;Acc:MGI:107435]
34. Cacng5 ENSMUSG00000040373 32 0.876 - - 0.876 - - - calcium channel, voltage-dependent, gamma subunit 5 [Source:MGI Symbol;Acc:MGI:2157946]
35. Nkain4 ENSMUSG00000027574 511 0.875 - - 0.875 - - - Na+/K+ transporting ATPase interacting 4 [Source:MGI Symbol;Acc:MGI:1915372]
36. Gm5321 ENSMUSG00000064231 50 0.872 - - 0.872 - - - predicted gene 5321 [Source:MGI Symbol;Acc:MGI:3645266]
37. 1700007L15Rik ENSMUSG00000097318 104 0.871 - - 0.871 - - - RIKEN cDNA 1700007L15 gene [Source:MGI Symbol;Acc:MGI:1916581]
38. Gdap1l1 ENSMUSG00000017943 143 0.871 - - 0.871 - - - ganglioside-induced differentiation-associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2385163]
39. AY074887 ENSMUSG00000044820 41 0.871 - - 0.871 - - - cDNA sequence AY074887 [Source:MGI Symbol;Acc:MGI:3575512]
40. Hmx2 ENSMUSG00000050100 31 0.87 - - 0.870 - - - H6 homeobox 2 [Source:MGI Symbol;Acc:MGI:107159]
41. Vangl1 ENSMUSG00000027860 320 0.869 - - 0.869 - - - VANGL planar cell polarity 1 [Source:MGI Symbol;Acc:MGI:2159344]
42. Nol3 ENSMUSG00000014776 29 0.869 - - 0.869 - - - nucleolar protein 3 (apoptosis repressor with CARD domain) [Source:MGI Symbol;Acc:MGI:1925938]
43. Neil1 ENSMUSG00000032298 123 0.868 - - 0.868 - - - nei endonuclease VIII-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1920024]
44. Gm16222 ENSMUSG00000086798 72 0.865 - - 0.865 - - - predicted gene 16222 [Source:MGI Symbol;Acc:MGI:3801901]
45. Timm8a1 ENSMUSG00000048007 39 0.864 - - 0.864 - - - translocase of inner mitochondrial membrane 8A1 [Source:MGI Symbol;Acc:MGI:1353433]
46. Rasef ENSMUSG00000043003 55 0.864 - - 0.864 - - - RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
47. Hes5 ENSMUSG00000048001 1640 0.863 - - - 0.863 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
48. Cdh8 ENSMUSG00000036510 33 0.86 - - 0.860 - - - cadherin 8 [Source:MGI Symbol;Acc:MGI:107434]
49. Kif9 ENSMUSG00000032489 32 0.859 - - 0.859 - - - kinesin family member 9 [Source:MGI Symbol;Acc:MGI:1098237]
50. Nat8l ENSMUSG00000048142 281 0.858 0.858 - - - - - N-acetyltransferase 8-like [Source:MGI Symbol;Acc:MGI:2447776]
51. Hpgd ENSMUSG00000031613 116 0.858 - - 0.858 - - - hydroxyprostaglandin dehydrogenase 15 (NAD) [Source:MGI Symbol;Acc:MGI:108085]
52. Rpl21-ps15 ENSMUSG00000083596 25 0.857 - - 0.857 - - - ribosomal protein L21, pseudogene 15 [Source:MGI Symbol;Acc:MGI:3705426]
53. 2810455O05Rik ENSMUSG00000085030 37 0.854 - - 0.854 - - - RIKEN cDNA 2810455O05 gene [Source:MGI Symbol;Acc:MGI:1920072]
54. Acvrl1 ENSMUSG00000000530 121 0.852 - - 0.852 - - - activin A receptor, type II-like 1 [Source:MGI Symbol;Acc:MGI:1338946]
55. Gm26112 Gm26112 127 0.85 - - 0.850 - - -
56. Smarca5-ps ENSMUSG00000052912 83 0.85 - - 0.850 - - - SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]
57. Ankrd45 ENSMUSG00000044835 23 0.849 - - 0.849 - - - ankyrin repeat domain 45 [Source:MGI Symbol;Acc:MGI:1921094]
58. Hopx ENSMUSG00000059325 75 0.848 - - 0.848 - - - HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
59. Lepr ENSMUSG00000057722 115 0.846 - - 0.846 - - - leptin receptor [Source:MGI Symbol;Acc:MGI:104993]
60. Wif1 ENSMUSG00000020218 141 0.845 - - 0.845 - - - Wnt inhibitory factor 1 [Source:MGI Symbol;Acc:MGI:1344332]
61. Gm15526 ENSMUSG00000080205 96 0.839 - - 0.839 - - - predicted gene 15526 [Source:MGI Symbol;Acc:MGI:3782973]
62. Gm25777 ENSMUSG00000080364, ENSMUSG00000099277 35 0.838 - - 0.838 - - - predicted gene, 25777 [Source:MGI Symbol;Acc:MGI:5455554]
63. Kpna2 ENSMUSG00000018362 83 0.838 - - 0.838 - - - karyopherin (importin) alpha 2 [Source:MGI Symbol;Acc:MGI:103561]
64. Lrsam1 ENSMUSG00000026792 131 0.834 - - 0.834 - - - leucine rich repeat and sterile alpha motif containing 1 [Source:MGI Symbol;Acc:MGI:2684789]
65. Gm6472 ENSMUSG00000095597 22 0.829 - - 0.829 - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
66. Shd ENSMUSG00000039154 498 0.828 - - 0.828 - - - src homology 2 domain-containing transforming protein D [Source:MGI Symbol;Acc:MGI:1099461]
67. Gm25734 Gm25734 104 0.826 - - 0.826 - - -
68. Rpl31-ps15 ENSMUSG00000097304 63 0.825 - - 0.825 - - - ribosomal protein L31, pseudogene 15 [Source:MGI Symbol;Acc:MGI:3643738]
69. 4921507P07Rik ENSMUSG00000029828 44 0.825 - - 0.825 - - - RIKEN cDNA 4921507P07 gene [Source:MGI Symbol;Acc:MGI:1918071]
70. Erc2 ENSMUSG00000040640 290 0.825 - - 0.825 - - - ELKS/RAB6-interacting/CAST family member 2 [Source:MGI Symbol;Acc:MGI:1098749]
71. Fam154b Fam154b 46 0.825 - - 0.825 - - -
72. Gm14167 ENSMUSG00000087433 40 0.824 - - 0.824 - - - predicted gene 14167 [Source:MGI Symbol;Acc:MGI:3651481]
73. Pfkfb4 ENSMUSG00000025648 262 0.824 - - 0.824 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:MGI Symbol;Acc:MGI:2687284]
74. Art5 ENSMUSG00000070424 81 0.824 - - 0.824 - - - ADP-ribosyltransferase 5 [Source:MGI Symbol;Acc:MGI:107948]
75. Siglech ENSMUSG00000051504 39 0.82 - - 0.820 - - - sialic acid binding Ig-like lectin H [Source:MGI Symbol;Acc:MGI:2443256]
76. Plscr4 ENSMUSG00000032377 53 0.82 - - 0.820 - - - phospholipid scramblase 4 [Source:MGI Symbol;Acc:MGI:2143267]
77. Slc17a6 ENSMUSG00000030500 178 0.818 - - 0.818 - - - solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 [Source:MGI Symbol;Acc:MGI:2156052]
78. Gm24362 ENSMUSG00000097995 279 0.818 - - 0.818 - - - predicted gene, 24362 [Source:MGI Symbol;Acc:MGI:5454139]
79. Gm11516 ENSMUSG00000083764 32 0.817 - - 0.817 - - - predicted gene 11516 [Source:MGI Symbol;Acc:MGI:3649759]
80. Gria2 ENSMUSG00000033981 301 0.815 - - 0.815 - - - glutamate receptor, ionotropic, AMPA2 (alpha 2) [Source:MGI Symbol;Acc:MGI:95809]
81. Rgs7bp ENSMUSG00000021719 144 0.815 - - 0.815 - - - regulator of G-protein signalling 7 binding protein [Source:MGI Symbol;Acc:MGI:106334]
82. Inpp1 ENSMUSG00000026102 176 0.815 - - 0.815 - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
83. Srp54b ENSMUSG00000112449 101 0.812 - - 0.812 - - - signal recognition particle 54B [Source:MGI Symbol;Acc:MGI:3714357]
84. Rnu3a ENSMUSG00000065870, ENSMUSG00000106147 89 0.811 - - 0.811 - - - U3A small nuclear RNA [Source:MGI Symbol;Acc:MGI:97977]
85. Dhx32 ENSMUSG00000030986 165 0.809 - - 0.809 - - - DEAH (Asp-Glu-Ala-His) box polypeptide 32 [Source:MGI Symbol;Acc:MGI:2141813]
86. Nrcam ENSMUSG00000020598 266 0.806 - - - 0.806 - - neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
87. Pde8b ENSMUSG00000021684 54 0.805 - - 0.805 - - - phosphodiesterase 8B [Source:MGI Symbol;Acc:MGI:2443999]
88. Gm11824 ENSMUSG00000082128 50 0.805 - - 0.805 - - - predicted gene 11824 [Source:MGI Symbol;Acc:MGI:3651313]
89. Pomc ENSMUSG00000020660 102 0.805 - - 0.805 - - - pro-opiomelanocortin-alpha [Source:MGI Symbol;Acc:MGI:97742]
90. Dbx1 ENSMUSG00000030507 205 0.803 - - 0.803 - - - developing brain homeobox 1 [Source:MGI Symbol;Acc:MGI:94867]
91. Kif24 ENSMUSG00000028438 185 0.8 - - 0.800 - - - kinesin family member 24 [Source:MGI Symbol;Acc:MGI:1918345]
92. Gnat2 ENSMUSG00000009108 42 0.8 - - 0.800 - - - guanine nucleotide binding protein, alpha transducing 2 [Source:MGI Symbol;Acc:MGI:95779]
93. Ces2b ENSMUSG00000050097 81 0.8 - - 0.800 - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
94. Tmem150a ENSMUSG00000055912, ENSMUSG00000102455 471 0.799 - - 0.799 - - - transmembrane protein 150A [Source:MGI Symbol;Acc:MGI:2385244]
95. Bst2 ENSMUSG00000046718 27 0.798 - - 0.798 - - - bone marrow stromal cell antigen 2 [Source:MGI Symbol;Acc:MGI:1916800]
96. Gm24357 ENSMUSG00000064797 216 0.798 - - 0.798 - - - predicted gene, 24357 [Source:MGI Symbol;Acc:MGI:5454134]
97. Gm16053 ENSMUSG00000083974 34 0.797 - - 0.797 - - - predicted gene 16053 [Source:MGI Symbol;Acc:MGI:3802033]
98. Gm11772 ENSMUSG00000085501 667 0.796 - - 0.796 - - - predicted gene 11772 [Source:MGI Symbol;Acc:MGI:3649468]
99. Fam124b ENSMUSG00000043230 95 0.794 - - 0.794 - - - family with sequence similarity 124, member B [Source:MGI Symbol;Acc:MGI:3026880]
100. Plac1 ENSMUSG00000061082 138 0.794 - - 0.794 - - - placental specific protein 1 [Source:MGI Symbol;Acc:MGI:1926287]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA