Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chmp3

Gene Name Gene ID Reads Annotation
Chmp3 ENSMUSG00000053119 2237 charged multivesicular body protein 3 [Source:MGI Symbol;Acc:MGI:1913950]







Genes with expression patterns similar to Chmp3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chmp3 ENSMUSG00000053119 2237 6 1.000 1.000 1.000 1.000 1.000 1.000 charged multivesicular body protein 3 [Source:MGI Symbol;Acc:MGI:1913950]
2. Tssc1 949 0.893 - 0.893 - - - - tumor suppressing subtransferable candidate 1, transcript variant X3
3. Rnf34 ENSMUSG00000029474 1973 0.881 - 0.881 - - - - ring finger protein 34 [Source:MGI Symbol;Acc:MGI:2153340]
4. Sdad1 ENSMUSG00000029415 2532 0.876 - 0.876 - - - - SDA1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2140779]
5. Ireb2 ENSMUSG00000032293 2276 0.875 - 0.875 - - - - iron responsive element binding protein 2 [Source:MGI Symbol;Acc:MGI:1928268]
6. Pdzd11 ENSMUSG00000015668 1853 0.874 - 0.874 - - - - PDZ domain containing 11 [Source:MGI Symbol;Acc:MGI:1919871]
7. Gm10275 ENSMUSG00000069682 10249 0.873 - 0.873 - - - - predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
8. Erlin1 ENSMUSG00000025198 667 0.873 - 0.873 - - - - ER lipid raft associated 1 [Source:MGI Symbol;Acc:MGI:2387613]
9. Rpp30 ENSMUSG00000024800 2200 0.869 - 0.869 - - - - ribonuclease P/MRP 30 subunit [Source:MGI Symbol;Acc:MGI:1859683]
10. Atp8a1 ENSMUSG00000037685 1155 0.868 - 0.868 - - - - ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
11. Polr2b ENSMUSG00000029250 2820 0.862 - 0.862 - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:MGI Symbol;Acc:MGI:2388280]
12. Arhgap23 ENSMUSG00000049807 1316 0.862 - 0.862 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
13. Dzank1 ENSMUSG00000037259 518 0.862 - 0.862 - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:2139080]
14. Ccar2 ENSMUSG00000033712 2357 0.861 - 0.861 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
15. Pgap1 ENSMUSG00000073678 833 0.861 - 0.861 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
16. Dido1 ENSMUSG00000038914 1891 0.859 - 0.859 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
17. Tmem109 ENSMUSG00000034659 2005 0.859 - 0.859 - - - - transmembrane protein 109 [Source:MGI Symbol;Acc:MGI:1915789]
18. Ube2g2 ENSMUSG00000009293 1035 0.858 - 0.858 - - - - ubiquitin-conjugating enzyme E2G 2 [Source:MGI Symbol;Acc:MGI:1343188]
19. Auh ENSMUSG00000021460 1425 0.858 - 0.858 - - - - AU RNA binding protein/enoyl-coenzyme A hydratase [Source:MGI Symbol;Acc:MGI:1338011]
20. Cirbp ENSMUSG00000045193 1324 0.858 - 0.858 - - - - cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]
21. Lig4 ENSMUSG00000049717 564 0.858 - 0.858 - - - - ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]
22. Tceal3 ENSMUSG00000044550 742 0.858 - 0.858 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
23. Hoxb5 ENSMUSG00000038700 2439 0.857 - 0.857 - - - - homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
24. Heatr5a ENSMUSG00000035181 1099 0.856 - 0.856 - - - - HEAT repeat containing 5A [Source:MGI Symbol;Acc:MGI:2444133]
25. Rrnad1 ENSMUSG00000004896 798 0.856 - 0.856 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
26. Hmmr ENSMUSG00000020330 2775 0.855 - 0.855 - - - - hyaluronan mediated motility receptor (RHAMM) [Source:MGI Symbol;Acc:MGI:104667]
27. Acsl3 ENSMUSG00000032883 1975 0.855 - 0.855 - - - - acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
28. Rnf216 ENSMUSG00000045078 1216 0.854 - 0.854 - - - - ring finger protein 216 [Source:MGI Symbol;Acc:MGI:1344349]
29. Phospho2 ENSMUSG00000027088 921 0.853 - 0.853 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
30. Snapc3 ENSMUSG00000028483 2319 0.853 - 0.853 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
31. Zfp407 ENSMUSG00000048410 2356 0.852 - 0.852 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
32. Ipo9 ENSMUSG00000041879 7282 0.852 - 0.852 - - - - importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
33. 0610010F05Rik ENSMUSG00000042208 755 0.852 - 0.852 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
34. Nsun4 ENSMUSG00000028706 804 0.852 - 0.852 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
35. Ss18 ENSMUSG00000037013 2742 0.852 - 0.852 - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
36. Nampt ENSMUSG00000020572 2131 0.851 - 0.851 - - - - nicotinamide phosphoribosyltransferase [Source:MGI Symbol;Acc:MGI:1929865]
37. Gm10689 ENSMUSG00000074412 328 0.851 - 0.851 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
38. Fndc3a ENSMUSG00000033487 1185 0.85 - 0.850 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
39. Map10 ENSMUSG00000050930 246 0.85 - 0.850 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
40. Aifm1 ENSMUSG00000036932 2751 0.849 - 0.849 - - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:MGI Symbol;Acc:MGI:1349419]
41. Fam102b ENSMUSG00000040339 1195 0.849 - 0.849 - - - - family with sequence similarity 102, member B [Source:MGI Symbol;Acc:MGI:3036259]
42. Chfr ENSMUSG00000014668 1287 0.849 - 0.849 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
43. Zfp609 ENSMUSG00000040524 1316 0.847 - 0.847 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
44. 4933415A04Rik ENSMUSG00000045877 412 0.846 - 0.846 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
45. Eri3 ENSMUSG00000033423 3943 0.846 - 0.846 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
46. Kdm1b ENSMUSG00000038080 577 0.846 - 0.846 - - - - lysine (K)-specific demethylase 1B [Source:MGI Symbol;Acc:MGI:2145261]
47. Ubr1 ENSMUSG00000027272 1633 0.846 - 0.846 - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:MGI Symbol;Acc:MGI:1277977]
48. Dffa ENSMUSG00000028974 1127 0.845 - 0.845 - - - - DNA fragmentation factor, alpha subunit [Source:MGI Symbol;Acc:MGI:1196227]
49. 4632434I11Rik 4632434I11Rik 951 0.845 - 0.845 - - - -
50. Usp31 ENSMUSG00000063317 2365 0.845 - 0.845 - - - - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
51. Cyr61 ENSMUSG00000028195 563 0.844 - 0.844 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
52. Gprasp2 ENSMUSG00000072966 2238 0.844 - 0.844 - - - - G protein-coupled receptor associated sorting protein 2 [Source:MGI Symbol;Acc:MGI:2442071]
53. Rai14 ENSMUSG00000022246 2935 0.844 - 0.844 - - - - retinoic acid induced 14 [Source:MGI Symbol;Acc:MGI:1922896]
54. Sugp2 ENSMUSG00000036054 1239 0.844 - 0.844 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
55. Rps19bp1 ENSMUSG00000051518 828 0.844 - 0.844 - - - - ribosomal protein S19 binding protein 1 [Source:MGI Symbol;Acc:MGI:1913788]
56. Pank1 ENSMUSG00000033610 1083 0.844 - 0.844 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
57. Rrp7a ENSMUSG00000018040 942 0.843 - 0.843 - - - - ribosomal RNA processing 7 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1922028]
58. Aldh5a1 ENSMUSG00000035936 922 0.843 - 0.843 - - - - aldhehyde dehydrogenase family 5, subfamily A1 [Source:MGI Symbol;Acc:MGI:2441982]
59. Cryzl1 ENSMUSG00000058240 2195 0.843 - 0.843 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
60. Tapt1 ENSMUSG00000046985 1206 0.842 - 0.842 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
61. Vps9d1 ENSMUSG00000001062 694 0.842 - 0.842 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
62. Gm15879 ENSMUSG00000084790 387 0.842 - 0.842 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
63. Dpy19l4 ENSMUSG00000045205 962 0.841 - 0.841 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
64. Ubox5 ENSMUSG00000027300 434 0.841 - 0.841 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
65. Prcc ENSMUSG00000004895 527 0.84 - 0.840 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
66. Wnk3 ENSMUSG00000041245 552 0.84 - 0.840 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
67. Gnpda2 ENSMUSG00000029209 182 0.839 - 0.839 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
68. Gm11944 ENSMUSG00000084941 286 0.838 - 0.838 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
69. Usf1 ENSMUSG00000026641 336 0.838 - 0.838 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
70. Saal1 ENSMUSG00000006763 2057 0.838 - 0.838 - - - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
71. Ppp1r15b ENSMUSG00000046062 1778 0.838 - 0.838 - - - - protein phosphatase 1, regulatory subunit 15B [Source:MGI Symbol;Acc:MGI:2444211]
72. C2cd2l ENSMUSG00000032120 223 0.837 - 0.837 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
73. Pigu ENSMUSG00000038383 705 0.837 - 0.837 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
74. Gm16300 ENSMUSG00000089828 225 0.837 - 0.837 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
75. Anapc4 ENSMUSG00000029176 2907 0.837 - 0.837 - - - - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
76. Itfg2 ENSMUSG00000001518 1233 0.836 - 0.836 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
77. Rpl36 ENSMUSG00000057863 918 0.836 - 0.836 - - - - ribosomal protein L36 [Source:MGI Symbol;Acc:MGI:1860603]
78. Gm16536 ENSMUSG00000089810 948 0.836 - 0.836 - - - - predicted gene 16536 [Source:MGI Symbol;Acc:MGI:4414956]
79. Gm8349 ENSMUSG00000098208 124 0.834 - 0.834 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
80. Rab3gap1 ENSMUSG00000036104 515 0.834 - 0.834 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
81. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.834 - 0.834 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
82. Fam132b 102 0.834 - 0.834 - - - - family with sequence similarity 132, member B, transcript variant X3
83. Pdgfb ENSMUSG00000000489 325 0.834 - 0.834 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
84. Gm13652 ENSMUSG00000087333 91 0.834 - 0.834 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
85. Sec11c ENSMUSG00000024516 640 0.833 - 0.833 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
86. Evi5l ENSMUSG00000011832 691 0.833 - 0.833 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
87. Zfp947 ENSMUSG00000063383 396 0.833 - 0.833 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
88. Mns1 ENSMUSG00000032221 1295 0.833 - 0.833 - - - - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
89. AW209491 ENSMUSG00000039182 618 0.833 - 0.833 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
90. Lamtor2 ENSMUSG00000028062 570 0.833 - 0.833 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
91. Gm10307 ENSMUSG00000101093 159 0.832 - 0.832 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
92. Mex3d ENSMUSG00000048696 2206 0.832 - 0.832 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
93. Cdc14a ENSMUSG00000033502 731 0.832 - 0.832 - - - - CDC14 cell division cycle 14A [Source:MGI Symbol;Acc:MGI:2442676]
94. Pan2 ENSMUSG00000005682 912 0.832 - 0.832 - - - - PAN2 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1918984]
95. Gm4335 ENSMUSG00000097989 113 0.832 - 0.832 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
96. Mtx3 ENSMUSG00000021704 616 0.832 - 0.832 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
97. Actr3 ENSMUSG00000026341 4146 0.832 - 0.832 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
98. Rfx5 ENSMUSG00000005774 204 0.831 - 0.831 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
99. Med13l ENSMUSG00000018076 1863 0.831 - 0.831 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
100. Fbn1 ENSMUSG00000027204 960 0.831 - 0.831 - - - - fibrillin 1 [Source:MGI Symbol;Acc:MGI:95489]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA