Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chd9

Gene Name Gene ID Reads Annotation
Chd9 ENSMUSG00000056608 1536 chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]







Genes with expression patterns similar to Chd9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chd9 ENSMUSG00000056608 1536 6 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]
2. Dera ENSMUSG00000030225 1240 1.637 0.726 0.911 - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
3. Tmem26 ENSMUSG00000060044 379 1.633 0.722 0.911 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
4. Ndufb4 ENSMUSG00000022820 1605 1.604 0.725 0.879 - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
5. Uvrag ENSMUSG00000035354 908 1.604 0.719 0.885 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
6. Eed ENSMUSG00000030619 1900 1.586 0.751 0.835 - - - - embryonic ectoderm development [Source:MGI Symbol;Acc:MGI:95286]
7. Scamp1 ENSMUSG00000021687 1701 1.583 0.712 0.871 - - - - secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
8. Dhrs1 ENSMUSG00000002332 3014 0.945 - 0.945 - - - - dehydrogenase/reductase (SDR family) member 1 [Source:MGI Symbol;Acc:MGI:1196314]
9. Ubp1 ENSMUSG00000009741 708 0.94 - 0.940 - - - - upstream binding protein 1 [Source:MGI Symbol;Acc:MGI:104889]
10. Pex2 ENSMUSG00000040374 1030 0.938 - 0.938 - - - - peroxisomal biogenesis factor 2 [Source:MGI Symbol;Acc:MGI:107486]
11. Corin ENSMUSG00000005220 269 0.937 - 0.937 - - - - corin [Source:MGI Symbol;Acc:MGI:1349451]
12. Tmem55b 935 0.935 - 0.935 - - - - transmembrane protein 55b, transcript variant X3
13. Flt3 ENSMUSG00000042817 515 0.931 - 0.931 - - - - FMS-like tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:95559]
14. Ercc4 ENSMUSG00000022545 1268 0.931 - 0.931 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:MGI Symbol;Acc:MGI:1354163]
15. 9930111J21Rik2 ENSMUSG00000069892 1273 0.929 - 0.929 - - - - RIKEN cDNA 9930111J21 gene 2 [Source:MGI Symbol;Acc:MGI:3711310]
16. Kcnk5 ENSMUSG00000023243 191 0.925 - 0.925 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
17. Gm9790 ENSMUSG00000044330 390 0.923 - 0.923 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
18. Gm7327 ENSMUSG00000050900 249 0.923 - 0.923 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
19. Smim4 ENSMUSG00000058351 454 0.922 - 0.922 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
20. Trmt112-ps2 ENSMUSG00000070572 2109 0.922 - 0.922 - - - - tRNA methyltransferase 11-2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651720]
21. 3110052M02Rik 376 0.922 - 0.922 - - - - RIKEN cDNA 3110052M02 gene, transcript variant X10
22. Pdpr ENSMUSG00000033624 123 0.921 - 0.921 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
23. Ptges3l ENSMUSG00000097487 146 0.921 - 0.921 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
24. Usp35 ENSMUSG00000035713 112 0.92 - 0.920 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
25. Fam57a ENSMUSG00000069808 616 0.92 - 0.920 - - - - family with sequence similarity 57, member A [Source:MGI Symbol;Acc:MGI:2151840]
26. Extl1 ENSMUSG00000028838 63 0.92 - 0.920 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
27. Smpd3 ENSMUSG00000031906 194 0.92 - 0.920 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
28. Cd302 ENSMUSG00000060703 214 0.92 - 0.920 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
29. Cyp27a1 ENSMUSG00000026170 153 0.92 - 0.920 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
30. Tmcc1 ENSMUSG00000030126 2753 0.92 - 0.920 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
31. Atg3 ENSMUSG00000022663 1323 0.92 - 0.920 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
32. Zfp71-rs1 Zfp71-rs1 629 0.919 - 0.919 - - - -
33. Zbtb12 ENSMUSG00000049823 373 0.919 - 0.919 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
34. Rpl27-ps2 ENSMUSG00000082171 89 0.919 - 0.919 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
35. Ap2a1 ENSMUSG00000060279 108 0.918 - 0.918 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
36. Ppp4r4 ENSMUSG00000021209 242 0.918 - 0.918 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
37. Stk40 ENSMUSG00000042608 1035 0.918 - 0.918 - - - - serine/threonine kinase 40 [Source:MGI Symbol;Acc:MGI:1921428]
38. AW146154 ENSMUSG00000074166 587 0.918 - 0.918 - - - - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
39. Ccdc12 ENSMUSG00000019659 1494 0.917 - 0.917 - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
40. Slc38a3 ENSMUSG00000010064 147 0.917 - 0.917 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
41. Rab11fip5 ENSMUSG00000051343 496 0.916 - 0.916 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
42. Pabpc4l ENSMUSG00000090919 1259 0.916 - 0.916 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
43. Zfp11 ENSMUSG00000051034 218 0.916 - 0.916 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
44. Rbm12b1 ENSMUSG00000046667 331 0.916 - 0.916 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
45. Gm25734 Gm25734 104 0.916 - 0.916 - - - -
46. Klhl6 ENSMUSG00000043008 952 0.915 - 0.915 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
47. Taf5l ENSMUSG00000038697 1439 0.915 - 0.915 - - - - TATA-box binding protein associated factor 5 like [Source:MGI Symbol;Acc:MGI:1919039]
48. Ift88 ENSMUSG00000040040 557 0.915 - 0.915 - - - - intraflagellar transport 88 [Source:MGI Symbol;Acc:MGI:98715]
49. Cetn4 ENSMUSG00000045031 377 0.915 - 0.915 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
50. Cops8 ENSMUSG00000034432 3968 0.915 - 0.915 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
51. Slc9a3r1 ENSMUSG00000020733 1386 0.914 - 0.914 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 [Source:MGI Symbol;Acc:MGI:1349482]
52. Gmppa ENSMUSG00000033021 462 0.914 - 0.914 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
53. Frg1 ENSMUSG00000031590 1255 0.913 - 0.913 - - - - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
54. Gmds ENSMUSG00000038372 653 0.913 - 0.913 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
55. Harbi1 ENSMUSG00000027243 348 0.913 - 0.913 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
56. Mcc ENSMUSG00000071856 4024 0.913 - 0.913 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
57. Gpbp1 ENSMUSG00000032745 5491 0.913 - 0.913 - - - - GC-rich promoter binding protein 1 [Source:MGI Symbol;Acc:MGI:1920524]
58. Suclg2 ENSMUSG00000061838 465 0.912 - 0.912 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
59. Larp7 ENSMUSG00000027968 2270 0.912 - 0.912 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
60. Apoo ENSMUSG00000079508 815 0.912 - 0.912 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
61. AK129341 AK129341 204 0.911 - 0.911 - - - -
62. Car8 ENSMUSG00000041261 286 0.911 - 0.911 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
63. Plekhm1 ENSMUSG00000034247 251 0.911 - 0.911 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
64. Zfp707 ENSMUSG00000034429 447 0.911 - 0.911 - - - - zinc finger protein 707 [Source:MGI Symbol;Acc:MGI:1916270]
65. Gm26782 ENSMUSG00000097431 428 0.911 - 0.911 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
66. Tmem135 ENSMUSG00000039428 946 0.909 - 0.909 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
67. Dhx34 ENSMUSG00000006019 240 0.909 - 0.909 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
68. Hist1h3c ENSMUSG00000069310 508 0.909 - 0.909 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
69. Gm25735 ENSMUSG00000092905 617 0.908 - 0.908 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
70. 3632451O06Rik 465 0.908 - 0.908 - - - - RIKEN cDNA 3632451O06 gene, transcript variant X2
71. Inadl 509 0.907 - 0.907 - - - - InaD-like (Drosophila), transcript variant X9
72. Pla2g15 ENSMUSG00000031903 321 0.907 - 0.907 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
73. Tmem246 ENSMUSG00000039611 866 0.907 - 0.907 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
74. Cars2 ENSMUSG00000056228 492 0.907 - 0.907 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
75. Zfp865 ENSMUSG00000074405 1223 0.907 - 0.907 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
76. Frk ENSMUSG00000019779 639 0.907 - 0.907 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
77. Tmem186 ENSMUSG00000043140 711 0.906 - 0.906 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
78. Syne4 ENSMUSG00000019737 724 0.905 - 0.905 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
79. Gm12942 332 0.905 - 0.905 - - - - predicted gene 12942
80. Sass6 ENSMUSG00000027959 1229 0.905 - 0.905 - - - - SAS-6 centriolar assembly protein [Source:MGI Symbol;Acc:MGI:1920026]
81. Bckdha ENSMUSG00000060376 653 0.904 - 0.904 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
82. Osbpl11 ENSMUSG00000022807 1117 0.904 - 0.904 - - - - oxysterol binding protein-like 11 [Source:MGI Symbol;Acc:MGI:2146553]
83. Zfp949 ENSMUSG00000032425 816 0.903 - 0.903 - - - - zinc finger protein 949 [Source:MGI Symbol;Acc:MGI:1918890]
84. 2610035D17Rik ENSMUSG00000087259 651 0.903 - 0.903 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
85. Dync2h1 ENSMUSG00000047193 880 0.903 - 0.903 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:MGI Symbol;Acc:MGI:107736]
86. 2010111I01Rik ENSMUSG00000021458 591 0.903 - 0.903 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
87. Cxxc4 ENSMUSG00000044365 723 0.903 - 0.903 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
88. Ifitm1 ENSMUSG00000025491 2242 0.903 - 0.903 - - - - interferon induced transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1915963]
89. Pom121 ENSMUSG00000053293 574 0.902 - 0.902 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
90. Strn ENSMUSG00000024077 1056 0.902 - 0.902 - - - - striatin, calmodulin binding protein [Source:MGI Symbol;Acc:MGI:1333757]
91. Dact2 ENSMUSG00000048826 163 0.902 - 0.902 - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
92. 1700052N19Rik 1700052N19Rik 913 0.902 - 0.902 - - - -
93. Myadm ENSMUSG00000068566, ENSMUSG00000097829 710 0.902 - 0.902 - - - - myeloid-associated differentiation marker [Source:NCBI gene;Acc:50918]
94. Tnfrsf1a ENSMUSG00000030341 711 0.901 - 0.901 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
95. 9930021J03Rik ENSMUSG00000046138 2964 0.901 - 0.901 - - - - RIKEN cDNA 9930021J03 gene [Source:MGI Symbol;Acc:MGI:2444398]
96. 0610009B22Rik ENSMUSG00000007777 752 0.901 - 0.901 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
97. Tbl3 ENSMUSG00000040688 1374 0.901 - 0.901 - - - - transducin (beta)-like 3 [Source:MGI Symbol;Acc:MGI:2384863]
98. Decr2 ENSMUSG00000036775 1047 0.9 - 0.900 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
99. Cbfa2t3 ENSMUSG00000006362 817 0.9 - 0.900 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
100. Mical2 ENSMUSG00000038244 295 0.9 - 0.900 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]

There are 357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA