Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Chd7

Gene Name Gene ID Reads Annotation
Chd7 ENSMUSG00000041235 7625 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]







Genes with expression patterns similar to Chd7

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chd7 ENSMUSG00000041235 7625 6 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
2. Pcbp4 ENSMUSG00000023495 4918 1.822 0.935 - - - - 0.887 poly(rC) binding protein 4 [Source:MGI Symbol;Acc:MGI:1890471]
3. Snrpc ENSMUSG00000024217 5601 1.719 0.822 - - - - 0.897 U1 small nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:109489]
4. Tmbim6 ENSMUSG00000023010 7081 1.661 0.937 - - - - 0.724 transmembrane BAX inhibitor motif containing 6 [Source:MGI Symbol;Acc:MGI:99682]
5. Vcan ENSMUSG00000021614 7436 1.661 0.811 - - - - 0.850 versican [Source:MGI Symbol;Acc:MGI:102889]
6. Hoxc8 ENSMUSG00000001657 16443 1.566 - - - - 0.732 0.834 homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
7. Nes ENSMUSG00000004891 8017 1.473 - - - 0.707 0.766 - nestin [Source:MGI Symbol;Acc:MGI:101784]
8. Map6 ENSMUSG00000055407 476 0.969 - - - - - 0.969 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
9. Slco5a1 ENSMUSG00000025938 586 0.966 - - - - - 0.966 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
10. Plk3 ENSMUSG00000028680 442 0.965 - - - - - 0.965 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
11. Arf2 ENSMUSG00000062421 4459 0.96 - - - - - 0.960 ADP-ribosylation factor 2 [Source:MGI Symbol;Acc:MGI:99595]
12. Prkar2a ENSMUSG00000032601 1406 0.957 - - - - - 0.957 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
13. Mfng ENSMUSG00000018169 425 0.955 - - - - - 0.955 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
14. Ccdc104 Ccdc104 1111 0.955 - - - - - 0.955
15. Zkscan1 ENSMUSG00000029729 2845 0.954 - - - - - 0.954 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
16. Usp42 ENSMUSG00000051306 1252 0.954 - - - - - 0.954 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
17. Ndrg4 ENSMUSG00000036564 629 0.954 - - - - - 0.954 N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
18. Coq10a ENSMUSG00000039914 324 0.954 - - - - - 0.954 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
19. Timm50 ENSMUSG00000003438 2037 0.954 - - - - - 0.954 translocase of inner mitochondrial membrane 50 [Source:MGI Symbol;Acc:MGI:1913775]
20. Heatr6 ENSMUSG00000000976 1640 0.954 - - - - - 0.954 HEAT repeat containing 6 [Source:MGI Symbol;Acc:MGI:1919790]
21. Fbxl6 ENSMUSG00000022559 1084 0.953 - - - - - 0.953 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
22. Zfp131 ENSMUSG00000094870 3397 0.952 - - - - - 0.952 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
23. Tmub1 ENSMUSG00000028958 444 0.952 - - - - - 0.952 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
24. Rragd ENSMUSG00000028278 762 0.952 - - - - - 0.952 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
25. Dnajc21 ENSMUSG00000044224 1073 0.952 - - - - - 0.952 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
26. Xk ENSMUSG00000015342 218 0.952 - - - - - 0.952 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
27. Gm10576 ENSMUSG00000102578 235 0.952 - - - - - 0.952 predicted gene 10576 [Source:MGI Symbol;Acc:MGI:3642535]
28. Neurog2 ENSMUSG00000027967 670 0.952 0.952 - - - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
29. Dym ENSMUSG00000035765 507 0.951 - - - - - 0.951 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
30. Nufip1 ENSMUSG00000022009 2226 0.951 - - - - - 0.951 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
31. Rmrp ENSMUSG00000088088 349 0.951 0.951 - - - - - RNA component of mitochondrial RNAase P [Source:MGI Symbol;Acc:MGI:97937]
32. Bai3 Bai3 552 0.951 0.951 - - - - -
33. Dyrk3 ENSMUSG00000016526 576 0.951 0.951 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 [Source:MGI Symbol;Acc:MGI:1330300]
34. Enah ENSMUSG00000022995 1908 0.951 - - - - - 0.951 ENAH actin regulator [Source:MGI Symbol;Acc:MGI:108360]
35. Syt13 ENSMUSG00000027220 679 0.951 0.951 - - - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
36. Fez1 ENSMUSG00000032118 2537 0.95 0.950 - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
37. Atp6v0c ENSMUSG00000024121 107 0.95 - - - - - 0.950 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
38. Samsn1 ENSMUSG00000022876 406 0.95 0.950 - - - - - SAM domain, SH3 domain and nuclear localization signals, 1 [Source:MGI Symbol;Acc:MGI:1914992]
39. Gm15966 ENSMUSG00000085865 150 0.95 - - - - - 0.950 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
40. Arid3b ENSMUSG00000004661 2972 0.95 - - - - - 0.950 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
41. 0610005C13Rik ENSMUSG00000109644 478 0.95 0.950 - - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
42. Chmp6 ENSMUSG00000025371 1369 0.95 0.950 - - - - - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
43. Gnptg ENSMUSG00000035521 519 0.95 - - - - - 0.950 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
44. Dlg4 ENSMUSG00000020886 393 0.95 0.950 - - - - - discs large MAGUK scaffold protein 4 [Source:MGI Symbol;Acc:MGI:1277959]
45. Wdr60 ENSMUSG00000042050 672 0.95 0.950 - - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
46. 4632415L05Rik ENSMUSG00000048106 222 0.95 - - - - - 0.950 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
47. Ttpal ENSMUSG00000017679 922 0.95 0.950 - - - - - tocopherol (alpha) transfer protein-like [Source:MGI Symbol;Acc:MGI:1923330]
48. Zfp287 ENSMUSG00000005267 876 0.95 0.950 - - - - - zinc finger protein 287 [Source:MGI Symbol;Acc:MGI:2176561]
49. Ccdc68 ENSMUSG00000038903 129 0.95 - - - - - 0.950 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
50. Zfp850 ENSMUSG00000096916 401 0.95 0.950 - - - - - zinc finger protein 850 [Source:MGI Symbol;Acc:MGI:3036281]
51. Vkorc1l1 ENSMUSG00000066735 1190 0.949 - - - - - 0.949 vitamin K epoxide reductase complex, subunit 1-like 1 [Source:MGI Symbol;Acc:MGI:1916818]
52. Mrps25 ENSMUSG00000014551 1972 0.949 0.949 - - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
53. Tstd3 ENSMUSG00000028251 1160 0.949 - - - - - 0.949 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
54. Abcd1 ENSMUSG00000031378 696 0.949 0.949 - - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
55. Pfkl ENSMUSG00000020277 2200 0.949 0.949 - - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
56. Stk11 ENSMUSG00000003068 745 0.949 - - - - - 0.949 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
57. Dtwd2 ENSMUSG00000024505 830 0.949 0.949 - - - - - DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
58. Acyp1 ENSMUSG00000008822 1101 0.949 - - - - - 0.949 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
59. Zfp367 ENSMUSG00000044934 1130 0.949 0.949 - - - - - zinc finger protein 367 [Source:MGI Symbol;Acc:MGI:2442266]
60. Tpd52 ENSMUSG00000027506 1885 0.949 0.949 - - - - - tumor protein D52 [Source:MGI Symbol;Acc:MGI:107749]
61. Adm ENSMUSG00000030790 312 0.949 - - - - - 0.949 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
62. Fam175a 970 0.949 0.949 - - - - - family with sequence similarity 175, member A, transcript variant X2
63. Fam192a ENSMUSG00000031774 2091 0.948 0.948 - - - - - family with sequence similarity 192, member A [Source:MGI Symbol;Acc:MGI:1919637]
64. Mrpl9 ENSMUSG00000028140 1835 0.948 0.948 - - - - - mitochondrial ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:2137211]
65. 2810408I11Rik ENSMUSG00000087213 916 0.948 - - - - - 0.948 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
66. Opa1 ENSMUSG00000038084 1963 0.948 0.948 - - - - - OPA1, mitochondrial dynamin like GTPase [Source:MGI Symbol;Acc:MGI:1921393]
67. Cnnm3 ENSMUSG00000001138 1820 0.948 0.948 - - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
68. Rps6ka1 ENSMUSG00000003644 1196 0.948 0.948 - - - - - ribosomal protein S6 kinase polypeptide 1 [Source:MGI Symbol;Acc:MGI:104558]
69. Pmepa1 ENSMUSG00000038400 1294 0.948 0.948 - - - - - prostate transmembrane protein, androgen induced 1 [Source:MGI Symbol;Acc:MGI:1929600]
70. Gm3244 1303 0.947 0.947 - - - - - predicted pseudogene 3244
71. Wnt5a ENSMUSG00000021994 2387 0.947 0.947 - - - - - wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
72. Rab14 ENSMUSG00000026878 8334 0.947 - - - - - 0.947 RAB14, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915615]
73. Bcl7b ENSMUSG00000029681 996 0.947 - - - - - 0.947 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
74. Gm16344 ENSMUSG00000084824 377 0.947 - - - - - 0.947 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
75. Samd4 ENSMUSG00000021838 1321 0.947 0.947 - - - - - sterile alpha motif domain containing 4 [Source:MGI Symbol;Acc:MGI:1921730]
76. Kcnh2 ENSMUSG00000038319 806 0.947 - - - - - 0.947 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
77. Abhd17c ENSMUSG00000038459 2034 0.947 0.947 - - - - - abhydrolase domain containing 17C [Source:MGI Symbol;Acc:MGI:1917428]
78. Acad9 ENSMUSG00000027710 2657 0.947 0.947 - - - - - acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
79. Taf15 ENSMUSG00000020680 2417 0.947 0.947 - - - - - TATA-box binding protein associated factor 15 [Source:MGI Symbol;Acc:MGI:1917689]
80. Mfap3 ENSMUSG00000020522 5793 0.946 0.946 - - - - - microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
81. Cln3 ENSMUSG00000030720 1100 0.946 0.946 - - - - - ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]
82. Arhgef2 ENSMUSG00000028059 3179 0.946 0.946 - - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
83. Ubap1 ENSMUSG00000028437 2702 0.946 - - - - - 0.946 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
84. Nnt ENSMUSG00000025453, ENSMUSG00000116207 2284 0.946 0.946 - - - - - nicotinamide nucleotide transhydrogenase [Source:MGI Symbol;Acc:MGI:109279]
85. Caskin2 ENSMUSG00000034471 316 0.946 - - - - - 0.946 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
86. Tnrc18 ENSMUSG00000039477 1051 0.946 0.946 - - - - - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
87. Myo9b ENSMUSG00000004677 902 0.946 - - - - - 0.946 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
88. Fam160a2 ENSMUSG00000044465 874 0.946 - - - - - 0.946 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
89. Vps36 ENSMUSG00000031479 2501 0.945 0.945 - - - - - vacuolar protein sorting 36 [Source:MGI Symbol;Acc:MGI:1917410]
90. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.945 - - - - - 0.945 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
91. Cdc25c ENSMUSG00000044201 1273 0.945 - - - - - 0.945 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
92. Sgol2 Sgol2 2618 0.945 0.945 - - - - -
93. Rcl1 ENSMUSG00000024785 1676 0.945 0.945 - - - - - RNA terminal phosphate cyclase-like 1 [Source:MGI Symbol;Acc:MGI:1913275]
94. Plekha1 ENSMUSG00000040268 3807 0.945 0.945 - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:MGI Symbol;Acc:MGI:2442213]
95. Gm15662 Gm15662 1356 0.945 0.945 - - - - -
96. Snx10 ENSMUSG00000038301 2115 0.945 0.945 - - - - - sorting nexin 10 [Source:MGI Symbol;Acc:MGI:1919232]
97. Ccdc34 ENSMUSG00000027160 5334 0.945 0.945 - - - - - coiled-coil domain containing 34 [Source:MGI Symbol;Acc:MGI:1915451]
98. Zfp687 ENSMUSG00000019338 583 0.944 - - - - - 0.944 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
99. Rbm12b1 ENSMUSG00000046667 331 0.944 - - - - - 0.944 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
100. Rgs12 ENSMUSG00000029101 3712 0.944 0.944 - - - - - regulator of G-protein signaling 12 [Source:MGI Symbol;Acc:MGI:1918979]

There are 390 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA