Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chd4

Gene Name Gene ID Reads Annotation
Chd4 ENSMUSG00000063870 11560 chromodomain helicase DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1344380]







Genes with expression patterns similar to Chd4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chd4 ENSMUSG00000063870 11560 6 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1344380]
2. Sms ENSMUSG00000071708 2311 1.515 - 0.744 - - - 0.771 spermine synthase [Source:MGI Symbol;Acc:MGI:109490]
3. Nomo1 ENSMUSG00000030835 5074 0.998 0.998 - - - - - nodal modulator 1 [Source:MGI Symbol;Acc:MGI:2385850]
4. Crabp1 ENSMUSG00000032291 40831 0.993 0.993 - - - - - cellular retinoic acid binding protein I [Source:MGI Symbol;Acc:MGI:88490]
5. Nudcd3 ENSMUSG00000053838 4641 0.992 0.992 - - - - - NudC domain containing 3 [Source:MGI Symbol;Acc:MGI:2144158]
6. Efr3a ENSMUSG00000015002 5598 0.992 0.992 - - - - - EFR3 homolog A [Source:MGI Symbol;Acc:MGI:1923990]
7. Zeb2 ENSMUSG00000026872 5611 0.992 0.992 - - - - - zinc finger E-box binding homeobox 2 [Source:MGI Symbol;Acc:MGI:1344407]
8. Eif4e2 ENSMUSG00000026254 9053 0.992 0.992 - - - - - eukaryotic translation initiation factor 4E member 2 [Source:MGI Symbol;Acc:MGI:1914440]
9. E130311K13Rik ENSMUSG00000048581 4352 0.992 0.992 - - - - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
10. Msh6 ENSMUSG00000005370 4347 0.992 0.992 - - - - - mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]
11. Eps15 ENSMUSG00000028552 3437 0.992 0.992 - - - - - epidermal growth factor receptor pathway substrate 15 [Source:MGI Symbol;Acc:MGI:104583]
12. Tspo ENSMUSG00000041736 2960 0.992 0.992 - - - - - translocator protein [Source:MGI Symbol;Acc:MGI:88222]
13. Capn7 ENSMUSG00000021893 3215 0.992 0.992 - - - - - calpain 7 [Source:MGI Symbol;Acc:MGI:1338030]
14. Fam151b ENSMUSG00000034334 2211 0.992 0.992 - - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
15. Vkorc1 ENSMUSG00000096145 6414 0.992 0.992 - - - - - vitamin K epoxide reductase complex, subunit 1 [Source:MGI Symbol;Acc:MGI:106442]
16. Nexn ENSMUSG00000039103 2837 0.992 0.992 - - - - - nexilin [Source:MGI Symbol;Acc:MGI:1916060]
17. Ell ENSMUSG00000070002 2934 0.992 0.992 - - - - - elongation factor RNA polymerase II [Source:MGI Symbol;Acc:MGI:109377]
18. Drosha ENSMUSG00000022191 6681 0.991 0.991 - - - - - drosha, ribonuclease type III [Source:MGI Symbol;Acc:MGI:1261425]
19. Rad51 ENSMUSG00000027323 4863 0.991 0.991 - - - - - RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890]
20. Mcc ENSMUSG00000071856 4024 0.991 0.991 - - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
21. Rfk ENSMUSG00000024712 5316 0.991 0.991 - - - - - riboflavin kinase [Source:MGI Symbol;Acc:MGI:1914688]
22. Snd1 ENSMUSG00000001424 7054 0.991 0.991 - - - - - staphylococcal nuclease and tudor domain containing 1 [Source:MGI Symbol;Acc:MGI:1929266]
23. Gtf2i ENSMUSG00000060261 13970 0.991 0.991 - - - - - general transcription factor II I [Source:MGI Symbol;Acc:MGI:1202722]
24. Amot ENSMUSG00000041688 7133 0.99 0.990 - - - - - angiomotin [Source:MGI Symbol;Acc:MGI:108440]
25. Dpf2 ENSMUSG00000024826 10503 0.99 0.990 - - - - - D4, zinc and double PHD fingers family 2 [Source:MGI Symbol;Acc:MGI:109529]
26. Sdk2 ENSMUSG00000041592 3074 0.989 0.989 - - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
27. Psme3 ENSMUSG00000078652 16638 0.988 0.988 - - - - - proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) [Source:MGI Symbol;Acc:MGI:1096366]
28. Ncl ENSMUSG00000026234 29206 0.987 0.987 - - - - - nucleolin [Source:MGI Symbol;Acc:MGI:97286]
29. Cox6b1 ENSMUSG00000036751 12215 0.987 0.987 - - - - - cytochrome c oxidase, subunit 6B1 [Source:MGI Symbol;Acc:MGI:107460]
30. Actc1 ENSMUSG00000068614 13555 0.986 0.986 - - - - - actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
31. Gna13 ENSMUSG00000020611 6315 0.986 0.986 - - - - - guanine nucleotide binding protein, alpha 13 [Source:MGI Symbol;Acc:MGI:95768]
32. Rsl1d1 ENSMUSG00000005846 6507 0.978 0.978 - - - - - ribosomal L1 domain containing 1 [Source:MGI Symbol;Acc:MGI:1913659]
33. Cd24a ENSMUSG00000047139 33769 0.973 0.973 - - - - - CD24a antigen [Source:MGI Symbol;Acc:MGI:88323]
34. Cdc42 ENSMUSG00000006699 28155 0.969 0.969 - - - - - cell division cycle 42 [Source:MGI Symbol;Acc:MGI:106211]
35. U2af2 ENSMUSG00000030435 49812 0.969 0.969 - - - - - U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Source:MGI Symbol;Acc:MGI:98886]
36. Rpl39-ps ENSMUSG00000036305 39280 0.951 0.951 - - - - - ribosomal protein L39, pseudogene [Source:MGI Symbol;Acc:MGI:3705781]
37. 1110051M20Rik ENSMUSG00000040591 858 0.845 - - - - - 0.845 RIKEN cDNA 1110051M20 gene [Source:MGI Symbol;Acc:MGI:1915079]
38. Csnk1g2 ENSMUSG00000003345 2074 0.838 - - - - - 0.838 casein kinase 1, gamma 2 [Source:MGI Symbol;Acc:MGI:1920014]
39. Cnot7 ENSMUSG00000031601 3243 0.838 - - - - - 0.838 CCR4-NOT transcription complex, subunit 7 [Source:MGI Symbol;Acc:MGI:1298230]
40. Rock1 ENSMUSG00000024290 4094 0.825 - - - - - 0.825 Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]
41. Tars ENSMUSG00000022241 2426 0.825 - - - - - 0.825 threonyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:106314]
42. Elp5 ENSMUSG00000018565 6591 0.824 - - - - - 0.824 elongator acetyltransferase complex subunit 5 [Source:MGI Symbol;Acc:MGI:1859017]
43. Tmed9 ENSMUSG00000058569 3811 0.821 - - - - - 0.821 transmembrane p24 trafficking protein 9 [Source:MGI Symbol;Acc:MGI:1914761]
44. Palm ENSMUSG00000035863 5081 0.821 - - - - - 0.821 paralemmin [Source:MGI Symbol;Acc:MGI:1261814]
45. Chchd3 ENSMUSG00000053768 3050 0.819 - - - - - 0.819 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:MGI Symbol;Acc:MGI:1913325]
46. Gpr56 Gpr56 969 0.817 - - - - - 0.817
47. Zic5 ENSMUSG00000041703 1240 0.812 - - - - - 0.812 zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
48. Kdm2b ENSMUSG00000029475 5574 0.811 - - - - - 0.811 lysine (K)-specific demethylase 2B [Source:MGI Symbol;Acc:MGI:1354737]
49. Psmd8 ENSMUSG00000030591 12581 0.805 - - - - - 0.805 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 [Source:MGI Symbol;Acc:MGI:1888669]
50. Notch3 ENSMUSG00000038146 7232 0.805 - - - - - 0.805 notch 3 [Source:MGI Symbol;Acc:MGI:99460]
51. Nr2f1 ENSMUSG00000069171 10292 0.803 - - - - - 0.803 nuclear receptor subfamily 2, group F, member 1 [Source:MGI Symbol;Acc:MGI:1352451]
52. Immt ENSMUSG00000052337 4820 0.799 - - - - - 0.799 inner membrane protein, mitochondrial [Source:MGI Symbol;Acc:MGI:1923864]
53. Ttf2 ENSMUSG00000033222 2692 0.792 - - - - - 0.792 transcription termination factor, RNA polymerase II [Source:MGI Symbol;Acc:MGI:1921294]
54. Sqle ENSMUSG00000022351 3055 0.791 - - - - - 0.791 squalene epoxidase [Source:MGI Symbol;Acc:MGI:109296]
55. Gsta4 ENSMUSG00000032348 4113 0.79 - - - - - 0.790 glutathione S-transferase, alpha 4 [Source:MGI Symbol;Acc:MGI:1309515]
56. 2810408I11Rik ENSMUSG00000087213 916 0.789 - - - - - 0.789 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
57. Fbxl6 ENSMUSG00000022559 1084 0.789 - - - - - 0.789 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
58. Zc3h7a ENSMUSG00000037965 1775 0.784 - - - - - 0.784 zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
59. Nufip1 ENSMUSG00000022009 2226 0.784 - - - - - 0.784 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
60. Fam160a2 ENSMUSG00000044465 874 0.783 - - - - - 0.783 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
61. Surf4 ENSMUSG00000014867 4366 0.783 - - - - - 0.783 surfeit gene 4 [Source:MGI Symbol;Acc:MGI:98445]
62. Bcl7b ENSMUSG00000029681 996 0.783 - - - - - 0.783 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
63. Ptpmt1 ENSMUSG00000063235, ENSMUSG00000110860 1572 0.781 - - - - - 0.781 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:66461]
64. Plk3 ENSMUSG00000028680 442 0.78 - - - - - 0.780 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
65. Myeov2 2702 0.78 - - - - - 0.780 myeloma overexpressed 2, transcript variant 2
66. Ankrd11 ENSMUSG00000035569 7854 0.779 - - - - - 0.779 ankyrin repeat domain 11 [Source:MGI Symbol;Acc:MGI:1924337]
67. Shroom4 ENSMUSG00000068270 785 0.779 - - - - - 0.779 shroom family member 4 [Source:MGI Symbol;Acc:MGI:2685570]
68. Rragd ENSMUSG00000028278 762 0.778 - - - - - 0.778 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
69. Man2a2 ENSMUSG00000038886 1255 0.778 - - - - - 0.778 mannosidase 2, alpha 2 [Source:MGI Symbol;Acc:MGI:2150656]
70. Trib1 ENSMUSG00000032501 1194 0.777 - - - - - 0.777 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
71. Zc3hc1 ENSMUSG00000039130 2638 0.777 - - - - - 0.777 zinc finger, C3HC type 1 [Source:MGI Symbol;Acc:MGI:1916023]
72. Dym ENSMUSG00000035765 507 0.777 - - - - - 0.777 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
73. Mfng ENSMUSG00000018169 425 0.776 - - - - - 0.776 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
74. Coq10a ENSMUSG00000039914 324 0.776 - - - - - 0.776 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
75. Zfp131 ENSMUSG00000094870 3397 0.775 - - - - - 0.775 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
76. Slco5a1 ENSMUSG00000025938 586 0.774 - - - - - 0.774 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
77. Gnptg ENSMUSG00000035521 519 0.774 - - - - - 0.774 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
78. Mtmr10 ENSMUSG00000030522 476 0.774 - - - - - 0.774 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
79. Eif2b5 ENSMUSG00000003235 2067 0.773 - - - - - 0.773 eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:MGI Symbol;Acc:MGI:2446176]
80. Rbm12b1 ENSMUSG00000046667 331 0.773 - - - - - 0.773 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
81. Hmgcl ENSMUSG00000028672 2643 0.772 - - - - - 0.772 3-hydroxy-3-methylglutaryl-Coenzyme A lyase [Source:MGI Symbol;Acc:MGI:96158]
82. Pcnxl3 Pcnxl3 1231 0.772 - - - - - 0.772
83. 4632415L05Rik ENSMUSG00000048106 222 0.772 - - - - - 0.772 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
84. Atp6v0c ENSMUSG00000024121 107 0.772 - - - - - 0.772 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
85. Megf10 ENSMUSG00000024593 890 0.771 - - - - - 0.771 multiple EGF-like-domains 10 [Source:MGI Symbol;Acc:MGI:2685177]
86. Ccdc68 ENSMUSG00000038903 129 0.771 - - - - - 0.771 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
87. Usp42 ENSMUSG00000051306 1252 0.771 - - - - - 0.771 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
88. Ndrg4 ENSMUSG00000036564 629 0.771 - - - - - 0.771 N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
89. Tmub1 ENSMUSG00000028958 444 0.771 - - - - - 0.771 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
90. Xk ENSMUSG00000015342 218 0.77 - - - - - 0.770 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
91. Stk11 ENSMUSG00000003068 745 0.77 - - - - - 0.770 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
92. Gm16344 ENSMUSG00000084824 377 0.769 - - - - - 0.769 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
93. Adm ENSMUSG00000030790 312 0.769 - - - - - 0.769 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
94. Caskin2 ENSMUSG00000034471 316 0.768 - - - - - 0.768 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
95. Gm15966 ENSMUSG00000085865 150 0.768 - - - - - 0.768 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
96. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.768 - - - - - 0.768 autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
97. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.768 - - - - - 0.768 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
98. Ccdc104 Ccdc104 1111 0.768 - - - - - 0.768
99. Acyp1 ENSMUSG00000008822 1101 0.768 - - - - - 0.768 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
100. Zfp687 ENSMUSG00000019338 583 0.767 - - - - - 0.767 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]

There are 175 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA