Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chd3

Gene Name Gene ID Reads Annotation
Chd3 ENSMUSG00000018474 12258 chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]







Genes with expression patterns similar to Chd3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chd3 ENSMUSG00000018474 12258 6 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]
2. Luc7l ENSMUSG00000024188 15938 0.947 - 0.947 - - - - Luc7-like [Source:MGI Symbol;Acc:MGI:1914228]
3. Mpped2 ENSMUSG00000016386 5662 0.942 - 0.942 - - - - metallophosphoesterase domain containing 2 [Source:MGI Symbol;Acc:MGI:1924265]
4. Tfg ENSMUSG00000022757 22072 0.856 - 0.856 - - - - Trk-fused gene [Source:MGI Symbol;Acc:MGI:1338041]
5. Kcmf1 ENSMUSG00000055239 3956 0.854 - 0.854 - - - - potassium channel modulatory factor 1 [Source:MGI Symbol;Acc:MGI:1921537]
6. Pdia6 ENSMUSG00000020571 27161 0.844 - 0.844 - - - - protein disulfide isomerase associated 6 [Source:MGI Symbol;Acc:MGI:1919103]
7. Dtymk ENSMUSG00000026281 5051 0.843 - 0.843 - - - - deoxythymidylate kinase [Source:MGI Symbol;Acc:MGI:108396]
8. Pxn ENSMUSG00000029528 5441 0.839 - 0.839 - - - - paxillin [Source:MGI Symbol;Acc:MGI:108295]
9. Syde1 ENSMUSG00000032714 4090 0.819 - 0.819 - - - - synapse defective 1, Rho GTPase, homolog 1 (C. elegans) [Source:MGI Symbol;Acc:MGI:1918959]
10. Phf13 ENSMUSG00000047777 1255 0.813 0.813 - - - - - PHD finger protein 13 [Source:MGI Symbol;Acc:MGI:2446217]
11. Atrnl1 ENSMUSG00000054843 2039 0.81 0.810 - - - - - attractin like 1 [Source:MGI Symbol;Acc:MGI:2147749]
12. Ncaph ENSMUSG00000034906 5603 0.808 - 0.808 - - - - non-SMC condensin I complex, subunit H [Source:MGI Symbol;Acc:MGI:2444777]
13. Sqstm1 ENSMUSG00000015837 4567 0.805 0.805 - - - - - sequestosome 1 [Source:MGI Symbol;Acc:MGI:107931]
14. Morf4l1 ENSMUSG00000062270 33629 0.802 - 0.802 - - - - mortality factor 4 like 1 [Source:MGI Symbol;Acc:MGI:1096551]
15. E430025E21Rik 3136 0.797 0.797 - - - - - RIKEN cDNA E430025E21 gene, transcript variant X1
16. Lztr1 ENSMUSG00000022761 1984 0.792 0.792 - - - - - leucine-zipper-like transcriptional regulator, 1 [Source:MGI Symbol;Acc:MGI:1914113]
17. Pum2 ENSMUSG00000020594 11258 0.79 - 0.790 - - - - pumilio RNA-binding family member 2 [Source:MGI Symbol;Acc:MGI:1931751]
18. Nup93 ENSMUSG00000032939 4440 0.788 0.788 - - - - - nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]
19. Krit1 ENSMUSG00000000600 1627 0.783 0.783 - - - - - KRIT1, ankyrin repeat containing [Source:MGI Symbol;Acc:MGI:1930618]
20. Ap3d1 ENSMUSG00000020198 2925 0.782 0.782 - - - - - adaptor-related protein complex 3, delta 1 subunit [Source:MGI Symbol;Acc:MGI:107734]
21. Tbca ENSMUSG00000042043 14012 0.774 - 0.774 - - - - tubulin cofactor A [Source:MGI Symbol;Acc:MGI:107549]
22. Bcl2l13 ENSMUSG00000009112 1923 0.77 0.770 - - - - - BCL2-like 13 (apoptosis facilitator) [Source:MGI Symbol;Acc:MGI:2136959]
23. Stk16 ENSMUSG00000026201 1005 0.769 0.769 - - - - - serine/threonine kinase 16 [Source:MGI Symbol;Acc:MGI:1313271]
24. Uqcrq ENSMUSG00000044894 19758 0.764 - 0.764 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:MGI Symbol;Acc:MGI:107807]
25. Lasp1 ENSMUSG00000038366 6206 0.763 0.763 - - - - - LIM and SH3 protein 1 [Source:MGI Symbol;Acc:MGI:109656]
26. Rfwd2 1870 0.761 0.761 - - - - - ring finger and WD repeat domain 2, transcript variant X3
27. Tmem41b ENSMUSG00000047554 1081 0.761 0.761 - - - - - transmembrane protein 41B [Source:MGI Symbol;Acc:MGI:1289225]
28. Ppp3cb ENSMUSG00000021816 6623 0.758 0.758 - - - - - protein phosphatase 3, catalytic subunit, beta isoform [Source:MGI Symbol;Acc:MGI:107163]
29. Dcps ENSMUSG00000032040 1164 0.758 0.758 - - - - - decapping enzyme, scavenger [Source:MGI Symbol;Acc:MGI:1916555]
30. 2010107E04Rik 17023 0.757 - 0.757 - - - - RIKEN cDNA 2010107E04 gene, transcript variant X1
31. St8sia2 ENSMUSG00000025789 3710 0.757 0.757 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:106020]
32. Gm10086 ENSMUSG00000060730 2124 0.756 0.756 - - - - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
33. Gstp1 ENSMUSG00000060803, ENSMUSG00000097830 2994 0.753 0.753 - - - - - glutathione S-transferase, pi 1 [Source:MGI Symbol;Acc:MGI:95865]
34. Slc39a9 ENSMUSG00000048833 2916 0.751 0.751 - - - - - solute carrier family 39 (zinc transporter), member 9 [Source:MGI Symbol;Acc:MGI:1914820]
35. 1700025G04Rik ENSMUSG00000032666 2463 0.749 0.749 - - - - - RIKEN cDNA 1700025G04 gene [Source:MGI Symbol;Acc:MGI:1916649]
36. Uba6 ENSMUSG00000035898 1221 0.747 0.747 - - - - - ubiquitin-like modifier activating enzyme 6 [Source:MGI Symbol;Acc:MGI:1913894]
37. Uvrag ENSMUSG00000035354 908 0.746 0.746 - - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
38. Mocs2 ENSMUSG00000015536 1202 0.745 0.745 - - - - - molybdenum cofactor synthesis 2 [Source:MGI Symbol;Acc:MGI:1336894]
39. 6820431F20Rik ENSMUSG00000071796 1045 0.744 0.744 - - - - - RIKEN cDNA 6820431F20 gene [Source:MGI Symbol;Acc:MGI:3694236]
40. Josd2 ENSMUSG00000038695 1084 0.742 0.742 - - - - - Josephin domain containing 2 [Source:MGI Symbol;Acc:MGI:1913374]
41. Sirpa ENSMUSG00000037902 940 0.741 0.741 - - - - - signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
42. Rtn4 ENSMUSG00000020458 14007 0.74 0.740 - - - - - reticulon 4 [Source:MGI Symbol;Acc:MGI:1915835]
43. Cnih2 ENSMUSG00000024873 3004 0.738 0.738 - - - - - cornichon family AMPA receptor auxiliary protein 2 [Source:MGI Symbol;Acc:MGI:1277225]
44. Ncstn ENSMUSG00000003458 2776 0.738 0.738 - - - - - nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
45. Mpzl1 ENSMUSG00000026566 11257 0.738 0.738 - - - - - myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
46. Phc3 ENSMUSG00000037652 587 0.737 0.737 - - - - - polyhomeotic 3 [Source:MGI Symbol;Acc:MGI:2181434]
47. Cul1 ENSMUSG00000029686 8892 0.736 0.736 - - - - - cullin 1 [Source:MGI Symbol;Acc:MGI:1349658]
48. Alkbh8 ENSMUSG00000025899 1212 0.735 0.735 - - - - - alkB homolog 8, tRNA methyltransferase [Source:MGI Symbol;Acc:MGI:1914917]
49. Tmem9 ENSMUSG00000026411 5389 0.735 0.735 - - - - - transmembrane protein 9 [Source:MGI Symbol;Acc:MGI:1913491]
50. Mterfd1 Mterfd1 583 0.734 0.734 - - - - -
51. Axl ENSMUSG00000002602 3758 0.732 0.732 - - - - - AXL receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:1347244]
52. Mrps10 ENSMUSG00000034729, ENSMUSG00000116070 1338 0.732 0.732 - - - - - mitochondrial ribosomal protein S10 [Source:MGI Symbol;Acc:MGI:1928139]
53. Cd47 ENSMUSG00000055447 2653 0.731 0.731 - - - - - CD47 antigen (Rh-related antigen, integrin-associated signal transducer) [Source:MGI Symbol;Acc:MGI:96617]
54. Sepn1 1707 0.729 0.729 - - - - - selenoprotein N, 1
55. Shcbp1 ENSMUSG00000022322 2301 0.729 0.729 - - - - - Shc SH2-domain binding protein 1 [Source:MGI Symbol;Acc:MGI:1338802]
56. Ddx54 ENSMUSG00000029599 3371 0.727 0.727 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
57. Pfdn1 ENSMUSG00000024346 2808 0.727 0.727 - - - - - prefoldin 1 [Source:MGI Symbol;Acc:MGI:1914449]
58. Dynll2 ENSMUSG00000020483 7870 0.726 0.726 - - - - - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
59. Elovl6 ENSMUSG00000041220 3320 0.726 0.726 - - - - - ELOVL family member 6, elongation of long chain fatty acids (yeast) [Source:MGI Symbol;Acc:MGI:2156528]
60. Cspp1 ENSMUSG00000056763 2780 0.726 0.726 - - - - - centrosome and spindle pole associated protein 1 [Source:MGI Symbol;Acc:MGI:2681832]
61. Calu ENSMUSG00000029767 4381 0.725 0.725 - - - - - calumenin [Source:MGI Symbol;Acc:MGI:1097158]
62. Thra ENSMUSG00000058756 1241 0.725 0.725 - - - - - thyroid hormone receptor alpha [Source:MGI Symbol;Acc:MGI:98742]
63. Eed ENSMUSG00000030619 1900 0.725 0.725 - - - - - embryonic ectoderm development [Source:MGI Symbol;Acc:MGI:95286]
64. Slc25a22 ENSMUSG00000019082 749 0.724 0.724 - - - - - solute carrier family 25 (mitochondrial carrier, glutamate), member 22 [Source:MGI Symbol;Acc:MGI:1915517]
65. Nrbp1 ENSMUSG00000029148 2373 0.724 0.724 - - - - - nuclear receptor binding protein 1 [Source:MGI Symbol;Acc:MGI:2183436]
66. Erc1 ENSMUSG00000030172 1841 0.724 0.724 - - - - - ELKS/RAB6-interacting/CAST family member 1 [Source:MGI Symbol;Acc:MGI:2151013]
67. Fbxo45 ENSMUSG00000035764 1458 0.723 0.723 - - - - - F-box protein 45 [Source:MGI Symbol;Acc:MGI:2447775]
68. Psmc4 ENSMUSG00000030603 4369 0.722 0.722 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:MGI Symbol;Acc:MGI:1346093]
69. Wipf2 ENSMUSG00000038013 2600 0.722 0.722 - - - - - WAS/WASL interacting protein family, member 2 [Source:MGI Symbol;Acc:MGI:1924462]
70. Rmi2 ENSMUSG00000037991 1789 0.722 0.722 - - - - - RecQ mediated genome instability 2 [Source:MGI Symbol;Acc:MGI:2685383]
71. Zdhhc3 ENSMUSG00000025786 964 0.72 0.720 - - - - - zinc finger, DHHC domain containing 3 [Source:MGI Symbol;Acc:MGI:1926134]
72. Asb6 ENSMUSG00000039483 591 0.719 0.719 - - - - - ankyrin repeat and SOCS box-containing 6 [Source:MGI Symbol;Acc:MGI:1919573]
73. Pan3 ENSMUSG00000029647 1662 0.719 0.719 - - - - - PAN3 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1919837]
74. Cep152 ENSMUSG00000068394 643 0.718 0.718 - - - - - centrosomal protein 152 [Source:MGI Symbol;Acc:MGI:2139083]
75. Shprh ENSMUSG00000090112 1191 0.718 0.718 - - - - - SNF2 histone linker PHD RING helicase [Source:MGI Symbol;Acc:MGI:1917581]
76. Vps54 ENSMUSG00000020128 980 0.718 0.718 - - - - - VPS54 GARP complex subunit [Source:MGI Symbol;Acc:MGI:2178798]
77. Gart ENSMUSG00000022962 1839 0.718 0.718 - - - - - phosphoribosylglycinamide formyltransferase [Source:MGI Symbol;Acc:MGI:95654]
78. Epn2 ENSMUSG00000001036 1070 0.717 0.717 - - - - - epsin 2 [Source:MGI Symbol;Acc:MGI:1333766]
79. Gnl1 ENSMUSG00000024429 820 0.717 0.717 - - - - - guanine nucleotide binding protein-like 1 [Source:MGI Symbol;Acc:MGI:95764]
80. Pkdcc ENSMUSG00000024247 1550 0.717 0.717 - - - - - protein kinase domain containing, cytoplasmic [Source:MGI Symbol;Acc:MGI:2147077]
81. Exoc7 ENSMUSG00000020792 1779 0.716 0.716 - - - - - exocyst complex component 7 [Source:MGI Symbol;Acc:MGI:1859270]
82. Mier2 ENSMUSG00000042570 1463 0.715 0.715 - - - - - MIER family member 2 [Source:MGI Symbol;Acc:MGI:1917677]
83. Zer1 ENSMUSG00000039686 2964 0.715 0.715 - - - - - zyg-11 related, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2442511]
84. Myo7a ENSMUSG00000030761 320 0.714 0.714 - - - - - myosin VIIA [Source:MGI Symbol;Acc:MGI:104510]
85. Adh5 ENSMUSG00000028138 5434 0.713 0.713 - - - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:MGI Symbol;Acc:MGI:87929]
86. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.713 0.713 - - - - - autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
87. Dhx8 ENSMUSG00000034931 955 0.712 0.712 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:MGI Symbol;Acc:MGI:1306823]
88. Sclt1 ENSMUSG00000059834 767 0.712 0.712 - - - - - sodium channel and clathrin linker 1 [Source:MGI Symbol;Acc:MGI:1914411]
89. Diablo ENSMUSG00000029433 1557 0.711 0.711 - - - - - diablo, IAP-binding mitochondrial protein [Source:MGI Symbol;Acc:MGI:1913843]
90. Arpc1b ENSMUSG00000029622 1181 0.71 0.710 - - - - - actin related protein 2/3 complex, subunit 1B [Source:MGI Symbol;Acc:MGI:1343142]
91. Coprs ENSMUSG00000031458 1554 0.71 0.710 - - - - - coordinator of PRMT5, differentiation stimulator [Source:MGI Symbol;Acc:MGI:1913673]
92. Def8 ENSMUSG00000001482 3776 0.71 0.710 - - - - - differentially expressed in FDCP 8 [Source:MGI Symbol;Acc:MGI:1346331]
93. Usp40 ENSMUSG00000005501 1265 0.709 0.709 - - - - - ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
94. Ppt1 ENSMUSG00000028657 1603 0.708 0.708 - - - - - palmitoyl-protein thioesterase 1 [Source:MGI Symbol;Acc:MGI:1298204]
95. Ssbp3 ENSMUSG00000061887 27611 0.708 - - 0.708 - - - single-stranded DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1919725]
96. Klhl6 ENSMUSG00000043008 952 0.708 0.708 - - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
97. Mthfd1 ENSMUSG00000021048 2041 0.708 0.708 - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase [Source:MGI Symbol;Acc:MGI:1342005]
98. Gtpbp10 ENSMUSG00000040464 1042 0.707 0.707 - - - - - GTP-binding protein 10 (putative) [Source:MGI Symbol;Acc:MGI:2385599]
99. Ankfy1 ENSMUSG00000020790 1629 0.707 0.707 - - - - - ankyrin repeat and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:1337008]
100. Dera ENSMUSG00000030225 1240 0.707 0.707 - - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA