Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chchd4

Gene Name Gene ID Reads Annotation
Chchd4 ENSMUSG00000034203 1568 coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:MGI Symbol;Acc:MGI:1919420]







Genes with expression patterns similar to Chchd4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chchd4 ENSMUSG00000034203 1568 6 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:MGI Symbol;Acc:MGI:1919420]
2. Papd5 ENSMUSG00000036779 1511 1.744 0.822 - - - - 0.922 PAP associated domain containing 5 [Source:MGI Symbol;Acc:MGI:1917820]
3. Coq3 ENSMUSG00000028247 463 1.713 0.870 - - - - 0.843 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
4. Prkaa1 ENSMUSG00000050697 591 1.682 0.831 - - - - 0.851 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
5. Ctsc ENSMUSG00000030560 650 1.658 0.844 - - - - 0.814 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
6. Atp8a1 ENSMUSG00000037685 1155 1.624 0.834 - - - - 0.790 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
7. Swt1 ENSMUSG00000052748 2836 1.586 0.745 - - - - 0.841 SWT1 RNA endoribonuclease homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914125]
8. Plxnb1 ENSMUSG00000053646 2044 1.575 0.791 - - - - 0.784 plexin B1 [Source:MGI Symbol;Acc:MGI:2154238]
9. Cst3 ENSMUSG00000027447 2497 1.501 0.769 - - - - 0.732 cystatin C [Source:MGI Symbol;Acc:MGI:102519]
10. Kifap3 ENSMUSG00000026585 2025 1.441 0.734 - - - - 0.707 kinesin-associated protein 3 [Source:MGI Symbol;Acc:MGI:107566]
11. Usp50 ENSMUSG00000027364 304 0.899 - - - - - 0.899 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
12. Dcaf13 ENSMUSG00000022300, ENSMUSG00000106903 2594 0.895 0.895 - - - - - DDB1 and CUL4 associated factor 13 [Source:MGI Symbol;Acc:MGI:2684929]
13. Commd4 ENSMUSG00000032299 2924 0.894 0.894 - - - - - COMM domain containing 4 [Source:MGI Symbol;Acc:MGI:1913449]
14. Trmt10c ENSMUSG00000044763 662 0.892 0.892 - - - - - tRNA methyltransferase 10C [Source:MGI Symbol;Acc:MGI:1196261]
15. 1500011B03Rik ENSMUSG00000072694 1128 0.891 0.891 - - - - - RIKEN cDNA 1500011B03 gene [Source:MGI Symbol;Acc:MGI:1913486]
16. Sema6d ENSMUSG00000027200 1413 0.891 - - - - - 0.891 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
17. Gpd1l ENSMUSG00000050627 467 0.889 0.889 - - - - - glycerol-3-phosphate dehydrogenase 1-like [Source:MGI Symbol;Acc:MGI:1289257]
18. Utp20 ENSMUSG00000004356 1170 0.887 0.887 - - - - - UTP20 small subunit processome component [Source:MGI Symbol;Acc:MGI:1917933]
19. Brms1 ENSMUSG00000080268 492 0.886 - - - - - 0.886 breast cancer metastasis-suppressor 1 [Source:MGI Symbol;Acc:MGI:2388804]
20. Ids ENSMUSG00000035847 777 0.885 - - - - - 0.885 iduronate 2-sulfatase [Source:MGI Symbol;Acc:MGI:96417]
21. 4932438A13Rik ENSMUSG00000037270 1496 0.884 0.884 - - - - - RIKEN cDNA 4932438A13 gene [Source:MGI Symbol;Acc:MGI:2444631]
22. Slc39a11 ENSMUSG00000041654 939 0.884 0.884 - - - - - solute carrier family 39 (metal ion transporter), member 11 [Source:MGI Symbol;Acc:MGI:1917056]
23. Gtf2f2 ENSMUSG00000067995 1487 0.884 - - - - - 0.884 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
24. Ctnnbip1 ENSMUSG00000028988 3409 0.883 0.883 - - - - - catenin beta interacting protein 1 [Source:MGI Symbol;Acc:MGI:1915756]
25. Pwp1 ENSMUSG00000001785 2614 0.883 0.883 - - - - - PWP1 homolog, endonuclein [Source:MGI Symbol;Acc:MGI:1914735]
26. Armc8 ENSMUSG00000032468 1199 0.88 0.880 - - - - - armadillo repeat containing 8 [Source:MGI Symbol;Acc:MGI:1921375]
27. Azin1 ENSMUSG00000037458 2371 0.879 0.879 - - - - - antizyme inhibitor 1 [Source:MGI Symbol;Acc:MGI:1859169]
28. Tstd3 ENSMUSG00000028251 1160 0.879 0.879 - - - - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
29. Spsb1 ENSMUSG00000039911 1526 0.878 0.878 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:MGI Symbol;Acc:MGI:1921896]
30. Ccdc12 ENSMUSG00000019659 1494 0.878 0.878 - - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
31. Tmem248 ENSMUSG00000053094 2906 0.878 0.878 - - - - - transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
32. Zfp820 ENSMUSG00000069743 854 0.878 - - - - - 0.878 zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
33. Ccbe1 ENSMUSG00000046318 722 0.878 0.878 - - - - - collagen and calcium binding EGF domains 1 [Source:MGI Symbol;Acc:MGI:2445053]
34. Rmnd5b ENSMUSG00000001054 1393 0.877 - - - - - 0.877 required for meiotic nuclear division 5 homolog B [Source:MGI Symbol;Acc:MGI:1913339]
35. Gucd1 ENSMUSG00000033416 864 0.875 - - - - - 0.875 guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
36. Rabif ENSMUSG00000042229 952 0.875 0.875 - - - - - RAB interacting factor [Source:MGI Symbol;Acc:MGI:2138605]
37. Ankrd37 ENSMUSG00000050914 254 0.875 0.875 - - - - - ankyrin repeat domain 37 [Source:MGI Symbol;Acc:MGI:3603344]
38. Zfp654 ENSMUSG00000047141 509 0.874 0.874 - - - - - zinc finger protein 654 [Source:MGI Symbol;Acc:MGI:1919270]
39. Mt2 ENSMUSG00000031762 1817 0.873 - - - - - 0.873 metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
40. BC002163 ENSMUSG00000081824 561 0.87 0.870 - - - - - cDNA sequence BC002163 [Source:MGI Symbol;Acc:MGI:3612445]
41. Sh2b2 ENSMUSG00000005057 875 0.87 0.870 - - - - - SH2B adaptor protein 2 [Source:MGI Symbol;Acc:MGI:1345171]
42. Dcaf11 ENSMUSG00000022214 663 0.87 0.870 - - - - - DDB1 and CUL4 associated factor 11 [Source:MGI Symbol;Acc:MGI:90168]
43. Gm14849 ENSMUSG00000081807 337 0.87 0.870 - - - - - predicted gene 14849 [Source:MGI Symbol;Acc:MGI:3802125]
44. Akr1b10 ENSMUSG00000061758 586 0.87 0.870 - - - - - aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
45. Bop1 ENSMUSG00000022557 5004 0.869 0.869 - - - - - block of proliferation 1 [Source:MGI Symbol;Acc:MGI:1334460]
46. Chid1 ENSMUSG00000025512 572 0.868 0.868 - - - - - chitinase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915288]
47. Lrrc14 ENSMUSG00000033728 1769 0.867 0.867 - - - - - leucine rich repeat containing 14 [Source:MGI Symbol;Acc:MGI:2445060]
48. Tm7sf3 ENSMUSG00000040234 858 0.867 0.867 - - - - - transmembrane 7 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914873]
49. Raver1 ENSMUSG00000010205 347 0.867 0.867 - - - - - ribonucleoprotein, PTB-binding 1 [Source:MGI Symbol;Acc:MGI:1919016]
50. Ccne2 ENSMUSG00000028212 419 0.866 0.866 - - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
51. Mlx ENSMUSG00000017801 376 0.865 0.865 - - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
52. Caprin2 ENSMUSG00000030309 884 0.865 0.865 - - - - - caprin family member 2 [Source:MGI Symbol;Acc:MGI:2448541]
53. Myo5a ENSMUSG00000034593 2172 0.865 0.865 - - - - - myosin VA [Source:MGI Symbol;Acc:MGI:105976]
54. Caap1 ENSMUSG00000028578 1396 0.865 0.865 - - - - - caspase activity and apoptosis inhibitor 1 [Source:MGI Symbol;Acc:MGI:1915020]
55. Herpud1 ENSMUSG00000031770 842 0.864 0.864 - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:MGI Symbol;Acc:MGI:1927406]
56. Ddx28 ENSMUSG00000045538 608 0.864 0.864 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
57. Ehd4 ENSMUSG00000027293 1585 0.862 0.862 - - - - - EH-domain containing 4 [Source:MGI Symbol;Acc:MGI:1919619]
58. Ext2 ENSMUSG00000027198 1680 0.862 0.862 - - - - - exostoses (multiple) 2 [Source:MGI Symbol;Acc:MGI:108050]
59. Acad8 ENSMUSG00000031969 724 0.861 0.861 - - - - - acyl-Coenzyme A dehydrogenase family, member 8 [Source:MGI Symbol;Acc:MGI:1914198]
60. Ptdss1 ENSMUSG00000021518 4429 0.861 - - - - - 0.861 phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
61. Srgap2 ENSMUSG00000026425 3051 0.861 0.861 - - - - - SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
62. Lrrc61 ENSMUSG00000073096 1054 0.86 0.860 - - - - - leucine rich repeat containing 61 [Source:MGI Symbol;Acc:MGI:2652848]
63. Mrpl37 ENSMUSG00000028622 2555 0.86 - - - - - 0.860 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
64. Stam ENSMUSG00000026718 2341 0.86 0.860 - - - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]
65. Meaf6 ENSMUSG00000028863 3587 0.859 0.859 - - - - - MYST/Esa1-associated factor 6 [Source:MGI Symbol;Acc:MGI:1917338]
66. Kctd6 ENSMUSG00000021752 327 0.858 0.858 - - - - - potassium channel tetramerisation domain containing 6 [Source:MGI Symbol;Acc:MGI:1918643]
67. Ppp2r2a ENSMUSG00000022052 5227 0.858 0.858 - - - - - protein phosphatase 2, regulatory subunit B, alpha [Source:MGI Symbol;Acc:MGI:1919228]
68. Mtmr9 ENSMUSG00000035078 434 0.858 0.858 - - - - - myotubularin related protein 9 [Source:MGI Symbol;Acc:MGI:2442842]
69. Slc25a11 ENSMUSG00000014606 1671 0.858 - - - - - 0.858 solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 [Source:MGI Symbol;Acc:MGI:1915113]
70. Emc4 ENSMUSG00000027131 1767 0.857 0.857 - - - - - ER membrane protein complex subunit 4 [Source:MGI Symbol;Acc:MGI:1915282]
71. Slc25a13 ENSMUSG00000015112 2038 0.856 - - - - - 0.856 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 [Source:MGI Symbol;Acc:MGI:1354721]
72. 9330159M07Rik ENSMUSG00000097177 192 0.856 0.856 - - - - - RIKEN cDNA 9330159M07 gene [Source:MGI Symbol;Acc:MGI:2442519]
73. Vmn2r55 ENSMUSG00000091045 88 0.856 0.856 - - - - - vomeronasal 2, receptor 55 [Source:MGI Symbol;Acc:MGI:3757950]
74. Shank3 ENSMUSG00000022623 139 0.855 0.855 - - - - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
75. Dhodh ENSMUSG00000031730 1335 0.855 0.855 - - - - - dihydroorotate dehydrogenase [Source:MGI Symbol;Acc:MGI:1928378]
76. Gm4149 ENSMUSG00000074800 1265 0.855 0.855 - - - - - predicted pseudogene 4149 [Source:MGI Symbol;Acc:MGI:3782325]
77. Csrnp1 ENSMUSG00000032515 372 0.855 0.855 - - - - - cysteine-serine-rich nuclear protein 1 [Source:MGI Symbol;Acc:MGI:2387989]
78. Usp16 ENSMUSG00000025616 1330 0.854 - - - - - 0.854 ubiquitin specific peptidase 16 [Source:MGI Symbol;Acc:MGI:1921362]
79. Cd34 ENSMUSG00000016494 921 0.854 0.854 - - - - - CD34 antigen [Source:MGI Symbol;Acc:MGI:88329]
80. Pggt1b ENSMUSG00000024477 511 0.854 0.854 - - - - - protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514]
81. Nrros ENSMUSG00000052384 234 0.854 0.854 - - - - - negative regulator of reactive oxygen species [Source:MGI Symbol;Acc:MGI:2445095]
82. Ero1lb ENSMUSG00000057069 171 0.854 0.854 - - - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
83. Inpp1 ENSMUSG00000026102 176 0.854 0.854 - - - - - inositol polyphosphate-1-phosphatase [Source:MGI Symbol;Acc:MGI:104848]
84. Dgat2 ENSMUSG00000030747 207 0.854 0.854 - - - - - diacylglycerol O-acyltransferase 2 [Source:MGI Symbol;Acc:MGI:1915050]
85. Fam83d ENSMUSG00000027654 1788 0.854 0.854 - - - - - family with sequence similarity 83, member D [Source:MGI Symbol;Acc:MGI:1919128]
86. Fhl3 ENSMUSG00000032643 178 0.853 0.853 - - - - - four and a half LIM domains 3 [Source:MGI Symbol;Acc:MGI:1341092]
87. Raph1 ENSMUSG00000026014 401 0.852 0.852 - - - - - Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [Source:MGI Symbol;Acc:MGI:1924550]
88. Gm26624 ENSMUSG00000097122 753 0.852 0.852 - - - - - predicted gene, 26624 [Source:MGI Symbol;Acc:MGI:5477118]
89. Cep19 ENSMUSG00000035790 440 0.851 0.851 - - - - - centrosomal protein 19 [Source:MGI Symbol;Acc:MGI:1914244]
90. Gm2a ENSMUSG00000000594 385 0.851 0.851 - - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
91. Vash2 ENSMUSG00000037568 2078 0.851 0.851 - - - - - vasohibin 2 [Source:MGI Symbol;Acc:MGI:2444826]
92. 5430435G22Rik 5430435G22Rik 68 0.851 0.851 - - - - -
93. Hes3 ENSMUSG00000028946 73 0.85 - - - - - 0.850 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
94. Phf19 ENSMUSG00000026873 83 0.85 - - - - - 0.850 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
95. Fbxl22 ENSMUSG00000050503 191 0.85 0.850 - - - - - F-box and leucine-rich repeat protein 22 [Source:MGI Symbol;Acc:MGI:1921415]
96. Cnn1 ENSMUSG00000001349 296 0.85 0.850 - - - - - calponin 1 [Source:MGI Symbol;Acc:MGI:104979]
97. Gm15823 ENSMUSG00000081143 242 0.85 0.850 - - - - - predicted gene 15823 [Source:MGI Symbol;Acc:MGI:3801858]
98. Nup153 ENSMUSG00000021374 1803 0.85 0.850 - - - - - nucleoporin 153 [Source:MGI Symbol;Acc:MGI:2385621]
99. Cenpe ENSMUSG00000045328 4221 0.85 0.850 - - - - - centromere protein E [Source:MGI Symbol;Acc:MGI:1098230]
100. Wdr73 ENSMUSG00000025722 956 0.85 0.850 - - - - - WD repeat domain 73 [Source:MGI Symbol;Acc:MGI:1919218]

There are 487 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA