Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx4

Gene Name Gene ID Reads Annotation
Cdx4 ENSMUSG00000031326 2 caudal type homeobox 4 [Source:MGI Symbol;Acc:MGI:88362]







Genes with expression patterns similar to Cdx4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx4 ENSMUSG00000031326 2 3 1.000 - - 1.000 1.000 - caudal type homeobox 4 [Source:MGI Symbol;Acc:MGI:88362]
2. Cacna1i ENSMUSG00000022416 8 2 1.000 - - 1.000 - - calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]
3. Gm13261 ENSMUSG00000086748 3 1.709 1.000 - - - 0.709 - predicted gene 13261 [Source:MGI Symbol;Acc:MGI:3650831]
4. Hist1h2ad ENSMUSG00000071478 18 1 1.000 - - - - - histone cluster 1, H2ad [Source:MGI Symbol;Acc:MGI:2448289]
5. H2-DMb1 ENSMUSG00000079547 2 1 - - - 1.000 - - histocompatibility 2, class II, locus Mb1 [Source:MGI Symbol;Acc:MGI:95922]
6. 4921524L21Rik ENSMUSG00000039540 1 1 1.000 - - - - - RIKEN cDNA 4921524L21 gene [Source:MGI Symbol;Acc:MGI:1918151]
7. Gm12816 ENSMUSG00000083011 3 1 - - - 1.000 - - predicted gene 12816 [Source:MGI Symbol;Acc:MGI:3649628]
8. 4930429F24Rik ENSMUSG00000086918 4 1 - - - - 1.000 - RIKEN cDNA 4930429F24 gene [Source:MGI Symbol;Acc:MGI:1921883]
9. Gm14465 ENSMUSG00000083691 1 1 - - - 1.000 - - predicted gene 14465 [Source:MGI Symbol;Acc:MGI:3651393]
10. Mical1 ENSMUSG00000019823 14 1 - - - 1.000 - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
11. Gm26661 ENSMUSG00000097169 0 1 1.000 - - - - - predicted gene, 26661 [Source:MGI Symbol;Acc:MGI:5477155]
12. Nr2e3 ENSMUSG00000032292 10 1 1.000 - - - - - nuclear receptor subfamily 2, group E, member 3 [Source:MGI Symbol;Acc:MGI:1346317]
13. Ptger1 ENSMUSG00000019464 5 1 - - - 1.000 - - prostaglandin E receptor 1 (subtype EP1) [Source:MGI Symbol;Acc:MGI:97793]
14. Clrn1 ENSMUSG00000043850 2 1 - - - 1.000 - - clarin 1 [Source:MGI Symbol;Acc:MGI:2388124]
15. Slc17a4 ENSMUSG00000021336 10 1 - - - 1.000 - - solute carrier family 17 (sodium phosphate), member 4 [Source:MGI Symbol;Acc:MGI:2442850]
16. Zfp572 ENSMUSG00000098528 3 1 - - - - 1.000 - zinc finger protein 572 [Source:MGI Symbol;Acc:MGI:1922170]
17. Myh13 ENSMUSG00000060180 2 1 1.000 - - - - - myosin, heavy polypeptide 13, skeletal muscle [Source:MGI Symbol;Acc:MGI:1339967]
18. Pdzd3 ENSMUSG00000032105 1 1 - - - 1.000 - - PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:2429554]
19. 1700019N19Rik ENSMUSG00000026931 2 1 - - - - 1.000 - RIKEN cDNA 1700019N19 gene [Source:MGI Symbol;Acc:MGI:1914757]
20. Gm12906 ENSMUSG00000084874 2 1 1.000 - - - - - predicted gene 12906 [Source:MGI Symbol;Acc:MGI:3650884]
21. Gm16028 ENSMUSG00000090252 4 1 1.000 - - - - - predicted gene 16028 [Source:MGI Symbol;Acc:MGI:3801982]
22. Gm7577 ENSMUSG00000098237 0 1 1.000 - - - - - predicted gene 7577 [Source:MGI Symbol;Acc:MGI:3646748]
23. Ccdc67 3 1 1.000 - - - - - coiled-coil domain containing 67, transcript variant X8
24. Tlr8 ENSMUSG00000040522 1 1 - - - 1.000 - - toll-like receptor 8 [Source:MGI Symbol;Acc:MGI:2176887]
25. E230025N22Rik ENSMUSG00000044719 0 1 1.000 - - - - - Riken cDNA E230025N22 gene [Source:MGI Symbol;Acc:MGI:3687212]
26. Gm14137 ENSMUSG00000055926 1 1 1.000 - - - - - predicted gene 14137 [Source:MGI Symbol;Acc:MGI:3651144]
27. Zcchc16 15 1 1.000 - - - - - zinc finger, CCHC domain containing 16, transcript variant X4
28. 4930522O17Rik ENSMUSG00000086947 1 1 - - - - 1.000 - RIKEN cDNA 4930522O17 gene [Source:MGI Symbol;Acc:MGI:1925430]
29. Igfals ENSMUSG00000046070 8 1 - - - - 1.000 - insulin-like growth factor binding protein, acid labile subunit [Source:MGI Symbol;Acc:MGI:107973]
30. Gm7271 ENSMUSG00000091204 11 1 1.000 - - - - - predicted gene 7271 [Source:MGI Symbol;Acc:MGI:3647743]
31. Gm14690 Gm14690 2 1 - - - 1.000 - -
32. Gm13145 Gm13145 0 1 1.000 - - - - -
33. Reps2 ENSMUSG00000040855 61 1 1.000 - - - - - RALBP1 associated Eps domain containing protein 2 [Source:MGI Symbol;Acc:MGI:2663511]
34. Nrg2 ENSMUSG00000060275 16 1 - - - 1.000 - - neuregulin 2 [Source:MGI Symbol;Acc:MGI:1098246]
35. 1700104B16Rik ENSMUSG00000049476 10 1 1.000 - - - - - RIKEN cDNA 1700104B16 gene [Source:MGI Symbol;Acc:MGI:1925886]
36. Gm17116 ENSMUSG00000090785 2 1 1.000 - - - - - predicted gene 17116 [Source:MGI Symbol;Acc:MGI:4937943]
37. Krt75 ENSMUSG00000022986 2 1 - - - - 1.000 - keratin 75 [Source:MGI Symbol;Acc:MGI:1923500]
38. Clec4e ENSMUSG00000030142 3 1 - - - 1.000 - - C-type lectin domain family 4, member e [Source:MGI Symbol;Acc:MGI:1861232]
39. Ifi203 ENSMUSG00000039997 17 1 - - - 1.000 - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
40. Vstm2a ENSMUSG00000048834 27 1 1.000 - - - - - V-set and transmembrane domain containing 2A [Source:MGI Symbol;Acc:MGI:2384826]
41. Gm24147 ENSMUSG00000064697 1 1 - - - - 1.000 - predicted gene, 24147 [Source:MGI Symbol;Acc:MGI:5453924]
42. Gm5939 ENSMUSG00000083258 7 1 - - - 1.000 - - predicted pseudogene 5939 [Source:MGI Symbol;Acc:MGI:3648845]
43. Med12 ENSMUSG00000079487 20 1 - - - - 1.000 - mediator complex subunit 12 [Source:MGI Symbol;Acc:MGI:1926212]
44. Pglyrp2 ENSMUSG00000079563 1 1 - - - - 1.000 - peptidoglycan recognition protein 2 [Source:MGI Symbol;Acc:MGI:1928099]
45. Gm9875 Gm9875 4 1 1.000 - - - - -
46. Hist1h3f ENSMUSG00000100210 20 1 1.000 - - - - - histone cluster 1, H3f [Source:MGI Symbol;Acc:MGI:2448329]
47. Gm23722 ENSMUSG00000064936 14 1 1.000 - - - - - predicted gene, 23722 [Source:MGI Symbol;Acc:MGI:5453499]
48. Gm25916 ENSMUSG00000077451 0 1 1.000 - - - - - predicted gene, 25916 [Source:MGI Symbol;Acc:MGI:5455693]
49. Gm16049 Gm16049 3 1 - - - 1.000 - -
50. Gpr26 ENSMUSG00000040125 3 1 1.000 - - - - - G protein-coupled receptor 26 [Source:MGI Symbol;Acc:MGI:2441758]
51. Gnrhr ENSMUSG00000029255 2 1 - - - - 1.000 - gonadotropin releasing hormone receptor [Source:MGI Symbol;Acc:MGI:95790]
52. Muc20 ENSMUSG00000035638 1 1 - - - - 1.000 - mucin 20 [Source:MGI Symbol;Acc:MGI:2385039]
53. Olfr885 ENSMUSG00000096424 2 1 1.000 - - - - - olfactory receptor 885 [Source:MGI Symbol;Acc:MGI:3030719]
54. Gm13453 ENSMUSG00000083240 2 1 1.000 - - - - - predicted gene 13453 [Source:MGI Symbol;Acc:MGI:3651618]
55. Zfp640 ENSMUSG00000074830 2 1 - - - - 1.000 - zinc finger protein 640 [Source:MGI Symbol;Acc:MGI:2678025]
56. Amn ENSMUSG00000021278 9 1 1.000 - - - - - amnionless [Source:MGI Symbol;Acc:MGI:1934943]
57. Gm12022 ENSMUSG00000085675 13 1 - - - 1.000 - - predicted gene 12022 [Source:MGI Symbol;Acc:MGI:3650976]
58. Angptl3 ENSMUSG00000028553 11 1 - - - - 1.000 - angiopoietin-like 3 [Source:MGI Symbol;Acc:MGI:1353627]
59. Gm7247 ENSMUSG00000068399 2 1 1.000 - - - - - predicted gene 7247 [Source:MGI Symbol;Acc:MGI:3643454]
60. 9230113P08Rik ENSMUSG00000078934 19 1 1.000 - - - - - RIKEN cDNA 9230113P08 gene [Source:MGI Symbol;Acc:MGI:1925158]
61. 4931406B18Rik ENSMUSG00000013353 2 1 - - - - 1.000 - RIKEN cDNA 4931406B18 gene [Source:MGI Symbol;Acc:MGI:1921304]
62. Gm26671 ENSMUSG00000097339 2 1 - - - 1.000 - - predicted gene, 26671 [Source:MGI Symbol;Acc:MGI:5477165]
63. Gm12279 ENSMUSG00000087120 4 1 - - - 1.000 - - predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]
64. Vmn1r17 ENSMUSG00000115644 0 1 1.000 - - - - - vomeronasal 1 receptor 17 [Source:MGI Symbol;Acc:MGI:2159452]
65. Tpbpb ENSMUSG00000062705 1 1 - - - 1.000 - - trophoblast specific protein beta [Source:MGI Symbol;Acc:MGI:2151721]
66. Snhg3 ENSMUSG00000085241 17 1 - - - 1.000 - - small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]
67. Gm24573 ENSMUSG00000093240 0 1 1.000 - - - - - predicted gene, 24573 [Source:MGI Symbol;Acc:MGI:5454350]
68. 2310069G16Rik 6 1 1.000 - - - - - RIKEN cDNA 2310069G16 gene
69. Gm5529 ENSMUSG00000067106 3 1 - - - - 1.000 - predicted pseudogene 5529 [Source:MGI Symbol;Acc:MGI:3646377]
70. BC051070 BC051070 6 1 - - - 1.000 - -
71. Gm15070 Gm15070 1 1 - - - 1.000 - -
72. Ntn5 ENSMUSG00000070564 22 1 - - - 1.000 - - netrin 5 [Source:MGI Symbol;Acc:MGI:2685330]
73. Gm14582 ENSMUSG00000086704 1 1 - - - - 1.000 - predicted gene 14582 [Source:MGI Symbol;Acc:MGI:3705178]
74. Gm22973 ENSMUSG00000065232 8 1 1.000 - - - - - predicted gene, 22973 [Source:MGI Symbol;Acc:MGI:5452750]
75. 4732414G09Rik ENSMUSG00000086943 8 1 - - - 1.000 - - RIKEN cDNA 4732414G09 gene [Source:MGI Symbol;Acc:MGI:3045381]
76. Vmn2r59 ENSMUSG00000092032 0 1 1.000 - - - - - vomeronasal 2, receptor 59 [Source:MGI Symbol;Acc:MGI:3643747]
77. Slc22a19 ENSMUSG00000024757 1 1 - - - - 1.000 - solute carrier family 22 (organic anion transporter), member 19 [Source:MGI Symbol;Acc:MGI:2442751]
78. Cnga3 ENSMUSG00000026114 7 1 1.000 - - - - - cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
79. Olfr340 ENSMUSG00000094266 2 1 - - - - 1.000 - olfactory receptor 340 [Source:MGI Symbol;Acc:MGI:3030174]
80. Syt15 ENSMUSG00000041479 4 1 1.000 - - - - - synaptotagmin XV [Source:MGI Symbol;Acc:MGI:2442166]
81. Obox5 ENSMUSG00000074366 0 1 1.000 - - - - - oocyte specific homeobox 5 [Source:MGI Symbol;Acc:MGI:2149035]
82. Gm6884 ENSMUSG00000082960 3 1 1.000 - - - - - predicted gene 6884 [Source:MGI Symbol;Acc:MGI:3646729]
83. Gm11884 ENSMUSG00000087098 0 1 1.000 - - - - - predicted gene 11884 [Source:MGI Symbol;Acc:MGI:3651157]
84. Gm15625 ENSMUSG00000082744 1 1 - - - 1.000 - - predicted gene 15625 [Source:MGI Symbol;Acc:MGI:3783069]
85. Cilp2 ENSMUSG00000044006 19 1 1.000 - - - - - cartilage intermediate layer protein 2 [Source:MGI Symbol;Acc:MGI:1915959]
86. 1700003E16Rik ENSMUSG00000030030 2 1 1.000 - - - - - RIKEN cDNA 1700003E16 gene [Source:MGI Symbol;Acc:MGI:1919087]
87. Tmem72 ENSMUSG00000048108 3 1 - - - - 1.000 - transmembrane protein 72 [Source:MGI Symbol;Acc:MGI:2442707]
88. 0610039K10Rik ENSMUSG00000058812 0 1 1.000 - - - - - RIKEN cDNA 0610039K10 gene [Source:MGI Symbol;Acc:MGI:1915636]
89. A830036E02Rik ENSMUSG00000084890 3 1 - - - - 1.000 - RIKEN cDNA A830036E02 gene [Source:MGI Symbol;Acc:MGI:3686876]
90. Rnase1 ENSMUSG00000035896 6 1 1.000 - - - - - ribonuclease, RNase A family, 1 (pancreatic) [Source:MGI Symbol;Acc:MGI:97919]
91. Gm14689 Gm14689 1 1 - - - - 1.000 -
92. Trim14 ENSMUSG00000039853 4 1 - - - - 1.000 - tripartite motif-containing 14 [Source:MGI Symbol;Acc:MGI:1921985]
93. Gm13126 ENSMUSG00000082418 2 1 1.000 - - - - - predicted gene 13126 [Source:MGI Symbol;Acc:MGI:3651475]
94. Acsm2 ENSMUSG00000030945 31 1 - - - 1.000 - - acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
95. Tmem181b-ps ENSMUSG00000096780 8 1 - - - 1.000 - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
96. Gm12703 ENSMUSG00000052767 2 1 - - - 1.000 - - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
97. Gm25544 ENSMUSG00000084625 2 1 - - - - 1.000 - predicted gene, 25544 [Source:MGI Symbol;Acc:MGI:5455321]
98. Gm12322 ENSMUSG00000084139 9 1 - - - - 1.000 - predicted gene 12322 [Source:MGI Symbol;Acc:MGI:3651558]
99. Gm12514 ENSMUSG00000087614 1 1 - - - - 1.000 - predicted gene 12514 [Source:MGI Symbol;Acc:MGI:3651364]
100. Mir3098 ENSMUSG00000093157 3 1 - - - 1.000 - - microRNA 3098 [Source:MGI Symbol;Acc:MGI:4834313]

There are 120 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA