Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cdx2

Gene Name Gene ID Reads Annotation
Cdx2 ENSMUSG00000029646 39 caudal type homeobox 2 [Source:MGI Symbol;Acc:MGI:88361]







Genes with expression patterns similar to Cdx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx2 ENSMUSG00000029646 39 5 - 1.000 1.000 1.000 1.000 1.000 caudal type homeobox 2 [Source:MGI Symbol;Acc:MGI:88361]
2. Ffar4 ENSMUSG00000054200 29 3.135 - - 0.802 0.721 0.899 0.713 free fatty acid receptor 4 [Source:MGI Symbol;Acc:MGI:2147577]
3. Tspan8 ENSMUSG00000034127 107 2.488 - - 0.879 0.739 0.870 - tetraspanin 8 [Source:MGI Symbol;Acc:MGI:2384918]
4. Akr1c19 ENSMUSG00000071551 132 2.485 - 0.836 0.830 - 0.819 - aldo-keto reductase family 1, member C19 [Source:MGI Symbol;Acc:MGI:2653678]
5. Nkx6-2 ENSMUSG00000041309 47 1.738 - - 0.797 0.941 - - NK6 homeobox 2 [Source:MGI Symbol;Acc:MGI:1352738]
6. Mboat4 ENSMUSG00000071113 9 1.712 - 0.712 - 1.000 - - membrane bound O-acyltransferase domain containing 4 [Source:MGI Symbol;Acc:MGI:2685017]
7. Gpr50 ENSMUSG00000056380 58 1.58 - 0.809 - - - 0.771 G-protein-coupled receptor 50 [Source:MGI Symbol;Acc:MGI:1333877]
8. Gcg ENSMUSG00000000394 648 1.557 - 0.774 - - 0.783 - glucagon [Source:MGI Symbol;Acc:MGI:95674]
9. 1700018A04Rik ENSMUSG00000038408 32 1.511 - 0.720 - 0.791 - - RIKEN cDNA 1700018A04 gene [Source:MGI Symbol;Acc:MGI:1916631]
10. Rbp4 ENSMUSG00000024990 1171 1.46 - 0.700 0.760 - - - retinol binding protein 4, plasma [Source:MGI Symbol;Acc:MGI:97879]
11. AI661453 ENSMUSG00000034382 33 1 - - - 1.000 - - expressed sequence AI661453 [Source:MGI Symbol;Acc:MGI:2146908]
12. Gm12021 ENSMUSG00000082852 1 1 - - - 1.000 - - predicted gene 12021 [Source:MGI Symbol;Acc:MGI:3650979]
13. Pus3 ENSMUSG00000032103 9 1 - - - 1.000 - - pseudouridine synthase 3 [Source:MGI Symbol;Acc:MGI:1914299]
14. Gm22739 ENSMUSG00000065371 2 1 - - - 1.000 - - predicted gene, 22739 [Source:MGI Symbol;Acc:MGI:5452516]
15. Igsf9b ENSMUSG00000034275 3 1 - - - 1.000 - - immunoglobulin superfamily, member 9B [Source:MGI Symbol;Acc:MGI:2685354]
16. Sprr1a ENSMUSG00000050359 1 1 - - - 1.000 - - small proline-rich protein 1A [Source:MGI Symbol;Acc:MGI:106660]
17. Rasgrf1 ENSMUSG00000032356 7 1 - - - 1.000 - - RAS protein-specific guanine nucleotide-releasing factor 1 [Source:MGI Symbol;Acc:MGI:99694]
18. Gja10 ENSMUSG00000051056 2 1 - - - 1.000 - - gap junction protein, alpha 10 [Source:MGI Symbol;Acc:MGI:1339969]
19. Gm22884 ENSMUSG00000065061 1 1 - - - 1.000 - - predicted gene, 22884 [Source:MGI Symbol;Acc:MGI:5452661]
20. Saa4 ENSMUSG00000040017 48 1 - - - 1.000 - - serum amyloid A 4 [Source:MGI Symbol;Acc:MGI:98224]
21. Tcf24 ENSMUSG00000099032 2 1 - - - 1.000 - - transcription factor 24 [Source:MGI Symbol;Acc:MGI:3780500]
22. Gm14399 ENSMUSG00000090093 7 1 - - - 1.000 - - predicted gene 14399 [Source:MGI Symbol;Acc:MGI:3650082]
23. Gm14845 ENSMUSG00000082729 3 1 - - - 1.000 - - predicted gene 14845 [Source:MGI Symbol;Acc:MGI:3704515]
24. 1700092K14Rik ENSMUSG00000078600 1 1 - - - 1.000 - - RIKEN cDNA 1700092K14 gene [Source:MGI Symbol;Acc:MGI:1920786]
25. Bnipl ENSMUSG00000028115 2 1 - - - 1.000 - - BCL2/adenovirus E1B 19kD interacting protein like [Source:MGI Symbol;Acc:MGI:2384749]
26. Trbv1 ENSMUSG00000076461 1 1 - - - 1.000 - - T cell receptor beta, variable 1 [Source:MGI Symbol;Acc:MGI:98594]
27. Gm1965 ENSMUSG00000090254 4 1 - - - 1.000 - - predicted gene 1965 [Source:MGI Symbol;Acc:MGI:3584270]
28. Gm27033 ENSMUSG00000098053 9 1 - - - 1.000 - - predicted gene, 27033 [Source:MGI Symbol;Acc:MGI:5504148]
29. Hal ENSMUSG00000020017 11 1 - - - 1.000 - - histidine ammonia lyase [Source:MGI Symbol;Acc:MGI:96010]
30. Gm9894 ENSMUSG00000052909 1 1 - - - 1.000 - - predicted gene 9894 [Source:MGI Symbol;Acc:MGI:3642213]
31. Icosl ENSMUSG00000000732 44 1 - - - 1.000 - - icos ligand [Source:MGI Symbol;Acc:MGI:1354701]
32. Gm14607 ENSMUSG00000082887 1 1 - - - 1.000 - - predicted gene 14607 [Source:MGI Symbol;Acc:MGI:3710229]
33. Ms4a8a ENSMUSG00000024730 1 1 - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 8A [Source:MGI Symbol;Acc:MGI:1927657]
34. Cpa3 ENSMUSG00000001865 4 1 - - - 1.000 - - carboxypeptidase A3, mast cell [Source:MGI Symbol;Acc:MGI:88479]
35. Gm12353 ENSMUSG00000078772 2 1 - - - 1.000 - - predicted gene 12353 [Source:MGI Symbol;Acc:MGI:3699710]
36. Gm14157 Gm14157 3 1 - - - 1.000 - -
37. Gm15001 ENSMUSG00000083053 1 1 - - - 1.000 - - predicted gene 15001 [Source:MGI Symbol;Acc:MGI:3705407]
38. Gm6878 ENSMUSG00000075549 3 1 - - - 1.000 - - predicted gene 6878 [Source:MGI Symbol;Acc:MGI:3644701]
39. Gm8946 Gm8946 4 1 - - - 1.000 - -
40. Gm15735 2 1 - - - 1.000 - - predicted gene 15735, transcript variant X1
41. Gpr39 ENSMUSG00000026343 13 1 - - - 1.000 - - G protein-coupled receptor 39 [Source:MGI Symbol;Acc:MGI:1918361]
42. Abca6 ENSMUSG00000044749 7 1 - - - 1.000 - - ATP-binding cassette, sub-family A (ABC1), member 6 [Source:MGI Symbol;Acc:MGI:1923434]
43. Gm25051 ENSMUSG00000089227 1 1 - - - 1.000 - - predicted gene, 25051 [Source:MGI Symbol;Acc:MGI:5454828]
44. Acat3 ENSMUSG00000062480 1 1 - - - 1.000 - - acetyl-Coenzyme A acetyltransferase 3 [Source:MGI Symbol;Acc:MGI:109182]
45. Gm26891 ENSMUSG00000097455 8 1 - - - 1.000 - - predicted gene, 26891 [Source:MGI Symbol;Acc:MGI:5477385]
46. Trim66 ENSMUSG00000031026 3 1 - - - 1.000 - - tripartite motif-containing 66 [Source:MGI Symbol;Acc:MGI:2152406]
47. Kcne2 ENSMUSG00000039672 3 1 - - - 1.000 - - potassium voltage-gated channel, Isk-related subfamily, gene 2 [Source:MGI Symbol;Acc:MGI:1891123]
48. Serpina7 ENSMUSG00000031271 4 1 - - - 1.000 - - serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 [Source:MGI Symbol;Acc:MGI:3041197]
49. Gm8902 ENSMUSG00000092464 6 1 - - - 1.000 - - predicted gene 8902 [Source:MGI Symbol;Acc:MGI:3646241]
50. Proc ENSMUSG00000024386 3 1 - - - 1.000 - - protein C [Source:MGI Symbol;Acc:MGI:97771]
51. Gm4764 ENSMUSG00000085107 1 1 - - - 1.000 - - predicted pseudogene 4764 [Source:MGI Symbol;Acc:MGI:3648336]
52. Gm7860 ENSMUSG00000082535 15 1 - - - 1.000 - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
53. Tssk3 ENSMUSG00000000411 3 1 - - - 1.000 - - testis-specific serine kinase 3 [Source:MGI Symbol;Acc:MGI:1929914]
54. Sirpb1c ENSMUSG00000074677, ENSMUSG00000106923 6 1 - - - 1.000 - - signal-regulatory protein beta 1C [Source:MGI Symbol;Acc:MGI:3807521]
55. 5430416O09Rik 2 1 - - - 1.000 - - RIKEN cDNA 5430416O09 gene
56. Gm13648 ENSMUSG00000086549 21 1 - - - 1.000 - - predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
57. BC024582 BC024582 2 1 - - - 1.000 - -
58. Kiss1r ENSMUSG00000035773 7 1 - - - 1.000 - - KISS1 receptor [Source:MGI Symbol;Acc:MGI:2148793]
59. Fbxw18 ENSMUSG00000074059 1 1 - - - 1.000 - - F-box and WD-40 domain protein 18 [Source:MGI Symbol;Acc:MGI:3505704]
60. Izumo1 ENSMUSG00000064158 11 1 - - - 1.000 - - izumo sperm-egg fusion 1 [Source:MGI Symbol;Acc:MGI:1920706]
61. 2410133F24Rik 2410133F24Rik 6 1 - - - 1.000 - -
62. Gm15688 ENSMUSG00000089737 18 1 - - - 1.000 - - predicted gene 15688 [Source:MGI Symbol;Acc:MGI:3647549]
63. Gm14019 ENSMUSG00000086913 9 0.956 - - - 0.956 - - predicted gene 14019 [Source:MGI Symbol;Acc:MGI:3651448]
64. Gm10654 ENSMUSG00000074252 54 0.935 - - - - - 0.935 predicted gene 10654 [Source:MGI Symbol;Acc:MGI:3643366]
65. Ihh ENSMUSG00000006538 57 0.929 - - - - 0.929 - Indian hedgehog [Source:MGI Symbol;Acc:MGI:96533]
66. Foxa1 ENSMUSG00000035451 548 0.925 - - 0.925 - - - forkhead box A1 [Source:MGI Symbol;Acc:MGI:1347472]
67. Kcng1 ENSMUSG00000074575 81 0.92 - - - - - 0.920 potassium voltage-gated channel, subfamily G, member 1 [Source:MGI Symbol;Acc:MGI:3616086]
68. Slc22a22 ENSMUSG00000022366 3 0.916 - - - 0.916 - - solute carrier family 22 (organic cation transporter), member 22 [Source:MGI Symbol;Acc:MGI:2446114]
69. Nxf2 ENSMUSG00000009941 11 0.915 - - - 0.915 - - nuclear RNA export factor 2 [Source:MGI Symbol;Acc:MGI:1933192]
70. F2rl1 ENSMUSG00000021678 14 0.908 - - - 0.908 - - coagulation factor II (thrombin) receptor-like 1 [Source:MGI Symbol;Acc:MGI:101910]
71. Prr15l ENSMUSG00000047040 24 0.908 - - - 0.908 - - proline rich 15-like [Source:MGI Symbol;Acc:MGI:2387599]
72. Krt79 ENSMUSG00000061397 7 0.906 - - - - - 0.906 keratin 79 [Source:MGI Symbol;Acc:MGI:2385030]
73. Gm15324 ENSMUSG00000086057 3 0.906 - - - - - 0.906 predicted gene 15324 [Source:MGI Symbol;Acc:MGI:3705211]
74. Gm5464 ENSMUSG00000075553 14 0.906 - - - - - 0.906 predicted gene 5464 [Source:MGI Symbol;Acc:MGI:3643060]
75. Gm4755 ENSMUSG00000096940 3 0.906 - - - - - 0.906 predicted gene 4755 [Source:MGI Symbol;Acc:MGI:3779434]
76. Gm23447 ENSMUSG00000064732 3 0.906 - - - - - 0.906 predicted gene, 23447 [Source:MGI Symbol;Acc:MGI:5453224]
77. 2900041M22Rik ENSMUSG00000054418 6 0.906 - - - - - 0.906 RIKEN cDNA 2900041M22 gene [Source:MGI Symbol;Acc:MGI:1925653]
78. Efhb ENSMUSG00000023931 7 0.906 - - - - - 0.906 EF hand domain family, member B [Source:MGI Symbol;Acc:MGI:3045296]
79. Lgals2 ENSMUSG00000043501 95 0.906 - - 0.906 - - - lectin, galactose-binding, soluble 2 [Source:MGI Symbol;Acc:MGI:895068]
80. Gm20467 ENSMUSG00000092250 33 0.904 - - - - - 0.904 predicted gene 20467 [Source:MGI Symbol;Acc:MGI:5141932]
81. Afp ENSMUSG00000054932 3253 0.9 - - - - - 0.900 alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
82. Hkdc1 ENSMUSG00000020080 23 0.899 - - - - 0.899 - hexokinase domain containing 1 [Source:MGI Symbol;Acc:MGI:2384910]
83. C2 ENSMUSG00000024371 20 0.899 - - - - - 0.899 complement component 2 (within H-2S) [Source:MGI Symbol;Acc:MGI:88226]
84. Ovol2 ENSMUSG00000037279 30 0.897 - - - 0.897 - - ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:1338039]
85. Klk10 ENSMUSG00000030693 12 0.888 - - - - - 0.888 kallikrein related-peptidase 10 [Source:MGI Symbol;Acc:MGI:1916790]
86. Slc22a18 ENSMUSG00000000154 19 0.888 - - - 0.888 - - solute carrier family 22 (organic cation transporter), member 18 [Source:MGI Symbol;Acc:MGI:1336884]
87. Kcnj5 ENSMUSG00000032034 17 0.887 - - - - - 0.887 potassium inwardly-rectifying channel, subfamily J, member 5 [Source:MGI Symbol;Acc:MGI:104755]
88. A830009L08Rik ENSMUSG00000097182 12 0.886 - - - - - 0.886 RIKEN cDNA A830009L08 gene [Source:MGI Symbol;Acc:MGI:2443762]
89. Calr3 ENSMUSG00000019732 16 0.883 - - - - - 0.883 calreticulin 3 [Source:MGI Symbol;Acc:MGI:1920566]
90. Dmkn ENSMUSG00000060962 5 0.882 - - - - - 0.882 dermokine [Source:MGI Symbol;Acc:MGI:1920962]
91. Hcn4 ENSMUSG00000032338 147 0.882 - - - - - 0.882 hyperpolarization-activated, cyclic nucleotide-gated K+ 4 [Source:MGI Symbol;Acc:MGI:1298209]
92. Eno4 ENSMUSG00000048029 34 0.88 - - - - - 0.880 enolase 4 [Source:MGI Symbol;Acc:MGI:2441717]
93. Ush2a ENSMUSG00000026609 4 0.88 - - - - - 0.880 usherin [Source:MGI Symbol;Acc:MGI:1341292]
94. Tlr4 ENSMUSG00000039005 28 0.879 - - - - - 0.879 toll-like receptor 4 [Source:MGI Symbol;Acc:MGI:96824]
95. Gm13827 ENSMUSG00000086167 9 0.877 - - - - - 0.877 predicted gene 13827 [Source:MGI Symbol;Acc:MGI:3651518]
96. 4731419I09Rik ENSMUSG00000097004 89 0.875 - - - - - 0.875 RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
97. Icam4 ENSMUSG00000001014 9 0.875 - - - 0.875 - - intercellular adhesion molecule 4, Landsteiner-Wiener blood group [Source:MGI Symbol;Acc:MGI:1925619]
98. 9330020H09Rik ENSMUSG00000091050 26 0.873 - - - - - 0.873 RIKEN cDNA 9330020H09 gene [Source:MGI Symbol;Acc:MGI:3704457]
99. Foxj1 ENSMUSG00000034227 14 0.867 - - - 0.867 - - forkhead box J1 [Source:MGI Symbol;Acc:MGI:1347474]
100. Zfp345 ENSMUSG00000074731 25 0.864 - - - - - 0.864 zinc finger protein 345 [Source:MGI Symbol;Acc:MGI:3652219]

There are 195 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA