Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx1

Gene Name Gene ID Reads Annotation
Cdx1 ENSMUSG00000024619 3 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]







Genes with expression patterns similar to Cdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx1 ENSMUSG00000024619 3 4 1.000 1.000 1.000 - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
2. Gm26792 ENSMUSG00000096996 3 2 - 1.000 - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
3. 4632411P08Rik ENSMUSG00000097561 13 1.774 0.774 - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
4. Fam187b ENSMUSG00000046826 18 1.56 0.703 - - - - 0.857 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
5. Gm15421 ENSMUSG00000084235 10 1.548 - 0.813 - - - 0.735 predicted gene 15421 [Source:MGI Symbol;Acc:MGI:3705475]
6. Prss39 ENSMUSG00000026125 1 1 - 1.000 - - - - protease, serine 39 [Source:MGI Symbol;Acc:MGI:1270856]
7. Prss16 ENSMUSG00000006179 6 1 - - - - - 1.000 protease, serine 16 (thymus) [Source:MGI Symbol;Acc:MGI:1859181]
8. Gm10737 Gm10737 2 1 1.000 - - - - -
9. Gm14243 ENSMUSG00000067745 1 1 - 1.000 - - - - predicted gene 14243 [Source:MGI Symbol;Acc:MGI:3651252]
10. 1810063I02Rik ENSMUSG00000085551 4 1 - - - - - 1.000 RIKEN cDNA 1810063I02 gene [Source:MGI Symbol;Acc:MGI:1917104]
11. Gm26811 ENSMUSG00000097816 0 1 - - - - - 1.000 predicted gene, 26811 [Source:MGI Symbol;Acc:MGI:5477305]
12. Gm7584 ENSMUSG00000093537 3 1 - 1.000 - - - - predicted gene 7584 [Source:MGI Symbol;Acc:MGI:3647027]
13. Gm9 ENSMUSG00000073243 2 1 - - - - - 1.000 predicted gene 9 [Source:MGI Symbol;Acc:MGI:2684855]
14. Zfp78 ENSMUSG00000055150 2 1 1.000 - - - - - zinc finger protein 78 [Source:MGI Symbol;Acc:MGI:107783]
15. Agtr1b ENSMUSG00000054988 3 1 - 1.000 - - - - angiotensin II receptor, type 1b [Source:MGI Symbol;Acc:MGI:87965]
16. 1110002L01Rik ENSMUSG00000071456 4 1 - 1.000 - - - - RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
17. Cldn26 Cldn26 7 1 1.000 - - - - -
18. BC089491 6 1 1.000 - - - - - cDNA sequence BC089491
19. Gm12503 ENSMUSG00000087326 4 1 - - - - - 1.000 predicted gene 12503 [Source:MGI Symbol;Acc:MGI:3651570]
20. Gm14714 ENSMUSG00000081697 18 1 - 1.000 - - - - predicted gene 14714 [Source:MGI Symbol;Acc:MGI:3705345]
21. P2ry13 ENSMUSG00000036362 46 1 1.000 - - - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
22. Prps1l1 ENSMUSG00000092305 2 1 - - - - - 1.000 phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:MGI Symbol;Acc:MGI:1922706]
23. Rps19-ps4 ENSMUSG00000096699 3 1 - - - - - 1.000 ribosomal protein S19, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3645935]
24. Gm15794 ENSMUSG00000084108 0 1 - - - - - 1.000 predicted gene 15794 [Source:MGI Symbol;Acc:MGI:3783236]
25. Gm14310 Gm14310 1 1 1.000 - - - - -
26. Ifi27l2a ENSMUSG00000079017 5 1 1.000 - - - - - interferon, alpha-inducible protein 27 like 2A [Source:MGI Symbol;Acc:MGI:1924183]
27. Gm12204 ENSMUSG00000086493 2 1 1.000 - - - - - predicted gene 12204 [Source:MGI Symbol;Acc:MGI:3650262]
28. Il24 ENSMUSG00000026420 1 1 1.000 - - - - - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
29. Cabyr ENSMUSG00000024430 7 1 1.000 - - - - - calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) [Source:MGI Symbol;Acc:MGI:1918382]
30. 5530401N12Rik 5530401N12Rik 5 1 - - - - - 1.000
31. Smco2 ENSMUSG00000030292 1 1 1.000 - - - - - single-pass membrane protein with coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916621]
32. Cep85l ENSMUSG00000038594 51 1 - - - - - 1.000 centrosomal protein 85-like [Source:MGI Symbol;Acc:MGI:3642684]
33. Gm26786 ENSMUSG00000097026 5 1 1.000 - - - - - predicted gene, 26786 [Source:MGI Symbol;Acc:MGI:5477280]
34. Rps12-ps17 ENSMUSG00000095137 1 1 - - - - - 1.000 ribosomal protein S12, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3643968]
35. 4933427G17Rik 2 1 - - - - - 1.000 RIKEN cDNA 4933427G17 gene, transcript variant X2
36. 1700064E03Rik 1700064E03Rik 8 1 - - - - - 1.000
37. Gm23119 ENSMUSG00000089235 6 1 - 1.000 - - - - predicted gene, 23119 [Source:MGI Symbol;Acc:MGI:5452896]
38. C1qtnf9 ENSMUSG00000071347 6 1 1.000 - - - - - C1q and tumor necrosis factor related protein 9 [Source:MGI Symbol;Acc:MGI:3045252]
39. Uox ENSMUSG00000028186 1 1 1.000 - - - - - urate oxidase [Source:MGI Symbol;Acc:MGI:98907]
40. Slc15a1 ENSMUSG00000025557 5 1 - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
41. 4930591A17Rik ENSMUSG00000039138 1 1 - - - - - 1.000 RIKEN cDNA 4930591A17 gene [Source:MGI Symbol;Acc:MGI:1915425]
42. 1700028E10Rik ENSMUSG00000097321 1 1 - - - - - 1.000 RIKEN cDNA 1700028E10 gene [Source:MGI Symbol;Acc:MGI:1916713]
43. Gm17137 ENSMUSG00000090559 1 1 1.000 - - - - - predicted gene 17137 [Source:MGI Symbol;Acc:MGI:4937964]
44. Crct1 ENSMUSG00000027913 9 1 1.000 - - - - - cysteine-rich C-terminal 1 [Source:MGI Symbol;Acc:MGI:1921425]
45. 4933406C10Rik ENSMUSG00000097494 9 1 1.000 - - - - - RIKEN cDNA 4933406C10 gene [Source:MGI Symbol;Acc:MGI:1921326]
46. Gja6 ENSMUSG00000055691 36 1 1.000 - - - - - gap junction protein, alpha 6 [Source:MGI Symbol;Acc:MGI:95717]
47. Scarna8 ENSMUSG00000088958 1 1 - - - - - 1.000 small Cajal body-specific RNA 8 [Source:MGI Symbol;Acc:MGI:3819488]
48. Gm6526 ENSMUSG00000091698 1 1 - - - - - 1.000 predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
49. Gm16047 Gm16047 5 1 - - - - - 1.000
50. Gm15587 ENSMUSG00000086769 0 1 - - - - - 1.000 predicted gene 15587 [Source:MGI Symbol;Acc:MGI:3783035]
51. Defb25 ENSMUSG00000074678 5 1 1.000 - - - - - defensin beta 25 [Source:MGI Symbol;Acc:MGI:3651158]
52. Gm11221 ENSMUSG00000082998 16 1 - - - - - 1.000 predicted gene 11221 [Source:MGI Symbol;Acc:MGI:3651633]
53. Gm13782 ENSMUSG00000086542 0 1 - - - - - 1.000 predicted gene 13782 [Source:MGI Symbol;Acc:MGI:3649363]
54. Iqcg ENSMUSG00000035578 15 1 - - - - - 1.000 IQ motif containing G [Source:MGI Symbol;Acc:MGI:1916957]
55. Tex11 ENSMUSG00000009670 2 1 - - - - - 1.000 testis expressed gene 11 [Source:MGI Symbol;Acc:MGI:1933237]
56. Gm17597 ENSMUSG00000097613 0 1 - - - - - 1.000 predicted gene, 17597 [Source:MGI Symbol;Acc:MGI:4937231]
57. Gm14379 ENSMUSG00000087252 1 1 - - - - - 1.000 predicted gene 14379 [Source:MGI Symbol;Acc:MGI:3649346]
58. Aph1c ENSMUSG00000053040 15 1 1.000 - - - - - aph1 homolog C, gamma secretase subunit [Source:MGI Symbol;Acc:MGI:1915568]
59. Dusp15 ENSMUSG00000042662 21 1 1.000 - - - - - dual specificity phosphatase-like 15 [Source:MGI Symbol;Acc:MGI:1934928]
60. 4930594C11Rik ENSMUSG00000103948 5 1 1.000 - - - - - RIKEN cDNA 4930594C11 gene [Source:MGI Symbol;Acc:MGI:1924883]
61. Gm26783 ENSMUSG00000097435 1 1 1.000 - - - - - predicted gene, 26783 [Source:MGI Symbol;Acc:MGI:5477277]
62. Gm21464 Gm21464 1 1 1.000 - - - - -
63. Gm20539 ENSMUSG00000092353 1 1 1.000 - - - - - predicted gene 20539 [Source:MGI Symbol;Acc:MGI:5142004]
64. Ttc21a ENSMUSG00000032514 1 1 - - - - - 1.000 tetratricopeptide repeat domain 21A [Source:MGI Symbol;Acc:MGI:1921302]
65. Hr ENSMUSG00000022096 11 1 - - - - - 1.000 hairless [Source:MGI Symbol;Acc:MGI:96223]
66. AA792892 ENSMUSG00000073497 6 1 - - - - - 1.000 expressed sequence AA792892 [Source:MGI Symbol;Acc:MGI:2140789]
67. Gm5446 ENSMUSG00000050243 19 1 - - - - - 1.000 predicted gene 5446 [Source:MGI Symbol;Acc:MGI:3644854]
68. Tac4 ENSMUSG00000020872 1 1 - 1.000 - - - - tachykinin 4 [Source:MGI Symbol;Acc:MGI:1931130]
69. Tchhl1 ENSMUSG00000027908 1 1 1.000 - - - - - trichohyalin-like 1 [Source:MGI Symbol;Acc:MGI:1918575]
70. Trpc7 ENSMUSG00000021541 3 1 - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 7 [Source:MGI Symbol;Acc:MGI:1349470]
71. Cpvl ENSMUSG00000052955 2 1 - 1.000 - - - - carboxypeptidase, vitellogenic-like [Source:MGI Symbol;Acc:MGI:1918537]
72. Gm26384 ENSMUSG00000076137 3 1 - - - - - 1.000 predicted gene, 26384 [Source:MGI Symbol;Acc:MGI:5456161]
73. Prss32 ENSMUSG00000048992 1 1 - 1.000 - - - - protease, serine 32 [Source:MGI Symbol;Acc:MGI:1917064]
74. Muc6 ENSMUSG00000048191 6 1 - - - - - 1.000 mucin 6, gastric [Source:MGI Symbol;Acc:MGI:2663233]
75. Thy1 ENSMUSG00000032011 37 1 1.000 - - - - - thymus cell antigen 1, theta [Source:MGI Symbol;Acc:MGI:98747]
76. Tuba3a ENSMUSG00000067702 2 1 - 1.000 - - - - tubulin, alpha 3A [Source:MGI Symbol;Acc:MGI:1095406]
77. Itih4 ENSMUSG00000021922 7 1 - - - - - 1.000 inter alpha-trypsin inhibitor, heavy chain 4 [Source:MGI Symbol;Acc:MGI:109536]
78. Gm14927 ENSMUSG00000081546 1 1 1.000 - - - - - predicted gene 14927 [Source:MGI Symbol;Acc:MGI:3708103]
79. 4930519D14Rik ENSMUSG00000086263 2 1 - - - - - 1.000 RIKEN cDNA 4930519D14 gene [Source:MGI Symbol;Acc:MGI:1922340]
80. Gm20036 ENSMUSG00000093579 0 1 - - - - - 1.000 predicted gene, 20036 [Source:MGI Symbol;Acc:MGI:5012221]
81. Prss56 ENSMUSG00000036480 4 1 - 1.000 - - - - protease, serine 56 [Source:MGI Symbol;Acc:MGI:1916703]
82. Cst8 ENSMUSG00000027442 4 1 - - - - - 1.000 cystatin 8 (cystatin-related epididymal spermatogenic) [Source:MGI Symbol;Acc:MGI:107161]
83. Gm11411 ENSMUSG00000083385 12 1 - - - - - 1.000 predicted gene 11411 [Source:MGI Symbol;Acc:MGI:3650904]
84. Scarna2 ENSMUSG00000088185 6 1 1.000 - - - - - small Cajal body-specific RNA 2 [Source:MGI Symbol;Acc:MGI:3819484]
85. 1600014K23Rik 1600014K23Rik 0 1 - - - - - 1.000
86. 4930444M15Rik ENSMUSG00000097172 7 1 1.000 - - - - - RIKEN cDNA 4930444M15 gene [Source:MGI Symbol;Acc:MGI:1923039]
87. Gm13634 Gm13634 10 1 - 1.000 - - - -
88. Gm17566 Gm17566 24 1 - 1.000 - - - -
89. Erich2 ENSMUSG00000075302 10 1 - 1.000 - - - - glutamate rich 2 [Source:MGI Symbol;Acc:MGI:1913998]
90. Rln1 ENSMUSG00000039097 15 1 - 1.000 - - - - relaxin 1 [Source:MGI Symbol;Acc:MGI:97931]
91. Gm26805 ENSMUSG00000097268 14 1 - 1.000 - - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
92. Nobox ENSMUSG00000029736 1 1 - - - - - 1.000 NOBOX oogenesis homeobox [Source:MGI Symbol;Acc:MGI:108011]
93. Gsto2 ENSMUSG00000025069 15 1 1.000 - - - - - glutathione S-transferase omega 2 [Source:MGI Symbol;Acc:MGI:1915464]
94. Gm9376 ENSMUSG00000092109 8 1 - 1.000 - - - - predicted gene 9376 [Source:MGI Symbol;Acc:MGI:3643023]
95. B4galnt2 ENSMUSG00000013418 1 1 1.000 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
96. Apol6 ENSMUSG00000033576 1 1 - - - - - 1.000 apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
97. Gm12090 ENSMUSG00000081575 4 1 - - - - - 1.000 predicted gene 12090 [Source:MGI Symbol;Acc:MGI:3650090]
98. Emx1 ENSMUSG00000033726 16 1 1.000 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
99. Gm17705 ENSMUSG00000090936 11 1 - 1.000 - - - - predicted gene, 17705 [Source:MGI Symbol;Acc:MGI:4937339]
100. Apol7c ENSMUSG00000044309 0 1 - - - - - 1.000 apolipoprotein L 7c [Source:MGI Symbol;Acc:MGI:1920912]

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA