Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx1

Gene Name Gene ID Reads Annotation
Cdx1 ENSMUSG00000024619 3 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]







Genes with expression patterns similar to Cdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx1 ENSMUSG00000024619 3 4 1.000 1.000 1.000 - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
2. Gm26792 ENSMUSG00000096996 3 2 - 1.000 - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
3. 4632411P08Rik ENSMUSG00000097561 13 1.774 0.774 - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
4. Fam187b ENSMUSG00000046826 18 1.56 0.703 - - - - 0.857 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
5. Gm15421 ENSMUSG00000084235 10 1.548 - 0.813 - - - 0.735 predicted gene 15421 [Source:MGI Symbol;Acc:MGI:3705475]
6. Gm16204 ENSMUSG00000081517 3 1 - 1.000 - - - - predicted gene 16204 [Source:MGI Symbol;Acc:MGI:3801788]
7. Snora21 ENSMUSG00000064901 10 1 - 1.000 - - - - small nucleolar RNA, H/ACA box 21 [Source:MGI Symbol;Acc:MGI:3819493]
8. AA792892 ENSMUSG00000073497 6 1 - - - - - 1.000 expressed sequence AA792892 [Source:MGI Symbol;Acc:MGI:2140789]
9. Gm11993 ENSMUSG00000101841 13 1 - 1.000 - - - - predicted gene 11993 [Source:MGI Symbol;Acc:MGI:3651126]
10. Uox ENSMUSG00000028186 1 1 1.000 - - - - - urate oxidase [Source:MGI Symbol;Acc:MGI:98907]
11. Hspa1l ENSMUSG00000007033 4 1 - - - - - 1.000 heat shock protein 1-like [Source:MGI Symbol;Acc:MGI:96231]
12. Gm10157 ENSMUSG00000066270 5 1 - - - - - 1.000 predicted gene 10157 [Source:MGI Symbol;Acc:MGI:3642264]
13. Gm26786 ENSMUSG00000097026 5 1 1.000 - - - - - predicted gene, 26786 [Source:MGI Symbol;Acc:MGI:5477280]
14. Prps1l1 ENSMUSG00000092305 2 1 - - - - - 1.000 phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:MGI Symbol;Acc:MGI:1922706]
15. Gm21464 Gm21464 1 1 1.000 - - - - -
16. Slc6a12 ENSMUSG00000030109 2 1 - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]
17. Gm17705 ENSMUSG00000090936 11 1 - 1.000 - - - - predicted gene, 17705 [Source:MGI Symbol;Acc:MGI:4937339]
18. A130006I12Rik ENSMUSG00000069136 6 1 - - - - - 1.000 RIKEN cDNA A130006I12 gene [Source:MGI Symbol;Acc:MGI:2441774]
19. A430110L20Rik ENSMUSG00000054135 9 1 1.000 - - - - - RIKEN cDNA A430110L20 gene [Source:MGI Symbol;Acc:MGI:3036249]
20. Scarna8 ENSMUSG00000088958 1 1 - - - - - 1.000 small Cajal body-specific RNA 8 [Source:MGI Symbol;Acc:MGI:3819488]
21. Erich2 ENSMUSG00000075302 10 1 - 1.000 - - - - glutamate rich 2 [Source:MGI Symbol;Acc:MGI:1913998]
22. Lpin3 ENSMUSG00000027412 6 1 1.000 - - - - - lipin 3 [Source:MGI Symbol;Acc:MGI:1891342]
23. Apol6 ENSMUSG00000033576 1 1 - - - - - 1.000 apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
24. 4933406C10Rik ENSMUSG00000097494 9 1 1.000 - - - - - RIKEN cDNA 4933406C10 gene [Source:MGI Symbol;Acc:MGI:1921326]
25. n-R5s196 ENSMUSG00000065070 4 1 - - - - - 1.000 nuclear encoded rRNA 5S 196 [Source:MGI Symbol;Acc:MGI:4422061]
26. Ccl4 ENSMUSG00000018930 2 1 - 1.000 - - - - chemokine (C-C motif) ligand 4 [Source:MGI Symbol;Acc:MGI:98261]
27. Gsto2 ENSMUSG00000025069 15 1 1.000 - - - - - glutathione S-transferase omega 2 [Source:MGI Symbol;Acc:MGI:1915464]
28. 4922502B01Rik 4922502B01Rik 2 1 - - - - - 1.000
29. Gm17137 ENSMUSG00000090559 1 1 1.000 - - - - - predicted gene 17137 [Source:MGI Symbol;Acc:MGI:4937964]
30. Apol7c ENSMUSG00000044309 0 1 - - - - - 1.000 apolipoprotein L 7c [Source:MGI Symbol;Acc:MGI:1920912]
31. Gm22043 ENSMUSG00000064927 1 1 1.000 - - - - - predicted gene, 22043 [Source:MGI Symbol;Acc:MGI:5451820]
32. Aph1c ENSMUSG00000053040 15 1 1.000 - - - - - aph1 homolog C, gamma secretase subunit [Source:MGI Symbol;Acc:MGI:1915568]
33. Tac4 ENSMUSG00000020872 1 1 - 1.000 - - - - tachykinin 4 [Source:MGI Symbol;Acc:MGI:1931130]
34. Pcdhb12 ENSMUSG00000043458 4 1 - - - - - 1.000 protocadherin beta 12 [Source:MGI Symbol;Acc:MGI:2136747]
35. Esr2 ENSMUSG00000021055 9 1 - - - - - 1.000 estrogen receptor 2 (beta) [Source:MGI Symbol;Acc:MGI:109392]
36. Gm15359 Gm15359 4 1 1.000 - - - - -
37. Gm5937 ENSMUSG00000081622 17 1 - 1.000 - - - - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
38. Gm6286 ENSMUSG00000086925 1 1 - 1.000 - - - - predicted gene 6286 [Source:MGI Symbol;Acc:MGI:3646153]
39. 1810065E05Rik ENSMUSG00000013653 9 1 - - - - - 1.000 RIKEN cDNA 1810065E05 gene [Source:MGI Symbol;Acc:MGI:1917114]
40. Thy1 ENSMUSG00000032011 37 1 1.000 - - - - - thymus cell antigen 1, theta [Source:MGI Symbol;Acc:MGI:98747]
41. Agtr1b ENSMUSG00000054988 3 1 - 1.000 - - - - angiotensin II receptor, type 1b [Source:MGI Symbol;Acc:MGI:87965]
42. Gm22027 ENSMUSG00000084686 9 1 1.000 - - - - - predicted gene, 22027 [Source:MGI Symbol;Acc:MGI:5451804]
43. Gm16047 Gm16047 5 1 - - - - - 1.000
44. Rps19-ps4 ENSMUSG00000096699 3 1 - - - - - 1.000 ribosomal protein S19, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3645935]
45. Proc ENSMUSG00000024386 3 1 1.000 - - - - - protein C [Source:MGI Symbol;Acc:MGI:97771]
46. Gm12503 ENSMUSG00000087326 4 1 - - - - - 1.000 predicted gene 12503 [Source:MGI Symbol;Acc:MGI:3651570]
47. Emx1 ENSMUSG00000033726 16 1 1.000 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
48. Gm9376 ENSMUSG00000092109 8 1 - 1.000 - - - - predicted gene 9376 [Source:MGI Symbol;Acc:MGI:3643023]
49. Gm23119 ENSMUSG00000089235 6 1 - 1.000 - - - - predicted gene, 23119 [Source:MGI Symbol;Acc:MGI:5452896]
50. Mmp20 ENSMUSG00000018620 3 1 - 1.000 - - - - matrix metallopeptidase 20 (enamelysin) [Source:MGI Symbol;Acc:MGI:1353466]
51. Ms4a2 ENSMUSG00000024680 1 1 - - - - - 1.000 membrane-spanning 4-domains, subfamily A, member 2 [Source:MGI Symbol;Acc:MGI:95495]
52. Gm26534 ENSMUSG00000097747 19 1 - 1.000 - - - - predicted gene, 26534 [Source:MGI Symbol;Acc:MGI:5477028]
53. 1110002L01Rik ENSMUSG00000071456 4 1 - 1.000 - - - - RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
54. Gm9105 ENSMUSG00000081370 11 1 - 1.000 - - - - predicted gene 9105 [Source:MGI Symbol;Acc:MGI:3648833]
55. Gm26811 ENSMUSG00000097816 0 1 - - - - - 1.000 predicted gene, 26811 [Source:MGI Symbol;Acc:MGI:5477305]
56. Gm12097 ENSMUSG00000081887 11 1 - - - - - 1.000 predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
57. BC089491 6 1 1.000 - - - - - cDNA sequence BC089491
58. P2ry13 ENSMUSG00000036362 46 1 1.000 - - - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
59. Rps12-ps17 ENSMUSG00000095137 1 1 - - - - - 1.000 ribosomal protein S12, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3643968]
60. Igkv6-17 ENSMUSG00000095794 0 1 - - - - - 1.000 immunoglobulin kappa variable 6-17 [Source:MGI Symbol;Acc:MGI:1330833]
61. Gm15131 ENSMUSG00000082961 2 1 - - - - - 1.000 predicted gene 15131 [Source:MGI Symbol;Acc:MGI:3642416]
62. Gm13524 ENSMUSG00000085397 3 1 - 1.000 - - - - predicted gene 13524 [Source:MGI Symbol;Acc:MGI:3651427]
63. Gm7173 ENSMUSG00000073077 5 1 - - - - - 1.000 predicted gene 7173 [Source:MGI Symbol;Acc:MGI:3645063]
64. Gm12093 ENSMUSG00000083917 0 1 - - - - - 1.000 predicted gene 12093 [Source:MGI Symbol;Acc:MGI:3650093]
65. Gja6 ENSMUSG00000055691 36 1 1.000 - - - - - gap junction protein, alpha 6 [Source:MGI Symbol;Acc:MGI:95717]
66. Gm13782 ENSMUSG00000086542 0 1 - - - - - 1.000 predicted gene 13782 [Source:MGI Symbol;Acc:MGI:3649363]
67. Trpm3 ENSMUSG00000052387 4 1 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:MGI Symbol;Acc:MGI:2443101]
68. Tal2 ENSMUSG00000028417 15 1 - 1.000 - - - - T cell acute lymphocytic leukemia 2 [Source:MGI Symbol;Acc:MGI:99540]
69. Gm14927 ENSMUSG00000081546 1 1 1.000 - - - - - predicted gene 14927 [Source:MGI Symbol;Acc:MGI:3708103]
70. Smco2 ENSMUSG00000030292 1 1 1.000 - - - - - single-pass membrane protein with coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916621]
71. Gm11411 ENSMUSG00000083385 12 1 - - - - - 1.000 predicted gene 11411 [Source:MGI Symbol;Acc:MGI:3650904]
72. Stfa2 ENSMUSG00000022902 2 1 - - - - - 1.000 stefin A2 [Source:MGI Symbol;Acc:MGI:106197]
73. Gm20539 ENSMUSG00000092353 1 1 1.000 - - - - - predicted gene 20539 [Source:MGI Symbol;Acc:MGI:5142004]
74. Il24 ENSMUSG00000026420 1 1 1.000 - - - - - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
75. Gm8165 ENSMUSG00000093968 1 1 - 1.000 - - - - predicted gene 8165 [Source:MGI Symbol;Acc:MGI:3648126]
76. A230050P20Rik ENSMUSG00000038884 10 1 - - - - - 1.000 RIKEN cDNA A230050P20 gene [Source:MGI Symbol;Acc:MGI:2441788]
77. Rab42 ENSMUSG00000089687 6 1 1.000 - - - - - RAB42, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2441753]
78. Gm7507 ENSMUSG00000098142 3 1 - 1.000 - - - - predicted gene 7507 [Source:MGI Symbol;Acc:MGI:3643248]
79. Gm26384 ENSMUSG00000076137 3 1 - - - - - 1.000 predicted gene, 26384 [Source:MGI Symbol;Acc:MGI:5456161]
80. Trpc7 ENSMUSG00000021541 3 1 - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 7 [Source:MGI Symbol;Acc:MGI:1349470]
81. 5530401N12Rik 5530401N12Rik 5 1 - - - - - 1.000
82. Cep85l ENSMUSG00000038594 51 1 - - - - - 1.000 centrosomal protein 85-like [Source:MGI Symbol;Acc:MGI:3642684]
83. Gm16027 ENSMUSG00000090041 1 1 1.000 - - - - - predicted gene 16027 [Source:MGI Symbol;Acc:MGI:3801732]
84. Abca6 ENSMUSG00000044749 7 1 - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 6 [Source:MGI Symbol;Acc:MGI:1923434]
85. Nobox ENSMUSG00000029736 1 1 - - - - - 1.000 NOBOX oogenesis homeobox [Source:MGI Symbol;Acc:MGI:108011]
86. Gm26805 ENSMUSG00000097268 14 1 - 1.000 - - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
87. Gm6526 ENSMUSG00000091698 1 1 - - - - - 1.000 predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
88. Tnr ENSMUSG00000015829 1 1 1.000 - - - - - tenascin R [Source:MGI Symbol;Acc:MGI:99516]
89. Gm11221 ENSMUSG00000082998 16 1 - - - - - 1.000 predicted gene 11221 [Source:MGI Symbol;Acc:MGI:3651633]
90. Tmem181b-ps ENSMUSG00000096780 8 1 - 1.000 - - - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
91. Gm12204 ENSMUSG00000086493 2 1 1.000 - - - - - predicted gene 12204 [Source:MGI Symbol;Acc:MGI:3650262]
92. Ern2 ENSMUSG00000030866 6 1 1.000 - - - - - endoplasmic reticulum (ER) to nucleus signalling 2 [Source:MGI Symbol;Acc:MGI:1349436]
93. Crct1 ENSMUSG00000027913 9 1 1.000 - - - - - cysteine-rich C-terminal 1 [Source:MGI Symbol;Acc:MGI:1921425]
94. Ifi27l2a ENSMUSG00000079017 5 1 1.000 - - - - - interferon, alpha-inducible protein 27 like 2A [Source:MGI Symbol;Acc:MGI:1924183]
95. Gm10224 ENSMUSG00000080932 30 1 - - - - - 1.000 predicted pseudogene 10224 [Source:MGI Symbol;Acc:MGI:3642708]
96. 1700122E12Rik ENSMUSG00000087685 6 1 1.000 - - - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
97. Gm14243 ENSMUSG00000067745 1 1 - 1.000 - - - - predicted gene 14243 [Source:MGI Symbol;Acc:MGI:3651252]
98. Tchhl1 ENSMUSG00000027908 1 1 1.000 - - - - - trichohyalin-like 1 [Source:MGI Symbol;Acc:MGI:1918575]
99. Adam1a ENSMUSG00000072647 1 1 1.000 - - - - - a disintegrin and metallopeptidase domain 1a [Source:MGI Symbol;Acc:MGI:2429504]
100. 4930591A17Rik ENSMUSG00000039138 1 1 - - - - - 1.000 RIKEN cDNA 4930591A17 gene [Source:MGI Symbol;Acc:MGI:1915425]

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA