Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx1

Gene Name Gene ID Reads Annotation
Cdx1 ENSMUSG00000024619 3 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]







Genes with expression patterns similar to Cdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx1 ENSMUSG00000024619 3 4 1.000 1.000 1.000 - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
2. Gm26792 ENSMUSG00000096996 3 2 - 1.000 - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
3. 4632411P08Rik ENSMUSG00000097561 13 1.774 0.774 - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
4. Fam187b ENSMUSG00000046826 18 1.56 0.703 - - - - 0.857 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
5. Gm15421 ENSMUSG00000084235 10 1.548 - 0.813 - - - 0.735 predicted gene 15421 [Source:MGI Symbol;Acc:MGI:3705475]
6. Emx1 ENSMUSG00000033726 16 1 1.000 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
7. Hist1h4h ENSMUSG00000060981 14 1 - - - - - 1.000 histone cluster 1, H4h [Source:MGI Symbol;Acc:MGI:2448427]
8. 4930591A17Rik ENSMUSG00000039138 1 1 - - - - - 1.000 RIKEN cDNA 4930591A17 gene [Source:MGI Symbol;Acc:MGI:1915425]
9. Snora21 ENSMUSG00000064901 10 1 - 1.000 - - - - small nucleolar RNA, H/ACA box 21 [Source:MGI Symbol;Acc:MGI:3819493]
10. Uox ENSMUSG00000028186 1 1 1.000 - - - - - urate oxidase [Source:MGI Symbol;Acc:MGI:98907]
11. Gm7584 ENSMUSG00000093537 3 1 - 1.000 - - - - predicted gene 7584 [Source:MGI Symbol;Acc:MGI:3647027]
12. Gm13782 ENSMUSG00000086542 0 1 - - - - - 1.000 predicted gene 13782 [Source:MGI Symbol;Acc:MGI:3649363]
13. Gm26786 ENSMUSG00000097026 5 1 1.000 - - - - - predicted gene, 26786 [Source:MGI Symbol;Acc:MGI:5477280]
14. Gm14243 ENSMUSG00000067745 1 1 - 1.000 - - - - predicted gene 14243 [Source:MGI Symbol;Acc:MGI:3651252]
15. Gm9 ENSMUSG00000073243 2 1 - - - - - 1.000 predicted gene 9 [Source:MGI Symbol;Acc:MGI:2684855]
16. P2ry13 ENSMUSG00000036362 46 1 1.000 - - - - - purinergic receptor P2Y, G-protein coupled 13 [Source:MGI Symbol;Acc:MGI:1921441]
17. Gm25197 ENSMUSG00000095943 3 1 1.000 - - - - - predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
18. Il24 ENSMUSG00000026420 1 1 1.000 - - - - - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
19. Abca6 ENSMUSG00000044749 7 1 - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 6 [Source:MGI Symbol;Acc:MGI:1923434]
20. Gm14714 ENSMUSG00000081697 18 1 - 1.000 - - - - predicted gene 14714 [Source:MGI Symbol;Acc:MGI:3705345]
21. Apol6 ENSMUSG00000033576 1 1 - - - - - 1.000 apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
22. 1810065E05Rik ENSMUSG00000013653 9 1 - - - - - 1.000 RIKEN cDNA 1810065E05 gene [Source:MGI Symbol;Acc:MGI:1917114]
23. Rab42 ENSMUSG00000089687 6 1 1.000 - - - - - RAB42, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2441753]
24. Cpb1 ENSMUSG00000011463 3 1 - - - - - 1.000 carboxypeptidase B1 (tissue) [Source:MGI Symbol;Acc:MGI:1923953]
25. Gm17566 Gm17566 24 1 - 1.000 - - - -
26. Slc15a1 ENSMUSG00000025557 5 1 - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
27. 4930505N22Rik ENSMUSG00000097690 3 1 - - - - - 1.000 RIKEN cDNA 4930505N22 gene [Source:MGI Symbol;Acc:MGI:1922306]
28. Slc8a1 ENSMUSG00000054640 12 1 - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
29. n-R5s196 ENSMUSG00000065070 4 1 - - - - - 1.000 nuclear encoded rRNA 5S 196 [Source:MGI Symbol;Acc:MGI:4422061]
30. Smco2 ENSMUSG00000030292 1 1 1.000 - - - - - single-pass membrane protein with coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916621]
31. Gm17137 ENSMUSG00000090559 1 1 1.000 - - - - - predicted gene 17137 [Source:MGI Symbol;Acc:MGI:4937964]
32. 4922502B01Rik 4922502B01Rik 2 1 - - - - - 1.000
33. Colec11 ENSMUSG00000036655 47 1 1.000 - - - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
34. 1700122E12Rik ENSMUSG00000087685 6 1 1.000 - - - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
35. Gm15587 ENSMUSG00000086769 0 1 - - - - - 1.000 predicted gene 15587 [Source:MGI Symbol;Acc:MGI:3783035]
36. Cst8 ENSMUSG00000027442 4 1 - - - - - 1.000 cystatin 8 (cystatin-related epididymal spermatogenic) [Source:MGI Symbol;Acc:MGI:107161]
37. Gm12503 ENSMUSG00000087326 4 1 - - - - - 1.000 predicted gene 12503 [Source:MGI Symbol;Acc:MGI:3651570]
38. Gm15794 ENSMUSG00000084108 0 1 - - - - - 1.000 predicted gene 15794 [Source:MGI Symbol;Acc:MGI:3783236]
39. Gm16027 ENSMUSG00000090041 1 1 1.000 - - - - - predicted gene 16027 [Source:MGI Symbol;Acc:MGI:3801732]
40. Zfp78 ENSMUSG00000055150 2 1 1.000 - - - - - zinc finger protein 78 [Source:MGI Symbol;Acc:MGI:107783]
41. 1700064E03Rik 1700064E03Rik 8 1 - - - - - 1.000
42. Tchhl1 ENSMUSG00000027908 1 1 1.000 - - - - - trichohyalin-like 1 [Source:MGI Symbol;Acc:MGI:1918575]
43. Trpc7 ENSMUSG00000021541 3 1 - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 7 [Source:MGI Symbol;Acc:MGI:1349470]
44. Hr ENSMUSG00000022096 11 1 - - - - - 1.000 hairless [Source:MGI Symbol;Acc:MGI:96223]
45. Lpin3 ENSMUSG00000027412 6 1 1.000 - - - - - lipin 3 [Source:MGI Symbol;Acc:MGI:1891342]
46. 1700028E10Rik ENSMUSG00000097321 1 1 - - - - - 1.000 RIKEN cDNA 1700028E10 gene [Source:MGI Symbol;Acc:MGI:1916713]
47. Scarna8 ENSMUSG00000088958 1 1 - - - - - 1.000 small Cajal body-specific RNA 8 [Source:MGI Symbol;Acc:MGI:3819488]
48. Rln1 ENSMUSG00000039097 15 1 - 1.000 - - - - relaxin 1 [Source:MGI Symbol;Acc:MGI:97931]
49. Slc6a7 ENSMUSG00000052026 10 1 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 [Source:MGI Symbol;Acc:MGI:2147363]
50. Khdc1a ENSMUSG00000067750 3 1 - - - - - 1.000 KH domain containing 1A [Source:MGI Symbol;Acc:MGI:2676610]
51. Prss32 ENSMUSG00000048992 1 1 - 1.000 - - - - protease, serine 32 [Source:MGI Symbol;Acc:MGI:1917064]
52. Tuba3a ENSMUSG00000067702 2 1 - 1.000 - - - - tubulin, alpha 3A [Source:MGI Symbol;Acc:MGI:1095406]
53. Gm26783 ENSMUSG00000097435 1 1 1.000 - - - - - predicted gene, 26783 [Source:MGI Symbol;Acc:MGI:5477277]
54. Gm26484 ENSMUSG00000088643 2 1 - - - - - 1.000 predicted gene, 26484 [Source:MGI Symbol;Acc:MGI:5456261]
55. Gm12090 ENSMUSG00000081575 4 1 - - - - - 1.000 predicted gene 12090 [Source:MGI Symbol;Acc:MGI:3650090]
56. Gm11411 ENSMUSG00000083385 12 1 - - - - - 1.000 predicted gene 11411 [Source:MGI Symbol;Acc:MGI:3650904]
57. Rps19-ps4 ENSMUSG00000096699 3 1 - - - - - 1.000 ribosomal protein S19, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3645935]
58. Gm9105 ENSMUSG00000081370 11 1 - 1.000 - - - - predicted gene 9105 [Source:MGI Symbol;Acc:MGI:3648833]
59. Gm15359 Gm15359 4 1 1.000 - - - - -
60. Ccl4 ENSMUSG00000018930 2 1 - 1.000 - - - - chemokine (C-C motif) ligand 4 [Source:MGI Symbol;Acc:MGI:98261]
61. Gm12204 ENSMUSG00000086493 2 1 1.000 - - - - - predicted gene 12204 [Source:MGI Symbol;Acc:MGI:3650262]
62. Gm9376 ENSMUSG00000092109 8 1 - 1.000 - - - - predicted gene 9376 [Source:MGI Symbol;Acc:MGI:3643023]
63. Gm5937 ENSMUSG00000081622 17 1 - 1.000 - - - - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
64. Gm17705 ENSMUSG00000090936 11 1 - 1.000 - - - - predicted gene, 17705 [Source:MGI Symbol;Acc:MGI:4937339]
65. Gm14927 ENSMUSG00000081546 1 1 1.000 - - - - - predicted gene 14927 [Source:MGI Symbol;Acc:MGI:3708103]
66. Gm10737 Gm10737 2 1 1.000 - - - - -
67. Gm10774 ENSMUSG00000074846 3 1 - 1.000 - - - - predicted pseudogene 10774 [Source:MGI Symbol;Acc:MGI:3642325]
68. Ern2 ENSMUSG00000030866 6 1 1.000 - - - - - endoplasmic reticulum (ER) to nucleus signalling 2 [Source:MGI Symbol;Acc:MGI:1349436]
69. Gm7869 ENSMUSG00000081668 2 1 1.000 - - - - - predicted gene 7869 [Source:MGI Symbol;Acc:MGI:3644630]
70. Gm7507 ENSMUSG00000098142 3 1 - 1.000 - - - - predicted gene 7507 [Source:MGI Symbol;Acc:MGI:3643248]
71. Agtr1b ENSMUSG00000054988 3 1 - 1.000 - - - - angiotensin II receptor, type 1b [Source:MGI Symbol;Acc:MGI:87965]
72. Itih4 ENSMUSG00000021922 7 1 - - - - - 1.000 inter alpha-trypsin inhibitor, heavy chain 4 [Source:MGI Symbol;Acc:MGI:109536]
73. Cep85l ENSMUSG00000038594 51 1 - - - - - 1.000 centrosomal protein 85-like [Source:MGI Symbol;Acc:MGI:3642684]
74. 1110002L01Rik ENSMUSG00000071456 4 1 - 1.000 - - - - RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
75. Muc6 ENSMUSG00000048191 6 1 - - - - - 1.000 mucin 6, gastric [Source:MGI Symbol;Acc:MGI:2663233]
76. Aph1c ENSMUSG00000053040 15 1 1.000 - - - - - aph1 homolog C, gamma secretase subunit [Source:MGI Symbol;Acc:MGI:1915568]
77. Gm10224 ENSMUSG00000080932 30 1 - - - - - 1.000 predicted pseudogene 10224 [Source:MGI Symbol;Acc:MGI:3642708]
78. Gm22027 ENSMUSG00000084686 9 1 1.000 - - - - - predicted gene, 22027 [Source:MGI Symbol;Acc:MGI:5451804]
79. Gm5446 ENSMUSG00000050243 19 1 - - - - - 1.000 predicted gene 5446 [Source:MGI Symbol;Acc:MGI:3644854]
80. Pth2r ENSMUSG00000025946 5 1 - 1.000 - - - - parathyroid hormone 2 receptor [Source:MGI Symbol;Acc:MGI:2180917]
81. Tac4 ENSMUSG00000020872 1 1 - 1.000 - - - - tachykinin 4 [Source:MGI Symbol;Acc:MGI:1931130]
82. Irs3 ENSMUSG00000047182 11 1 - - - - - 1.000 insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
83. Gm8165 ENSMUSG00000093968 1 1 - 1.000 - - - - predicted gene 8165 [Source:MGI Symbol;Acc:MGI:3648126]
84. Trpm3 ENSMUSG00000052387 4 1 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:MGI Symbol;Acc:MGI:2443101]
85. A230050P20Rik ENSMUSG00000038884 10 1 - - - - - 1.000 RIKEN cDNA A230050P20 gene [Source:MGI Symbol;Acc:MGI:2441788]
86. Gm20539 ENSMUSG00000092353 1 1 1.000 - - - - - predicted gene 20539 [Source:MGI Symbol;Acc:MGI:5142004]
87. Thy1 ENSMUSG00000032011 37 1 1.000 - - - - - thymus cell antigen 1, theta [Source:MGI Symbol;Acc:MGI:98747]
88. B4galnt2 ENSMUSG00000013418 1 1 1.000 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
89. Gm11464 ENSMUSG00000087351 13 1 - - - - - 1.000 predicted gene 11464 [Source:MGI Symbol;Acc:MGI:3650572]
90. Gm13151 Gm13151 9 1 - - - - - 1.000
91. Pcdhb12 ENSMUSG00000043458 4 1 - - - - - 1.000 protocadherin beta 12 [Source:MGI Symbol;Acc:MGI:2136747]
92. Gm15131 ENSMUSG00000082961 2 1 - - - - - 1.000 predicted gene 15131 [Source:MGI Symbol;Acc:MGI:3642416]
93. Cabyr ENSMUSG00000024430 7 1 1.000 - - - - - calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) [Source:MGI Symbol;Acc:MGI:1918382]
94. Esr2 ENSMUSG00000021055 9 1 - - - - - 1.000 estrogen receptor 2 (beta) [Source:MGI Symbol;Acc:MGI:109392]
95. Gm13524 ENSMUSG00000085397 3 1 - 1.000 - - - - predicted gene 13524 [Source:MGI Symbol;Acc:MGI:3651427]
96. Prps1l1 ENSMUSG00000092305 2 1 - - - - - 1.000 phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:MGI Symbol;Acc:MGI:1922706]
97. Gm15705 Gm15705 2 1 - - - - - 1.000
98. Gm20036 ENSMUSG00000093579 0 1 - - - - - 1.000 predicted gene, 20036 [Source:MGI Symbol;Acc:MGI:5012221]
99. Gm23119 ENSMUSG00000089235 6 1 - 1.000 - - - - predicted gene, 23119 [Source:MGI Symbol;Acc:MGI:5452896]
100. 1810063I02Rik ENSMUSG00000085551 4 1 - - - - - 1.000 RIKEN cDNA 1810063I02 gene [Source:MGI Symbol;Acc:MGI:1917104]

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA