Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx1

Gene Name Gene ID Reads Annotation
Cdx1 ENSMUSG00000024619 3 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]







Genes with expression patterns similar to Cdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx1 ENSMUSG00000024619 3 4 1.000 1.000 1.000 - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
2. Gm26792 ENSMUSG00000096996 3 2 - 1.000 - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
3. 4632411P08Rik ENSMUSG00000097561 13 1.774 0.774 - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
4. Fam187b ENSMUSG00000046826 18 1.56 0.703 - - - - 0.857 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
5. Gm15421 ENSMUSG00000084235 10 1.548 - 0.813 - - - 0.735 predicted gene 15421 [Source:MGI Symbol;Acc:MGI:3705475]
6. Hspa1l ENSMUSG00000007033 4 1 - - - - - 1.000 heat shock protein 1-like [Source:MGI Symbol;Acc:MGI:96231]
7. Pth2r ENSMUSG00000025946 5 1 - 1.000 - - - - parathyroid hormone 2 receptor [Source:MGI Symbol;Acc:MGI:2180917]
8. Gm5937 ENSMUSG00000081622 17 1 - 1.000 - - - - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
9. Adam1a ENSMUSG00000072647 1 1 1.000 - - - - - a disintegrin and metallopeptidase domain 1a [Source:MGI Symbol;Acc:MGI:2429504]
10. Btbd8 ENSMUSG00000111375 18 1 - - - - - 1.000 BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:3646208]
11. Gm25197 ENSMUSG00000095943 3 1 1.000 - - - - - predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
12. 4930505N22Rik ENSMUSG00000097690 3 1 - - - - - 1.000 RIKEN cDNA 4930505N22 gene [Source:MGI Symbol;Acc:MGI:1922306]
13. Mmp20 ENSMUSG00000018620 3 1 - 1.000 - - - - matrix metallopeptidase 20 (enamelysin) [Source:MGI Symbol;Acc:MGI:1353466]
14. I830134H01Rik ENSMUSG00000069554 0 1 - - - - - 1.000 RIKEN cDNA I830134H01 gene [Source:MGI Symbol;Acc:MGI:3588250]
15. Gm10157 ENSMUSG00000066270 5 1 - - - - - 1.000 predicted gene 10157 [Source:MGI Symbol;Acc:MGI:3642264]
16. Ern2 ENSMUSG00000030866 6 1 1.000 - - - - - endoplasmic reticulum (ER) to nucleus signalling 2 [Source:MGI Symbol;Acc:MGI:1349436]
17. Gm15131 ENSMUSG00000082961 2 1 - - - - - 1.000 predicted gene 15131 [Source:MGI Symbol;Acc:MGI:3642416]
18. A130006I12Rik ENSMUSG00000069136 6 1 - - - - - 1.000 RIKEN cDNA A130006I12 gene [Source:MGI Symbol;Acc:MGI:2441774]
19. 1700122E12Rik ENSMUSG00000087685 6 1 1.000 - - - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
20. Gm12097 ENSMUSG00000081887 11 1 - - - - - 1.000 predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
21. 9930022D16Rik ENSMUSG00000045065 2 1 1.000 - - - - - RIKEN cDNA 9930022D16 gene [Source:MGI Symbol;Acc:MGI:2444178]
22. Gm26534 ENSMUSG00000097747 19 1 - 1.000 - - - - predicted gene, 26534 [Source:MGI Symbol;Acc:MGI:5477028]
23. Igkv6-17 ENSMUSG00000095794 0 1 - - - - - 1.000 immunoglobulin kappa variable 6-17 [Source:MGI Symbol;Acc:MGI:1330833]
24. Hoxd11 ENSMUSG00000042499 16 1 - - - - - 1.000 homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
25. Cpb1 ENSMUSG00000011463 3 1 - - - - - 1.000 carboxypeptidase B1 (tissue) [Source:MGI Symbol;Acc:MGI:1923953]
26. Gm13524 ENSMUSG00000085397 3 1 - 1.000 - - - - predicted gene 13524 [Source:MGI Symbol;Acc:MGI:3651427]
27. Gm10224 ENSMUSG00000080932 30 1 - - - - - 1.000 predicted pseudogene 10224 [Source:MGI Symbol;Acc:MGI:3642708]
28. Gm7173 ENSMUSG00000073077 5 1 - - - - - 1.000 predicted gene 7173 [Source:MGI Symbol;Acc:MGI:3645063]
29. Gm11993 ENSMUSG00000101841 13 1 - 1.000 - - - - predicted gene 11993 [Source:MGI Symbol;Acc:MGI:3651126]
30. Khdc1a ENSMUSG00000067750 3 1 - - - - - 1.000 KH domain containing 1A [Source:MGI Symbol;Acc:MGI:2676610]
31. Slc8a1 ENSMUSG00000054640 12 1 - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
32. Gm12090 ENSMUSG00000081575 4 1 - - - - - 1.000 predicted gene 12090 [Source:MGI Symbol;Acc:MGI:3650090]
33. Emx1 ENSMUSG00000033726 16 1 1.000 - - - - - empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
34. Gm17705 ENSMUSG00000090936 11 1 - 1.000 - - - - predicted gene, 17705 [Source:MGI Symbol;Acc:MGI:4937339]
35. Apol6 ENSMUSG00000033576 1 1 - - - - - 1.000 apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
36. Irs3 ENSMUSG00000047182 11 1 - - - - - 1.000 insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
37. Apol7c ENSMUSG00000044309 0 1 - - - - - 1.000 apolipoprotein L 7c [Source:MGI Symbol;Acc:MGI:1920912]
38. n-R5s196 ENSMUSG00000065070 4 1 - - - - - 1.000 nuclear encoded rRNA 5S 196 [Source:MGI Symbol;Acc:MGI:4422061]
39. Gm22027 ENSMUSG00000084686 9 1 1.000 - - - - - predicted gene, 22027 [Source:MGI Symbol;Acc:MGI:5451804]
40. Nobox ENSMUSG00000029736 1 1 - - - - - 1.000 NOBOX oogenesis homeobox [Source:MGI Symbol;Acc:MGI:108011]
41. Gm9376 ENSMUSG00000092109 8 1 - 1.000 - - - - predicted gene 9376 [Source:MGI Symbol;Acc:MGI:3643023]
42. Gsto2 ENSMUSG00000025069 15 1 1.000 - - - - - glutathione S-transferase omega 2 [Source:MGI Symbol;Acc:MGI:1915464]
43. B4galnt2 ENSMUSG00000013418 1 1 1.000 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
44. Erich2 ENSMUSG00000075302 10 1 - 1.000 - - - - glutamate rich 2 [Source:MGI Symbol;Acc:MGI:1913998]
45. Gm17566 Gm17566 24 1 - 1.000 - - - -
46. Gm26805 ENSMUSG00000097268 14 1 - 1.000 - - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
47. Rln1 ENSMUSG00000039097 15 1 - 1.000 - - - - relaxin 1 [Source:MGI Symbol;Acc:MGI:97931]
48. Gm9105 ENSMUSG00000081370 11 1 - 1.000 - - - - predicted gene 9105 [Source:MGI Symbol;Acc:MGI:3648833]
49. Gm15359 Gm15359 4 1 1.000 - - - - -
50. A230050P20Rik ENSMUSG00000038884 10 1 - - - - - 1.000 RIKEN cDNA A230050P20 gene [Source:MGI Symbol;Acc:MGI:2441788]
51. Gm12357 Gm12357 0 1 - - - - - 1.000
52. Gm26484 ENSMUSG00000088643 2 1 - - - - - 1.000 predicted gene, 26484 [Source:MGI Symbol;Acc:MGI:5456261]
53. Ccl4 ENSMUSG00000018930 2 1 - 1.000 - - - - chemokine (C-C motif) ligand 4 [Source:MGI Symbol;Acc:MGI:98261]
54. Gm16204 ENSMUSG00000081517 3 1 - 1.000 - - - - predicted gene 16204 [Source:MGI Symbol;Acc:MGI:3801788]
55. Pcdhb12 ENSMUSG00000043458 4 1 - - - - - 1.000 protocadherin beta 12 [Source:MGI Symbol;Acc:MGI:2136747]
56. Gm15705 Gm15705 2 1 - - - - - 1.000
57. Esr2 ENSMUSG00000021055 9 1 - - - - - 1.000 estrogen receptor 2 (beta) [Source:MGI Symbol;Acc:MGI:109392]
58. Gm22043 ENSMUSG00000064927 1 1 1.000 - - - - - predicted gene, 22043 [Source:MGI Symbol;Acc:MGI:5451820]
59. Slc6a18 ENSMUSG00000021612 3 1 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter), member 18 [Source:MGI Symbol;Acc:MGI:1336892]
60. Pklr ENSMUSG00000041237 3 1 - - - - - 1.000 pyruvate kinase liver and red blood cell [Source:MGI Symbol;Acc:MGI:97604]
61. Proc ENSMUSG00000024386 3 1 1.000 - - - - - protein C [Source:MGI Symbol;Acc:MGI:97771]
62. Ms4a2 ENSMUSG00000024680 1 1 - - - - - 1.000 membrane-spanning 4-domains, subfamily A, member 2 [Source:MGI Symbol;Acc:MGI:95495]
63. Gm16027 ENSMUSG00000090041 1 1 1.000 - - - - - predicted gene 16027 [Source:MGI Symbol;Acc:MGI:3801732]
64. Tnr ENSMUSG00000015829 1 1 1.000 - - - - - tenascin R [Source:MGI Symbol;Acc:MGI:99516]
65. Gm11464 ENSMUSG00000087351 13 1 - - - - - 1.000 predicted gene 11464 [Source:MGI Symbol;Acc:MGI:3650572]
66. Lpin3 ENSMUSG00000027412 6 1 1.000 - - - - - lipin 3 [Source:MGI Symbol;Acc:MGI:1891342]
67. Gm7869 ENSMUSG00000081668 2 1 1.000 - - - - - predicted gene 7869 [Source:MGI Symbol;Acc:MGI:3644630]
68. 4922502B01Rik 4922502B01Rik 2 1 - - - - - 1.000
69. Slc6a12 ENSMUSG00000030109 2 1 - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]
70. Trpm3 ENSMUSG00000052387 4 1 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:MGI Symbol;Acc:MGI:2443101]
71. Stfa2 ENSMUSG00000022902 2 1 - - - - - 1.000 stefin A2 [Source:MGI Symbol;Acc:MGI:106197]
72. Snora21 ENSMUSG00000064901 10 1 - 1.000 - - - - small nucleolar RNA, H/ACA box 21 [Source:MGI Symbol;Acc:MGI:3819493]
73. Cd160 ENSMUSG00000038304 1 1 - - - - - 1.000 CD160 antigen [Source:MGI Symbol;Acc:MGI:1860383]
74. Gm7507 ENSMUSG00000098142 3 1 - 1.000 - - - - predicted gene 7507 [Source:MGI Symbol;Acc:MGI:3643248]
75. 4930426L09Rik ENSMUSG00000026736 4 1 - - - - - 1.000 RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
76. Gm8165 ENSMUSG00000093968 1 1 - 1.000 - - - - predicted gene 8165 [Source:MGI Symbol;Acc:MGI:3648126]
77. Gm13151 Gm13151 9 1 - - - - - 1.000
78. Slc6a7 ENSMUSG00000052026 10 1 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 [Source:MGI Symbol;Acc:MGI:2147363]
79. Gm17196 ENSMUSG00000090708 11 1 - 1.000 - - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
80. Gm17028 ENSMUSG00000090638 1 1 1.000 - - - - - predicted gene 17028 [Source:MGI Symbol;Acc:MGI:4937855]
81. Gm12093 ENSMUSG00000083917 0 1 - - - - - 1.000 predicted gene 12093 [Source:MGI Symbol;Acc:MGI:3650093]
82. Gm6286 ENSMUSG00000086925 1 1 - 1.000 - - - - predicted gene 6286 [Source:MGI Symbol;Acc:MGI:3646153]
83. Colec11 ENSMUSG00000036655 47 1 1.000 - - - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
84. A430110L20Rik ENSMUSG00000054135 9 1 1.000 - - - - - RIKEN cDNA A430110L20 gene [Source:MGI Symbol;Acc:MGI:3036249]
85. Tal2 ENSMUSG00000028417 15 1 - 1.000 - - - - T cell acute lymphocytic leukemia 2 [Source:MGI Symbol;Acc:MGI:99540]
86. Gm10774 ENSMUSG00000074846 3 1 - 1.000 - - - - predicted pseudogene 10774 [Source:MGI Symbol;Acc:MGI:3642325]
87. RP23-308M1.2 RP23-308M1.2 2 1 1.000 - - - - -
88. Hist1h4h ENSMUSG00000060981 14 1 - - - - - 1.000 histone cluster 1, H4h [Source:MGI Symbol;Acc:MGI:2448427]
89. Tmem181b-ps ENSMUSG00000096780 8 1 - 1.000 - - - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
90. Abca6 ENSMUSG00000044749 7 1 - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 6 [Source:MGI Symbol;Acc:MGI:1923434]
91. 1810065E05Rik ENSMUSG00000013653 9 1 - - - - - 1.000 RIKEN cDNA 1810065E05 gene [Source:MGI Symbol;Acc:MGI:1917114]
92. Rab42 ENSMUSG00000089687 6 1 1.000 - - - - - RAB42, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2441753]
93. 1700064E03Rik 1700064E03Rik 8 1 - - - - - 1.000
94. Gm23119 ENSMUSG00000089235 6 1 - 1.000 - - - - predicted gene, 23119 [Source:MGI Symbol;Acc:MGI:5452896]
95. C1qtnf9 ENSMUSG00000071347 6 1 1.000 - - - - - C1q and tumor necrosis factor related protein 9 [Source:MGI Symbol;Acc:MGI:3045252]
96. Uox ENSMUSG00000028186 1 1 1.000 - - - - - urate oxidase [Source:MGI Symbol;Acc:MGI:98907]
97. Slc15a1 ENSMUSG00000025557 5 1 - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
98. Gm17137 ENSMUSG00000090559 1 1 1.000 - - - - - predicted gene 17137 [Source:MGI Symbol;Acc:MGI:4937964]
99. Crct1 ENSMUSG00000027913 9 1 1.000 - - - - - cysteine-rich C-terminal 1 [Source:MGI Symbol;Acc:MGI:1921425]
100. 4933406C10Rik ENSMUSG00000097494 9 1 1.000 - - - - - RIKEN cDNA 4933406C10 gene [Source:MGI Symbol;Acc:MGI:1921326]

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA