Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdx1

Gene Name Gene ID Reads Annotation
Cdx1 ENSMUSG00000024619 3 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]







Genes with expression patterns similar to Cdx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdx1 ENSMUSG00000024619 3 4 1.000 1.000 1.000 - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
2. Gm26792 ENSMUSG00000096996 3 2 - 1.000 - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
3. 4632411P08Rik ENSMUSG00000097561 13 1.774 0.774 - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
4. Fam187b ENSMUSG00000046826 18 1.56 0.703 - - - - 0.857 family with sequence similarity 187, member B [Source:MGI Symbol;Acc:MGI:1923665]
5. Gm15421 ENSMUSG00000084235 10 1.548 - 0.813 - - - 0.735 predicted gene 15421 [Source:MGI Symbol;Acc:MGI:3705475]
6. 4930519D14Rik ENSMUSG00000086263 2 1 - - - - - 1.000 RIKEN cDNA 4930519D14 gene [Source:MGI Symbol;Acc:MGI:1922340]
7. Rln1 ENSMUSG00000039097 15 1 - 1.000 - - - - relaxin 1 [Source:MGI Symbol;Acc:MGI:97931]
8. Slc8a1 ENSMUSG00000054640 12 1 - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
9. Btbd8 ENSMUSG00000111375 18 1 - - - - - 1.000 BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:3646208]
10. Gm17597 ENSMUSG00000097613 0 1 - - - - - 1.000 predicted gene, 17597 [Source:MGI Symbol;Acc:MGI:4937231]
11. Gm10774 ENSMUSG00000074846 3 1 - 1.000 - - - - predicted pseudogene 10774 [Source:MGI Symbol;Acc:MGI:3642325]
12. Gm7869 ENSMUSG00000081668 2 1 1.000 - - - - - predicted gene 7869 [Source:MGI Symbol;Acc:MGI:3644630]
13. B4galnt2 ENSMUSG00000013418 1 1 1.000 - - - - - beta-1,4-N-acetyl-galactosaminyl transferase 2 [Source:MGI Symbol;Acc:MGI:1342058]
14. Muc6 ENSMUSG00000048191 6 1 - - - - - 1.000 mucin 6, gastric [Source:MGI Symbol;Acc:MGI:2663233]
15. 4930444M15Rik ENSMUSG00000097172 7 1 1.000 - - - - - RIKEN cDNA 4930444M15 gene [Source:MGI Symbol;Acc:MGI:1923039]
16. Hist1h4h ENSMUSG00000060981 14 1 - - - - - 1.000 histone cluster 1, H4h [Source:MGI Symbol;Acc:MGI:2448427]
17. Prss56 ENSMUSG00000036480 4 1 - 1.000 - - - - protease, serine 56 [Source:MGI Symbol;Acc:MGI:1916703]
18. Zfp78 ENSMUSG00000055150 2 1 1.000 - - - - - zinc finger protein 78 [Source:MGI Symbol;Acc:MGI:107783]
19. 4930594C11Rik ENSMUSG00000103948 5 1 1.000 - - - - - RIKEN cDNA 4930594C11 gene [Source:MGI Symbol;Acc:MGI:1924883]
20. Gm26783 ENSMUSG00000097435 1 1 1.000 - - - - - predicted gene, 26783 [Source:MGI Symbol;Acc:MGI:5477277]
21. Gm12090 ENSMUSG00000081575 4 1 - - - - - 1.000 predicted gene 12090 [Source:MGI Symbol;Acc:MGI:3650090]
22. 9930022D16Rik ENSMUSG00000045065 2 1 1.000 - - - - - RIKEN cDNA 9930022D16 gene [Source:MGI Symbol;Acc:MGI:2444178]
23. Slc15a1 ENSMUSG00000025557 5 1 - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
24. RP23-308M1.2 RP23-308M1.2 2 1 1.000 - - - - -
25. Gm14714 ENSMUSG00000081697 18 1 - 1.000 - - - - predicted gene 14714 [Source:MGI Symbol;Acc:MGI:3705345]
26. Gm20036 ENSMUSG00000093579 0 1 - - - - - 1.000 predicted gene, 20036 [Source:MGI Symbol;Acc:MGI:5012221]
27. Prss16 ENSMUSG00000006179 6 1 - - - - - 1.000 protease, serine 16 (thymus) [Source:MGI Symbol;Acc:MGI:1859181]
28. Colec11 ENSMUSG00000036655 47 1 1.000 - - - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
29. Prss32 ENSMUSG00000048992 1 1 - 1.000 - - - - protease, serine 32 [Source:MGI Symbol;Acc:MGI:1917064]
30. Gm10737 Gm10737 2 1 1.000 - - - - -
31. Slc6a7 ENSMUSG00000052026 10 1 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 [Source:MGI Symbol;Acc:MGI:2147363]
32. 4930505N22Rik ENSMUSG00000097690 3 1 - - - - - 1.000 RIKEN cDNA 4930505N22 gene [Source:MGI Symbol;Acc:MGI:1922306]
33. Prss39 ENSMUSG00000026125 1 1 - 1.000 - - - - protease, serine 39 [Source:MGI Symbol;Acc:MGI:1270856]
34. I830134H01Rik ENSMUSG00000069554 0 1 - - - - - 1.000 RIKEN cDNA I830134H01 gene [Source:MGI Symbol;Acc:MGI:3588250]
35. Gm7584 ENSMUSG00000093537 3 1 - 1.000 - - - - predicted gene 7584 [Source:MGI Symbol;Acc:MGI:3647027]
36. Gm13151 Gm13151 9 1 - - - - - 1.000
37. 1810063I02Rik ENSMUSG00000085551 4 1 - - - - - 1.000 RIKEN cDNA 1810063I02 gene [Source:MGI Symbol;Acc:MGI:1917104]
38. Gm12357 Gm12357 0 1 - - - - - 1.000
39. Scarna2 ENSMUSG00000088185 6 1 1.000 - - - - - small Cajal body-specific RNA 2 [Source:MGI Symbol;Acc:MGI:3819484]
40. Gm17028 ENSMUSG00000090638 1 1 1.000 - - - - - predicted gene 17028 [Source:MGI Symbol;Acc:MGI:4937855]
41. 4930426L09Rik ENSMUSG00000026736 4 1 - - - - - 1.000 RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
42. Gm15794 ENSMUSG00000084108 0 1 - - - - - 1.000 predicted gene 15794 [Source:MGI Symbol;Acc:MGI:3783236]
43. Tex11 ENSMUSG00000009670 2 1 - - - - - 1.000 testis expressed gene 11 [Source:MGI Symbol;Acc:MGI:1933237]
44. Gm25197 ENSMUSG00000095943 3 1 1.000 - - - - - predicted gene, 25197 [Source:MGI Symbol;Acc:MGI:5454974]
45. C1qtnf9 ENSMUSG00000071347 6 1 1.000 - - - - - C1q and tumor necrosis factor related protein 9 [Source:MGI Symbol;Acc:MGI:3045252]
46. Gm17566 Gm17566 24 1 - 1.000 - - - -
47. Dusp15 ENSMUSG00000042662 21 1 1.000 - - - - - dual specificity phosphatase-like 15 [Source:MGI Symbol;Acc:MGI:1934928]
48. Hoxd11 ENSMUSG00000042499 16 1 - - - - - 1.000 homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
49. Tuba3a ENSMUSG00000067702 2 1 - 1.000 - - - - tubulin, alpha 3A [Source:MGI Symbol;Acc:MGI:1095406]
50. Gm5446 ENSMUSG00000050243 19 1 - - - - - 1.000 predicted gene 5446 [Source:MGI Symbol;Acc:MGI:3644854]
51. 1700028E10Rik ENSMUSG00000097321 1 1 - - - - - 1.000 RIKEN cDNA 1700028E10 gene [Source:MGI Symbol;Acc:MGI:1916713]
52. Iqcg ENSMUSG00000035578 15 1 - - - - - 1.000 IQ motif containing G [Source:MGI Symbol;Acc:MGI:1916957]
53. Gm26484 ENSMUSG00000088643 2 1 - - - - - 1.000 predicted gene, 26484 [Source:MGI Symbol;Acc:MGI:5456261]
54. 4933427G17Rik 2 1 - - - - - 1.000 RIKEN cDNA 4933427G17 gene, transcript variant X2
55. Cabyr ENSMUSG00000024430 7 1 1.000 - - - - - calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) [Source:MGI Symbol;Acc:MGI:1918382]
56. Irs3 ENSMUSG00000047182 11 1 - - - - - 1.000 insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
57. Gm15705 Gm15705 2 1 - - - - - 1.000
58. Gm14310 Gm14310 1 1 1.000 - - - - -
59. Hr ENSMUSG00000022096 11 1 - - - - - 1.000 hairless [Source:MGI Symbol;Acc:MGI:96223]
60. Itih4 ENSMUSG00000021922 7 1 - - - - - 1.000 inter alpha-trypsin inhibitor, heavy chain 4 [Source:MGI Symbol;Acc:MGI:109536]
61. Gm14379 ENSMUSG00000087252 1 1 - - - - - 1.000 predicted gene 14379 [Source:MGI Symbol;Acc:MGI:3649346]
62. Gm17196 ENSMUSG00000090708 11 1 - 1.000 - - - - predicted gene 17196 [Source:MGI Symbol;Acc:MGI:4938023]
63. Ttc21a ENSMUSG00000032514 1 1 - - - - - 1.000 tetratricopeptide repeat domain 21A [Source:MGI Symbol;Acc:MGI:1921302]
64. Cpvl ENSMUSG00000052955 2 1 - 1.000 - - - - carboxypeptidase, vitellogenic-like [Source:MGI Symbol;Acc:MGI:1918537]
65. Gm13634 Gm13634 10 1 - 1.000 - - - -
66. Gm14243 ENSMUSG00000067745 1 1 - 1.000 - - - - predicted gene 14243 [Source:MGI Symbol;Acc:MGI:3651252]
67. 4930591A17Rik ENSMUSG00000039138 1 1 - - - - - 1.000 RIKEN cDNA 4930591A17 gene [Source:MGI Symbol;Acc:MGI:1915425]
68. Adam1a ENSMUSG00000072647 1 1 1.000 - - - - - a disintegrin and metallopeptidase domain 1a [Source:MGI Symbol;Acc:MGI:2429504]
69. Tchhl1 ENSMUSG00000027908 1 1 1.000 - - - - - trichohyalin-like 1 [Source:MGI Symbol;Acc:MGI:1918575]
70. 1700064E03Rik 1700064E03Rik 8 1 - - - - - 1.000
71. Cd160 ENSMUSG00000038304 1 1 - - - - - 1.000 CD160 antigen [Source:MGI Symbol;Acc:MGI:1860383]
72. Gm11464 ENSMUSG00000087351 13 1 - - - - - 1.000 predicted gene 11464 [Source:MGI Symbol;Acc:MGI:3650572]
73. Gm9 ENSMUSG00000073243 2 1 - - - - - 1.000 predicted gene 9 [Source:MGI Symbol;Acc:MGI:2684855]
74. Slc6a18 ENSMUSG00000021612 3 1 - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter), member 18 [Source:MGI Symbol;Acc:MGI:1336892]
75. 1600014K23Rik 1600014K23Rik 0 1 - - - - - 1.000
76. Cldn26 Cldn26 7 1 1.000 - - - - -
77. Pklr ENSMUSG00000041237 3 1 - - - - - 1.000 pyruvate kinase liver and red blood cell [Source:MGI Symbol;Acc:MGI:97604]
78. Cst8 ENSMUSG00000027442 4 1 - - - - - 1.000 cystatin 8 (cystatin-related epididymal spermatogenic) [Source:MGI Symbol;Acc:MGI:107161]
79. Defb25 ENSMUSG00000074678 5 1 1.000 - - - - - defensin beta 25 [Source:MGI Symbol;Acc:MGI:3651158]
80. Khdc1a ENSMUSG00000067750 3 1 - - - - - 1.000 KH domain containing 1A [Source:MGI Symbol;Acc:MGI:2676610]
81. Cpb1 ENSMUSG00000011463 3 1 - - - - - 1.000 carboxypeptidase B1 (tissue) [Source:MGI Symbol;Acc:MGI:1923953]
82. Gm15587 ENSMUSG00000086769 0 1 - - - - - 1.000 predicted gene 15587 [Source:MGI Symbol;Acc:MGI:3783035]
83. Pth2r ENSMUSG00000025946 5 1 - 1.000 - - - - parathyroid hormone 2 receptor [Source:MGI Symbol;Acc:MGI:2180917]
84. Trpc7 ENSMUSG00000021541 3 1 - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 7 [Source:MGI Symbol;Acc:MGI:1349470]
85. Gm26384 ENSMUSG00000076137 3 1 - - - - - 1.000 predicted gene, 26384 [Source:MGI Symbol;Acc:MGI:5456161]
86. Cep85l ENSMUSG00000038594 51 1 - - - - - 1.000 centrosomal protein 85-like [Source:MGI Symbol;Acc:MGI:3642684]
87. Gm16027 ENSMUSG00000090041 1 1 1.000 - - - - - predicted gene 16027 [Source:MGI Symbol;Acc:MGI:3801732]
88. 5530401N12Rik 5530401N12Rik 5 1 - - - - - 1.000
89. Il24 ENSMUSG00000026420 1 1 1.000 - - - - - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
90. Gm8165 ENSMUSG00000093968 1 1 - 1.000 - - - - predicted gene 8165 [Source:MGI Symbol;Acc:MGI:3648126]
91. A230050P20Rik ENSMUSG00000038884 10 1 - - - - - 1.000 RIKEN cDNA A230050P20 gene [Source:MGI Symbol;Acc:MGI:2441788]
92. Gm20539 ENSMUSG00000092353 1 1 1.000 - - - - - predicted gene 20539 [Source:MGI Symbol;Acc:MGI:5142004]
93. Gm7507 ENSMUSG00000098142 3 1 - 1.000 - - - - predicted gene 7507 [Source:MGI Symbol;Acc:MGI:3643248]
94. Rab42 ENSMUSG00000089687 6 1 1.000 - - - - - RAB42, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2441753]
95. Ifi27l2a ENSMUSG00000079017 5 1 1.000 - - - - - interferon, alpha-inducible protein 27 like 2A [Source:MGI Symbol;Acc:MGI:1924183]
96. Gm10224 ENSMUSG00000080932 30 1 - - - - - 1.000 predicted pseudogene 10224 [Source:MGI Symbol;Acc:MGI:3642708]
97. Crct1 ENSMUSG00000027913 9 1 1.000 - - - - - cysteine-rich C-terminal 1 [Source:MGI Symbol;Acc:MGI:1921425]
98. 1700122E12Rik ENSMUSG00000087685 6 1 1.000 - - - - - RIKEN cDNA 1700122E12 gene [Source:MGI Symbol;Acc:MGI:1920869]
99. Gm26805 ENSMUSG00000097268 14 1 - 1.000 - - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
100. Gm6526 ENSMUSG00000091698 1 1 - - - - - 1.000 predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA