Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdv3

Gene Name Gene ID Reads Annotation
Cdv3 ENSMUSG00000032803 17359 carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759]







Genes with expression patterns similar to Cdv3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdv3 ENSMUSG00000032803 17359 6 1.000 1.000 1.000 1.000 1.000 1.000 carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759]
2. Clp1 ENSMUSG00000027079 3327 1.429 0.718 0.711 - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
3. 2010003O02Rik 2010003O02Rik 2896 1.426 0.718 0.708 - - - -
4. Stag2 ENSMUSG00000025862 3862 1.413 0.704 0.709 - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
5. Foxc1 ENSMUSG00000050295 5789 0.903 0.903 - - - - - forkhead box C1 [Source:MGI Symbol;Acc:MGI:1347466]
6. Unc119b ENSMUSG00000046562 2967 0.894 0.894 - - - - - unc-119 lipid binding chaperone B [Source:MGI Symbol;Acc:MGI:2147162]
7. Rps9 ENSMUSG00000006333 39918 0.834 0.834 - - - - - ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1924096]
8. Gtf2h5 ENSMUSG00000034345 6035 0.789 - 0.789 - - - - general transcription factor IIH, polypeptide 5 [Source:MGI Symbol;Acc:MGI:107227]
9. Top2a ENSMUSG00000020914 30252 0.787 - 0.787 - - - - topoisomerase (DNA) II alpha [Source:MGI Symbol;Acc:MGI:98790]
10. Arf4 ENSMUSG00000021877, ENSMUSG00000115861 8580 0.785 - 0.785 - - - - ADP-ribosylation factor 4 [Source:MGI Symbol;Acc:MGI:99433]
11. Spsb4 ENSMUSG00000046997 5432 0.785 - 0.785 - - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
12. Ccdc50 ENSMUSG00000038127 6532 0.773 - 0.773 - - - - coiled-coil domain containing 50 [Source:MGI Symbol;Acc:MGI:1914751]
13. Tead2 ENSMUSG00000030796 19439 0.773 0.773 - - - - - TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
14. Prdx1 ENSMUSG00000028691 28315 0.773 0.773 - - - - - peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
15. Atp5a1 ENSMUSG00000025428, ENSMUSG00000116276 22984 0.762 - 0.762 - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 [Source:MGI Symbol;Acc:MGI:88115]
16. Hoxc8 ENSMUSG00000001657 16443 0.757 0.757 - - - - - homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
17. Cct2 ENSMUSG00000034024 13966 0.755 - 0.755 - - - - chaperonin containing Tcp1, subunit 2 (beta) [Source:MGI Symbol;Acc:MGI:107186]
18. Afg3l2 ENSMUSG00000024527 3339 0.752 - 0.752 - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
19. Ppp1cc ENSMUSG00000004455 7445 0.749 - 0.749 - - - - protein phosphatase 1 catalytic subunit gamma [Source:MGI Symbol;Acc:MGI:104872]
20. Seh1l ENSMUSG00000079614 7707 0.745 - 0.745 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
21. Cnep1r1 ENSMUSG00000036810 2112 0.743 - 0.743 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:MGI Symbol;Acc:MGI:1921981]
22. Tsen34 ENSMUSG00000035585 8094 0.742 - 0.742 - - - - tRNA splicing endonuclease subunit 34 [Source:MGI Symbol;Acc:MGI:1913328]
23. Zfhx4 ENSMUSG00000025255 6456 0.741 - 0.741 - - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
24. Prmt5 ENSMUSG00000023110 3788 0.74 - 0.740 - - - - protein arginine N-methyltransferase 5 [Source:MGI Symbol;Acc:MGI:1351645]
25. Hspe1 ENSMUSG00000073676 30239 0.739 0.739 - - - - - heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680]
26. Puf60 ENSMUSG00000002524 11932 0.735 - 0.735 - - - - poly-U binding splicing factor 60 [Source:MGI Symbol;Acc:MGI:1915209]
27. Gm9892 ENSMUSG00000052825 6048 0.734 - 0.734 - - - - predicted gene 9892 [Source:MGI Symbol;Acc:MGI:3701610]
28. Larp1 ENSMUSG00000037331 9214 0.731 - 0.731 - - - - La ribonucleoprotein domain family, member 1 [Source:MGI Symbol;Acc:MGI:1890165]
29. Zfp706 ENSMUSG00000062397 10503 0.73 - 0.730 - - - - zinc finger protein 706 [Source:MGI Symbol;Acc:MGI:1915286]
30. Rif1 ENSMUSG00000036202 4921 0.729 - 0.729 - - - - replication timing regulatory factor 1 [Source:MGI Symbol;Acc:MGI:1098622]
31. 2610524H06Rik ENSMUSG00000092486 3935 0.726 - 0.726 - - - - RIKEN cDNA 2610524H06 gene [Source:MGI Symbol;Acc:MGI:2447819]
32. Zmpste24 ENSMUSG00000043207 2857 0.724 0.724 - - - - - zinc metallopeptidase, STE24 [Source:MGI Symbol;Acc:MGI:1890508]
33. Med8 ENSMUSG00000006392 1655 0.721 0.721 - - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
34. 2310061I04Rik ENSMUSG00000050705 1463 0.721 0.721 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
35. Ccdc174 ENSMUSG00000034083 1439 0.721 0.721 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
36. Ctsl ENSMUSG00000021477 3529 0.72 0.720 - - - - - cathepsin L [Source:MGI Symbol;Acc:MGI:88564]
37. Yod1 ENSMUSG00000046404 793 0.72 0.720 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
38. Upf1 ENSMUSG00000058301 1982 0.72 0.720 - - - - - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
39. Tlk2 ENSMUSG00000020694 2900 0.72 - 0.720 - - - - tousled-like kinase 2 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1346023]
40. Zfp574 ENSMUSG00000045252 1410 0.72 0.720 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
41. Lrrc42 ENSMUSG00000028617 1235 0.72 0.720 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
42. Cenpl ENSMUSG00000026708 1567 0.72 0.720 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
43. Rprm ENSMUSG00000075334 1010 0.72 0.720 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
44. Pno1 ENSMUSG00000020116 5621 0.72 0.720 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
45. Dqx1 ENSMUSG00000009145 545 0.72 0.720 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
46. Lmna ENSMUSG00000028063 622 0.719 0.719 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
47. Cenpm ENSMUSG00000068101 2118 0.719 0.719 - - - - - centromere protein M [Source:MGI Symbol;Acc:MGI:1913820]
48. Mettl15 ENSMUSG00000057234 379 0.719 0.719 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
49. Ebf4 ENSMUSG00000053552 463 0.719 0.719 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
50. Ucp2 ENSMUSG00000033685 2664 0.719 0.719 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
51. Gm6483 ENSMUSG00000087153 1875 0.719 0.719 - - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
52. Tmem8 ENSMUSG00000024180 228 0.719 0.719 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
53. Ly75 ENSMUSG00000026980 766 0.719 0.719 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
54. Lnx2 ENSMUSG00000016520 439 0.719 0.719 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
55. Gm12521 Gm12521 210 0.719 0.719 - - - - -
56. Dpep1 ENSMUSG00000019278 422 0.719 0.719 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
57. Hdac9 ENSMUSG00000004698 287 0.719 0.719 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
58. Adam15 ENSMUSG00000028041 630 0.719 0.719 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
59. Epb4.1l4a Epb4.1l4a 1817 0.719 0.719 - - - - -
60. Kdm4b ENSMUSG00000024201 1440 0.718 0.718 - - - - - lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
61. Cnot11 ENSMUSG00000003135 1391 0.718 0.718 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
62. Gm16089 ENSMUSG00000081228 1617 0.718 0.718 - - - - - predicted gene 16089 [Source:MGI Symbol;Acc:MGI:3801884]
63. Gm13680 ENSMUSG00000081400 447 0.718 0.718 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
64. Gm10177 ENSMUSG00000090136 864 0.718 0.718 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
65. Nlrx1 ENSMUSG00000032109 363 0.718 0.718 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
66. H1f0 ENSMUSG00000096210 6629 0.718 0.718 - - - - - H1 histone family, member 0 [Source:MGI Symbol;Acc:MGI:95893]
67. Ccdc166 ENSMUSG00000098176 524 0.718 0.718 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
68. Fsd1 ENSMUSG00000011589 902 0.718 0.718 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
69. Nit2 ENSMUSG00000022751 895 0.718 0.718 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
70. Stk3 ENSMUSG00000022329 1332 0.717 0.717 - - - - - serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:1928487]
71. Fam160b1 ENSMUSG00000033478 2187 0.717 0.717 - - - - - family with sequence similarity 160, member B1 [Source:MGI Symbol;Acc:MGI:2147545]
72. Cwc27 ENSMUSG00000021715 899 0.717 0.717 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
73. Sppl2a ENSMUSG00000027366 1802 0.717 0.717 - - - - - signal peptide peptidase like 2A [Source:MGI Symbol;Acc:MGI:1913802]
74. Cep68 ENSMUSG00000044066 1055 0.717 0.717 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
75. Kansl1 ENSMUSG00000018412 2084 0.716 0.716 - - - - - KAT8 regulatory NSL complex subunit 1 [Source:MGI Symbol;Acc:MGI:1923969]
76. Zzef1 ENSMUSG00000055670 953 0.716 0.716 - - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
77. Nek9 ENSMUSG00000034290 2314 0.716 0.716 - - - - - NIMA (never in mitosis gene a)-related expressed kinase 9 [Source:MGI Symbol;Acc:MGI:2387995]
78. Haus8 ENSMUSG00000035439 1485 0.716 0.716 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
79. Nhlrc2 ENSMUSG00000025078 1180 0.716 0.716 - - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
80. Sh3gl3 ENSMUSG00000030638 2388 0.715 0.715 - - - - - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
81. Hipk1 ENSMUSG00000008730 2363 0.715 0.715 - - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
82. Stau1 ENSMUSG00000039536 3392 0.715 0.715 - - - - - staufen double-stranded RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1338864]
83. Chuk ENSMUSG00000025199 1732 0.715 0.715 - - - - - conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
84. AI846148 3356 0.714 0.714 - - - - - expressed sequence AI846148, transcript variant X2
85. Nusap1 ENSMUSG00000027306 2962 0.714 0.714 - - - - - nucleolar and spindle associated protein 1 [Source:MGI Symbol;Acc:MGI:2675669]
86. Gatad1 ENSMUSG00000007415 3350 0.714 0.714 - - - - - GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460]
87. Sgol1 1886 0.713 0.713 - - - - - shugoshin-like 1 (S. pombe), transcript variant X2
88. Poldip2 ENSMUSG00000001100 3214 0.713 0.713 - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915061]
89. Arhgef6 ENSMUSG00000031133 320 0.712 0.712 - - - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
90. Ets1 ENSMUSG00000032035 1513 0.712 0.712 - - - - - E26 avian leukemia oncogene 1, 5' domain [Source:MGI Symbol;Acc:MGI:95455]
91. Zkscan8 ENSMUSG00000063894 1669 0.712 0.712 - - - - - zinc finger with KRAB and SCAN domains 8 [Source:MGI Symbol;Acc:MGI:1913815]
92. Lrrc1 ENSMUSG00000032352 1281 0.712 0.712 - - - - - leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]
93. Rhot1 ENSMUSG00000017686 4099 0.712 0.712 - - - - - ras homolog family member T1 [Source:MGI Symbol;Acc:MGI:1926078]
94. Vapa ENSMUSG00000024091 5081 0.711 0.711 - - - - - vesicle-associated membrane protein, associated protein A [Source:MGI Symbol;Acc:MGI:1353561]
95. Bub1 ENSMUSG00000027379 1882 0.711 0.711 - - - - - BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
96. 1110001J03Rik 2404 0.711 0.711 - - - - - RIKEN cDNA 1110001J03 gene
97. Mbnl2 ENSMUSG00000022139 3296 0.711 0.711 - - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
98. AW549877 ENSMUSG00000041935 2924 0.71 0.710 - - - - - expressed sequence AW549877 [Source:MGI Symbol;Acc:MGI:2146232]
99. Txndc17 ENSMUSG00000020803 3761 0.71 0.710 - - - - - thioredoxin domain containing 17 [Source:MGI Symbol;Acc:MGI:1289248]
100. Mar-05 Mar-05 5896 0.71 0.710 - - - - -

There are 27 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA