Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cdk5r2

Gene Name Gene ID Reads Annotation
Cdk5r2 ENSMUSG00000090071 67 cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]







Genes with expression patterns similar to Cdk5r2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdk5r2 ENSMUSG00000090071 67 6 1.000 1.000 1.000 1.000 1.000 1.000 cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
2. Lect1 122 1.602 - - 0.870 - - 0.732 leukocyte cell derived chemotaxin 1, transcript variant X3
3. Sox3 ENSMUSG00000045179 1137 1.561 0.713 - 0.848 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
4. Dcc ENSMUSG00000060534 107 1.503 - - 0.801 0.702 - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
5. Gpr98 Gpr98 1797 1.501 0.718 - 0.783 - - -
6. Scube2 ENSMUSG00000007279 406 1.453 0.703 - 0.750 - - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
7. Phyhipl ENSMUSG00000037747 636 0.908 - - 0.908 - - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
8. 0610040B09Rik 0610040B09Rik 333 0.879 - - 0.879 - - -
9. Gm20501 ENSMUSG00000092536 57 0.875 - - 0.875 - - - predicted gene 20501 [Source:MGI Symbol;Acc:MGI:5141966]
10. Rfx4 ENSMUSG00000020037 455 0.843 - - 0.843 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
11. Trp53i11 ENSMUSG00000068735 15944 0.807 - - 0.807 - - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
12. Scrt1 ENSMUSG00000048385 155 0.803 - - 0.803 - - - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
13. Phf21b ENSMUSG00000016624 849 0.8 - - 0.800 - - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
14. Ccdc177 ENSMUSG00000062961 159 0.799 - - 0.799 - - - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
15. Ptprz1 ENSMUSG00000068748 159 0.794 - - 0.794 - - - protein tyrosine phosphatase, receptor type Z, polypeptide 1 [Source:MGI Symbol;Acc:MGI:97816]
16. Robo3 ENSMUSG00000032128 389 0.788 - - 0.788 - - - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
17. Apod ENSMUSG00000022548 89 0.787 - - 0.787 - - - apolipoprotein D [Source:MGI Symbol;Acc:MGI:88056]
18. Ckb ENSMUSG00000001270 8443 0.786 - - 0.786 - - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
19. Bhlhe23 ENSMUSG00000045493 61 0.784 - - 0.784 - - - basic helix-loop-helix family, member e23 [Source:MGI Symbol;Acc:MGI:2153710]
20. B3gat1 ENSMUSG00000045994 72 0.784 - - 0.784 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) [Source:MGI Symbol;Acc:MGI:1924148]
21. Lbx1 ENSMUSG00000025216 160 0.78 - - 0.780 - - - ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]
22. Ppm1e ENSMUSG00000046442 270 0.777 - - 0.777 - - - protein phosphatase 1E (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2444096]
23. Elavl3 ENSMUSG00000003410 2830 0.774 - - 0.774 - - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
24. Ppp1r14a ENSMUSG00000037166 745 0.77 - - 0.770 - - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
25. Msi1 ENSMUSG00000054256 13785 0.767 - - 0.767 - - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
26. Crabp2 ENSMUSG00000004885 6976 0.767 - - 0.767 - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
27. Fez1 ENSMUSG00000032118 2537 0.767 - - 0.767 - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
28. Neurog1 ENSMUSG00000048904 327 0.764 - - - - - 0.764 neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
29. D030055H07Rik ENSMUSG00000086296 161 0.763 0.763 - - - - - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
30. Celsr2 ENSMUSG00000068740 2010 0.759 - - 0.759 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
31. Ap3b2 ENSMUSG00000062444 565 0.759 - - 0.759 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
32. Tmem163 ENSMUSG00000026347 282 0.756 - - - 0.756 - - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
33. Cotl1 ENSMUSG00000031827 4560 0.754 - - 0.754 - - - coactosin-like 1 (Dictyostelium) [Source:MGI Symbol;Acc:MGI:1919292]
34. Pax7 ENSMUSG00000028736 356 0.754 - - 0.754 - - - paired box 7 [Source:MGI Symbol;Acc:MGI:97491]
35. Enc1 ENSMUSG00000041773 2185 0.752 - - 0.752 - - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
36. Klhl35 ENSMUSG00000035298 106 0.752 - - 0.752 - - - kelch-like 35 [Source:MGI Symbol;Acc:MGI:1919434]
37. Lhx5 ENSMUSG00000029595 102 0.749 - - 0.749 - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
38. Nes ENSMUSG00000004891 8017 0.747 - - 0.747 - - - nestin [Source:MGI Symbol;Acc:MGI:101784]
39. Lamp5 ENSMUSG00000027270 112 0.747 - - 0.747 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
40. Klhl1 ENSMUSG00000022076 8 0.747 - - 0.747 - - - kelch-like 1 [Source:MGI Symbol;Acc:MGI:2136335]
41. Pou4f3 ENSMUSG00000024497 58 0.746 - - 0.746 - - - POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
42. Wnt7b ENSMUSG00000022382 367 0.745 - - 0.745 - - - wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
43. Ucma ENSMUSG00000026668 7 0.745 - - - - 0.745 - upper zone of growth plate and cartilage matrix associated [Source:MGI Symbol;Acc:MGI:1915777]
44. Ncan ENSMUSG00000002341 521 0.744 - - 0.744 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
45. Gm11647 Gm11647 13 0.743 - - - 0.743 - -
46. Gm6733 ENSMUSG00000084329 8 0.743 - - - 0.743 - - predicted gene 6733 [Source:MGI Symbol;Acc:MGI:3645402]
47. Tubb2b ENSMUSG00000045136 41060 0.741 - - 0.741 - - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
48. Ptprn2 ENSMUSG00000056553 489 0.741 - - 0.741 - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
49. Thrb ENSMUSG00000021779 15 0.736 0.736 - - - - - thyroid hormone receptor beta [Source:MGI Symbol;Acc:MGI:98743]
50. A930009A15Rik ENSMUSG00000092210 2 0.736 0.736 - - - - - RIKEN cDNA A930009A15 gene [Source:MGI Symbol;Acc:MGI:1925048]
51. Srrm4 ENSMUSG00000063919 190 0.735 - - - - 0.735 - serine/arginine repetitive matrix 4 [Source:MGI Symbol;Acc:MGI:1916205]
52. Atl1 ENSMUSG00000021066 485 0.735 - - 0.735 - - - atlastin GTPase 1 [Source:MGI Symbol;Acc:MGI:1921241]
53. Srgap3 ENSMUSG00000030257 2941 0.734 - - 0.734 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
54. Nrarp ENSMUSG00000078202 1708 0.733 - - 0.733 - - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
55. Nacad ENSMUSG00000041073 114 0.732 - - 0.732 - - - NAC alpha domain containing [Source:MGI Symbol;Acc:MGI:3603030]
56. Zfp366 ENSMUSG00000050919 2 0.732 - - - - 0.732 - zinc finger protein 366 [Source:MGI Symbol;Acc:MGI:2178429]
57. A430057M04Rik ENSMUSG00000090564 3 0.732 - - - - 0.732 - RIKEN cDNA A430057M04 gene [Source:MGI Symbol;Acc:MGI:2442125]
58. Otp ENSMUSG00000021685 170 0.732 - - - - 0.732 - orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
59. 1700003E16Rik ENSMUSG00000030030 2 0.732 - - - - 0.732 - RIKEN cDNA 1700003E16 gene [Source:MGI Symbol;Acc:MGI:1919087]
60. Gm4221 ENSMUSG00000096948 9 0.732 - - - - 0.732 - predicted gene 4221 [Source:MGI Symbol;Acc:MGI:3782397]
61. Gm12020 ENSMUSG00000081302 15 0.732 - - - - 0.732 - predicted gene 12020 [Source:MGI Symbol;Acc:MGI:3650978]
62. Gm6802 ENSMUSG00000059229 10 0.732 - - - - 0.732 - predicted gene 6802 [Source:MGI Symbol;Acc:MGI:3646076]
63. 1810010K12Rik ENSMUSG00000056329 8 0.732 - - - - 0.732 - RIKEN cDNA 1810010K12 gene [Source:MGI Symbol;Acc:MGI:1921419]
64. Gm14275 ENSMUSG00000085949 4 0.732 - - - - 0.732 - predicted gene 14275 [Source:MGI Symbol;Acc:MGI:3649537]
65. 9530080O11Rik ENSMUSG00000044125 2 0.732 - - - - 0.732 - RIKEN cDNA 9530080O11 gene [Source:MGI Symbol;Acc:MGI:2441751]
66. Rps2-ps4 ENSMUSG00000084373 7 0.732 - - - - 0.732 - ribosomal protein S2, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3651115]
67. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 0.732 - - - - 0.732 - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
68. Gm13010 ENSMUSG00000086845 3 0.732 - - - - 0.732 - predicted gene 13010 [Source:MGI Symbol;Acc:MGI:3651180]
69. Gpr171 ENSMUSG00000050075 22 0.732 - - - - 0.732 - G protein-coupled receptor 171 [Source:MGI Symbol;Acc:MGI:2442043]
70. 9030624G23Rik ENSMUSG00000073158 5 0.732 - - - - 0.732 - RIKEN cDNA 9030624G23 gene [Source:MGI Symbol;Acc:MGI:1914058]
71. Gm11769 ENSMUSG00000085636 3 0.732 - - - - 0.732 - predicted gene 11769 [Source:MGI Symbol;Acc:MGI:3702101]
72. Bmp3 ENSMUSG00000029335 15 0.732 - - - - 0.732 - bone morphogenetic protein 3 [Source:MGI Symbol;Acc:MGI:88179]
73. Hoxc9 ENSMUSG00000036139 4145 0.731 - - 0.731 - - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
74. Ptf1a ENSMUSG00000026735 35 0.731 - 0.731 - - - - pancreas specific transcription factor, 1a [Source:MGI Symbol;Acc:MGI:1328312]
75. Grm2 ENSMUSG00000023192 147 0.728 - - 0.728 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
76. Pcsk1 ENSMUSG00000021587 20 0.727 - - - - - 0.727 proprotein convertase subtilisin/kexin type 1 [Source:MGI Symbol;Acc:MGI:97511]
77. Zic3 ENSMUSG00000067860 549 0.726 0.726 - - - - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
78. Lamc3 ENSMUSG00000026840 198 0.725 - - 0.725 - - - laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]
79. Rhbdl3 ENSMUSG00000017692 783 0.725 - - 0.725 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
80. Rbfox3 ENSMUSG00000025576 384 0.724 - - 0.724 - - - RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
81. Psat1 ENSMUSG00000024640 15774 0.723 - - 0.723 - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]
82. RP24-312G4.2 RP24-312G4.2 350 0.723 - - 0.723 - - -
83. Ppp1r1a ENSMUSG00000022490 236 0.721 0.721 - - - - - protein phosphatase 1, regulatory inhibitor subunit 1A [Source:MGI Symbol;Acc:MGI:1889595]
84. Trpm6 ENSMUSG00000024727 19 0.721 - - 0.721 - - - transient receptor potential cation channel, subfamily M, member 6 [Source:MGI Symbol;Acc:MGI:2675603]
85. Sox21 ENSMUSG00000061517 464 0.72 - - 0.720 - - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
86. Pcdh8 ENSMUSG00000036422 452 0.72 - - 0.720 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
87. Pou3f3 ENSMUSG00000045515 5137 0.72 - - 0.720 - - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
88. Gng3 ENSMUSG00000071658 2104 0.72 - - - - - 0.720 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
89. Mycl ENSMUSG00000028654 904 0.72 - - 0.720 - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
90. RP24-113D21.1 RP24-113D21.1 685 0.72 - - - - - 0.720
91. Gm24959 ENSMUSG00000088549 28 0.72 - - - - 0.720 - predicted gene, 24959 [Source:MGI Symbol;Acc:MGI:5454736]
92. Atoh1 ENSMUSG00000073043 396 0.719 - - - 0.719 - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
93. Dock3 ENSMUSG00000039716 66 0.719 - - 0.719 - - - dedicator of cyto-kinesis 3 [Source:MGI Symbol;Acc:MGI:2429763]
94. Wnt7a ENSMUSG00000030093 126 0.718 - - 0.718 - - - wingless-type MMTV integration site family, member 7A [Source:MGI Symbol;Acc:MGI:98961]
95. Dll3 ENSMUSG00000003436 1086 0.718 - - - 0.718 - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
96. Sox1 ENSMUSG00000096014 349 0.717 - - 0.717 - - - SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
97. Syt11 ENSMUSG00000068923 7491 0.715 - - 0.715 - - - synaptotagmin XI [Source:MGI Symbol;Acc:MGI:1859547]
98. Hes3 ENSMUSG00000028946 73 0.714 - - 0.714 - - - hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
99. Cidea ENSMUSG00000024526 20 0.714 - - - - 0.714 - cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Source:MGI Symbol;Acc:MGI:1270845]
100. Bhlhe22 ENSMUSG00000025128 194 0.714 - - 0.714 - - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]

There are 16 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA