Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ccni

Gene Name Gene ID Reads Annotation
Ccni ENSMUSG00000063015 12922 cyclin I [Source:MGI Symbol;Acc:MGI:1341077]







Genes with expression patterns similar to Ccni

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ccni ENSMUSG00000063015 12922 6 1.000 1.000 1.000 1.000 1.000 1.000 cyclin I [Source:MGI Symbol;Acc:MGI:1341077]
2. Ccdc34 ENSMUSG00000027160 5334 1.6 0.895 0.705 - - - - coiled-coil domain containing 34 [Source:MGI Symbol;Acc:MGI:1915451]
3. Gm9385 ENSMUSG00000080848 4881 0.942 0.942 - - - - - predicted pseudogene 9385 [Source:MGI Symbol;Acc:MGI:3646182]
4. Rian ENSMUSG00000097451, ENSMUSG00000107391 6847 0.915 0.915 - - - - - RNA imprinted and accumulated in nucleus [Source:MGI Symbol;Acc:MGI:1922995]
5. Mfap3 ENSMUSG00000020522 5793 0.9 0.900 - - - - - microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
6. Tbc1d16 ENSMUSG00000039976 4754 0.9 0.900 - - - - - TBC1 domain family, member 16 [Source:MGI Symbol;Acc:MGI:2652878]
7. Slc2a3 ENSMUSG00000003153 5785 0.898 0.898 - - - - - solute carrier family 2 (facilitated glucose transporter), member 3 [Source:MGI Symbol;Acc:MGI:95757]
8. Rcl1 ENSMUSG00000024785 1676 0.898 0.898 - - - - - RNA terminal phosphate cyclase-like 1 [Source:MGI Symbol;Acc:MGI:1913275]
9. Luzp1 ENSMUSG00000001089 2070 0.897 0.897 - - - - - leucine zipper protein 1 [Source:MGI Symbol;Acc:MGI:107629]
10. Dctn1 ENSMUSG00000031865 11800 0.897 0.897 - - - - - dynactin 1 [Source:MGI Symbol;Acc:MGI:107745]
11. Sdr39u1 ENSMUSG00000022223 4051 0.897 0.897 - - - - - short chain dehydrogenase/reductase family 39U, member 1 [Source:MGI Symbol;Acc:MGI:1916876]
12. Picalm ENSMUSG00000039361 3646 0.897 0.897 - - - - - phosphatidylinositol binding clathrin assembly protein [Source:MGI Symbol;Acc:MGI:2385902]
13. Rgs12 ENSMUSG00000029101 3712 0.896 0.896 - - - - - regulator of G-protein signaling 12 [Source:MGI Symbol;Acc:MGI:1918979]
14. Bcl2l12 ENSMUSG00000003190 2295 0.896 0.896 - - - - - BCL2-like 12 (proline rich) [Source:MGI Symbol;Acc:MGI:1922986]
15. Abhd17c ENSMUSG00000038459 2034 0.896 0.896 - - - - - abhydrolase domain containing 17C [Source:MGI Symbol;Acc:MGI:1917428]
16. Aars ENSMUSG00000031960 9515 0.896 0.896 - - - - - alanyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2384560]
17. Plec ENSMUSG00000022565 2555 0.895 0.895 - - - - - plectin [Source:MGI Symbol;Acc:MGI:1277961]
18. Pmepa1 ENSMUSG00000038400 1294 0.895 0.895 - - - - - prostate transmembrane protein, androgen induced 1 [Source:MGI Symbol;Acc:MGI:1929600]
19. Snx10 ENSMUSG00000038301 2115 0.895 0.895 - - - - - sorting nexin 10 [Source:MGI Symbol;Acc:MGI:1919232]
20. Mrpl9 ENSMUSG00000028140 1835 0.895 0.895 - - - - - mitochondrial ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:2137211]
21. Egln2 ENSMUSG00000058709 2852 0.895 0.895 - - - - - egl-9 family hypoxia-inducible factor 2 [Source:MGI Symbol;Acc:MGI:1932287]
22. Cln3 ENSMUSG00000030720 1100 0.894 0.894 - - - - - ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) [Source:MGI Symbol;Acc:MGI:107537]
23. Abcd1 ENSMUSG00000031378 696 0.893 0.893 - - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:MGI Symbol;Acc:MGI:1349215]
24. 2610008E11Rik ENSMUSG00000060301 1912 0.893 0.893 - - - - - RIKEN cDNA 2610008E11 gene [Source:MGI Symbol;Acc:MGI:1919378]
25. Wnt5a ENSMUSG00000021994 2387 0.893 0.893 - - - - - wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
26. Sgol2 Sgol2 2618 0.893 0.893 - - - - -
27. Fam192a ENSMUSG00000031774 2091 0.893 0.893 - - - - - family with sequence similarity 192, member A [Source:MGI Symbol;Acc:MGI:1919637]
28. Vps36 ENSMUSG00000031479 2501 0.893 0.893 - - - - - vacuolar protein sorting 36 [Source:MGI Symbol;Acc:MGI:1917410]
29. Taf15 ENSMUSG00000020680 2417 0.893 0.893 - - - - - TATA-box binding protein associated factor 15 [Source:MGI Symbol;Acc:MGI:1917689]
30. Chd7 ENSMUSG00000041235 7625 0.893 0.893 - - - - - chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
31. Tpd52 ENSMUSG00000027506 1885 0.893 0.893 - - - - - tumor protein D52 [Source:MGI Symbol;Acc:MGI:107749]
32. Lsm4 ENSMUSG00000031848, ENSMUSG00000110900 4991 0.892 0.892 - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1354692]
33. Arhgef2 ENSMUSG00000028059 3179 0.892 0.892 - - - - - rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:MGI Symbol;Acc:MGI:103264]
34. Sh3bgrl ENSMUSG00000031246 3900 0.892 0.892 - - - - - SH3-binding domain glutamic acid-rich protein like [Source:MGI Symbol;Acc:MGI:1930849]
35. Irak1 ENSMUSG00000031392 3219 0.892 0.892 - - - - - interleukin-1 receptor-associated kinase 1 [Source:MGI Symbol;Acc:MGI:107420]
36. Trim8 ENSMUSG00000025034 1494 0.892 0.892 - - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
37. Zfp367 ENSMUSG00000044934 1130 0.892 0.892 - - - - - zinc finger protein 367 [Source:MGI Symbol;Acc:MGI:2442266]
38. Jam3 ENSMUSG00000031990 5781 0.892 0.892 - - - - - junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
39. Med1 ENSMUSG00000018160 2865 0.891 0.891 - - - - - mediator complex subunit 1 [Source:MGI Symbol;Acc:MGI:1100846]
40. Isca2 ENSMUSG00000021241 4922 0.891 0.891 - - - - - iron-sulfur cluster assembly 2 [Source:MGI Symbol;Acc:MGI:1921566]
41. Fam175a 970 0.891 0.891 - - - - - family with sequence similarity 175, member A, transcript variant X2
42. Pfkl ENSMUSG00000020277 2200 0.891 0.891 - - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
43. Samd4 ENSMUSG00000021838 1321 0.891 0.891 - - - - - sterile alpha motif domain containing 4 [Source:MGI Symbol;Acc:MGI:1921730]
44. Gm3244 1303 0.89 0.890 - - - - - predicted pseudogene 3244
45. Ago1 ENSMUSG00000041530 7703 0.89 0.890 - - - - - argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
46. Zfp287 ENSMUSG00000005267 876 0.89 0.890 - - - - - zinc finger protein 287 [Source:MGI Symbol;Acc:MGI:2176561]
47. Rps6ka1 ENSMUSG00000003644 1196 0.89 0.890 - - - - - ribosomal protein S6 kinase polypeptide 1 [Source:MGI Symbol;Acc:MGI:104558]
48. Dyrk3 ENSMUSG00000016526 576 0.89 0.890 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 [Source:MGI Symbol;Acc:MGI:1330300]
49. Opa1 ENSMUSG00000038084 1963 0.89 0.890 - - - - - OPA1, mitochondrial dynamin like GTPase [Source:MGI Symbol;Acc:MGI:1921393]
50. Serinc1 ENSMUSG00000019877 7383 0.89 0.890 - - - - - serine incorporator 1 [Source:MGI Symbol;Acc:MGI:1926228]
51. Chmp6 ENSMUSG00000025371 1369 0.89 0.890 - - - - - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
52. Nnt ENSMUSG00000025453, ENSMUSG00000116207 2284 0.89 0.890 - - - - - nicotinamide nucleotide transhydrogenase [Source:MGI Symbol;Acc:MGI:109279]
53. Psmd13 ENSMUSG00000025487 5365 0.89 0.890 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:MGI Symbol;Acc:MGI:1345192]
54. 0610005C13Rik ENSMUSG00000109644 478 0.889 0.889 - - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
55. Cnnm3 ENSMUSG00000001138 1820 0.889 0.889 - - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
56. Ttpal ENSMUSG00000017679 922 0.889 0.889 - - - - - tocopherol (alpha) transfer protein-like [Source:MGI Symbol;Acc:MGI:1923330]
57. Rmrp ENSMUSG00000088088 349 0.889 0.889 - - - - - RNA component of mitochondrial RNAase P [Source:MGI Symbol;Acc:MGI:97937]
58. Samsn1 ENSMUSG00000022876 406 0.889 0.889 - - - - - SAM domain, SH3 domain and nuclear localization signals, 1 [Source:MGI Symbol;Acc:MGI:1914992]
59. Mrps25 ENSMUSG00000014551 1972 0.889 0.889 - - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
60. Syt13 ENSMUSG00000027220 679 0.889 0.889 - - - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
61. Zfp850 ENSMUSG00000096916 401 0.889 0.889 - - - - - zinc finger protein 850 [Source:MGI Symbol;Acc:MGI:3036281]
62. Neurog2 ENSMUSG00000027967 670 0.889 0.889 - - - - - neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
63. Acad9 ENSMUSG00000027710 2657 0.889 0.889 - - - - - acyl-Coenzyme A dehydrogenase family, member 9 [Source:MGI Symbol;Acc:MGI:1914272]
64. Wdr60 ENSMUSG00000042050 672 0.889 0.889 - - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
65. Dlg4 ENSMUSG00000020886 393 0.889 0.889 - - - - - discs large MAGUK scaffold protein 4 [Source:MGI Symbol;Acc:MGI:1277959]
66. Bai3 Bai3 552 0.889 0.889 - - - - -
67. Chmp5 ENSMUSG00000028419 5927 0.888 0.888 - - - - - charged multivesicular body protein 5 [Source:MGI Symbol;Acc:MGI:1924209]
68. Ppp1ca ENSMUSG00000040385, ENSMUSG00000096994 15766 0.888 0.888 - - - - - protein phosphatase 1 catalytic subunit alpha [Source:MGI Symbol;Acc:MGI:103016]
69. Fez1 ENSMUSG00000032118 2537 0.888 0.888 - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
70. Arl1 ENSMUSG00000060904 5503 0.888 0.888 - - - - - ADP-ribosylation factor-like 1 [Source:MGI Symbol;Acc:MGI:99436]
71. Gm15662 Gm15662 1356 0.887 0.887 - - - - -
72. Rassf4 ENSMUSG00000042129 1399 0.887 0.887 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
73. Lamp2 ENSMUSG00000016534 3440 0.886 0.886 - - - - - lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
74. Rpl29 ENSMUSG00000048758 10651 0.886 0.886 - - - - - ribosomal protein L29 [Source:MGI Symbol;Acc:MGI:99687]
75. Vcan ENSMUSG00000021614 7436 0.885 0.885 - - - - - versican [Source:MGI Symbol;Acc:MGI:102889]
76. Dtwd2 ENSMUSG00000024505 830 0.885 0.885 - - - - - DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
77. Tnrc18 ENSMUSG00000039477 1051 0.885 0.885 - - - - - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
78. Sik2 ENSMUSG00000037112 1369 0.885 0.885 - - - - - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
79. Rpl21 ENSMUSG00000041453 17373 0.883 0.883 - - - - - ribosomal protein L21 [Source:MGI Symbol;Acc:MGI:1278340]
80. Psmd3 ENSMUSG00000017221 4266 0.883 0.883 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 [Source:MGI Symbol;Acc:MGI:98858]
81. Snrpa1 ENSMUSG00000030512 3270 0.881 0.881 - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:MGI Symbol;Acc:MGI:1916231]
82. Rab11a ENSMUSG00000004771 5656 0.881 0.881 - - - - - RAB11A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858202]
83. Amotl2 ENSMUSG00000032531 4205 0.878 0.878 - - - - - angiomotin-like 2 [Source:MGI Symbol;Acc:MGI:1929286]
84. Rps6kb1 ENSMUSG00000020516 4554 0.878 0.878 - - - - - ribosomal protein S6 kinase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1270849]
85. Romo1 ENSMUSG00000067847 9607 0.877 0.877 - - - - - reactive oxygen species modulator 1 [Source:MGI Symbol;Acc:MGI:1914317]
86. Ppp1r9b ENSMUSG00000038976 4099 0.877 0.877 - - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
87. Arl2 ENSMUSG00000024944 4376 0.876 0.876 - - - - - ADP-ribosylation factor-like 2 [Source:MGI Symbol;Acc:MGI:1928393]
88. Smad3 ENSMUSG00000032402 3672 0.876 0.876 - - - - - SMAD family member 3 [Source:MGI Symbol;Acc:MGI:1201674]
89. Vps28 ENSMUSG00000115987 3187 0.876 0.876 - - - - - vacuolar protein sorting 28 [Source:MGI Symbol;Acc:MGI:1914164]
90. Aurkaip1 ENSMUSG00000065990 4804 0.875 0.875 - - - - - aurora kinase A interacting protein 1 [Source:MGI Symbol;Acc:MGI:1913327]
91. Plekha1 ENSMUSG00000040268 3807 0.874 0.874 - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:MGI Symbol;Acc:MGI:2442213]
92. Srsf6 ENSMUSG00000016921 23712 0.872 0.872 - - - - - serine/arginine-rich splicing factor 6 [Source:MGI Symbol;Acc:MGI:1915246]
93. Pcbp4 ENSMUSG00000023495 4918 0.87 0.870 - - - - - poly(rC) binding protein 4 [Source:MGI Symbol;Acc:MGI:1890471]
94. Eif4a1 ENSMUSG00000059796 10496 0.869 0.869 - - - - - eukaryotic translation initiation factor 4A1 [Source:MGI Symbol;Acc:MGI:95303]
95. Map4k4 ENSMUSG00000026074 13259 0.868 0.868 - - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:MGI Symbol;Acc:MGI:1349394]
96. Cnpy2 ENSMUSG00000025381 4468 0.867 0.867 - - - - - canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
97. Prpf8 ENSMUSG00000020850 7668 0.867 0.867 - - - - - pre-mRNA processing factor 8 [Source:MGI Symbol;Acc:MGI:2179381]
98. Brd1 ENSMUSG00000022387 1565 0.865 0.865 - - - - - bromodomain containing 1 [Source:MGI Symbol;Acc:MGI:1924161]
99. Msantd4 ENSMUSG00000041124 1975 0.861 0.861 - - - - - Myb/SANT-like DNA-binding domain containing 4 with coiled-coils [Source:MGI Symbol;Acc:MGI:1925350]
100. Tmcc1 ENSMUSG00000030126 2753 0.86 0.860 - - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA