Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cchcr1

Gene Name Gene ID Reads Annotation
Cchcr1 ENSMUSG00000040312 253 coiled-coil alpha-helical rod protein 1 [Source:MGI Symbol;Acc:MGI:2385321]







Genes with expression patterns similar to Cchcr1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cchcr1 ENSMUSG00000040312 253 6 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil alpha-helical rod protein 1 [Source:MGI Symbol;Acc:MGI:2385321]
2. Atf5 ENSMUSG00000038539 270 1.578 - - - - 0.713 0.865 activating transcription factor 5 [Source:MGI Symbol;Acc:MGI:2141857]
3. Calml4 ENSMUSG00000032246 106 1.495 - - - - 0.760 0.735 calmodulin-like 4 [Source:MGI Symbol;Acc:MGI:1922850]
4. Ints6 ENSMUSG00000035161 219 0.954 - - - - - 0.954 integrator complex subunit 6 [Source:MGI Symbol;Acc:MGI:1202397]
5. Slco4a1 ENSMUSG00000038963 100 0.947 - - - - - 0.947 solute carrier organic anion transporter family, member 4a1 [Source:MGI Symbol;Acc:MGI:1351866]
6. F630040K05Rik ENSMUSG00000097727 14 0.946 - - - - - 0.946 RIKEN cDNA F630040K05 gene [Source:MGI Symbol;Acc:MGI:4437734]
7. Zmat5 ENSMUSG00000009076 33 0.946 - - - - - 0.946 zinc finger, matrin type 5 [Source:MGI Symbol;Acc:MGI:1914428]
8. Gm15690 ENSMUSG00000086165 21 0.945 - - - - - 0.945 predicted gene 15690 [Source:MGI Symbol;Acc:MGI:3783131]
9. Gm23245 ENSMUSG00000065304 30 0.943 - - - - - 0.943 predicted gene, 23245 [Source:MGI Symbol;Acc:MGI:5453022]
10. Mpeg1 ENSMUSG00000046805 63 0.942 - - - - - 0.942 macrophage expressed gene 1 [Source:MGI Symbol;Acc:MGI:1333743]
11. 1010001B22Rik ENSMUSG00000097863 67 0.942 - - - - - 0.942 RIKEN cDNA 1010001B22 gene [Source:MGI Symbol;Acc:MGI:1922653]
12. H2-M3 ENSMUSG00000016206 28 0.94 - - - - - 0.940 histocompatibility 2, M region locus 3 [Source:MGI Symbol;Acc:MGI:95915]
13. AW047730 ENSMUSG00000097428 42 0.939 - - - - - 0.939 expressed sequence AW047730 [Source:MGI Symbol;Acc:MGI:2139951]
14. Gpr157 ENSMUSG00000047875 78 0.938 - - - - - 0.938 G protein-coupled receptor 157 [Source:MGI Symbol;Acc:MGI:2442046]
15. Dytn ENSMUSG00000069085 45 0.938 - - - - - 0.938 dystrotelin [Source:MGI Symbol;Acc:MGI:2685061]
16. Kcnj14 ENSMUSG00000058743 32 0.937 - - - - - 0.937 potassium inwardly-rectifying channel, subfamily J, member 14 [Source:MGI Symbol;Acc:MGI:2384820]
17. Gm2237 ENSMUSG00000093979 60 0.937 - - - - - 0.937 predicted gene 2237 [Source:MGI Symbol;Acc:MGI:3780407]
18. Ggt5 ENSMUSG00000006344 25 0.935 - - - - - 0.935 gamma-glutamyltransferase 5 [Source:MGI Symbol;Acc:MGI:1346063]
19. Arhgef6 ENSMUSG00000031133 320 0.933 - - - - - 0.933 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
20. Hist1h2bp ENSMUSG00000069308 53 0.931 - - - - - 0.931 histone cluster 1, H2bp [Source:MGI Symbol;Acc:MGI:2448409]
21. Hist1h4j ENSMUSG00000067455 64 0.931 - - - - - 0.931 histone cluster 1, H4j [Source:MGI Symbol;Acc:MGI:2448436]
22. D430041D05Rik ENSMUSG00000068373 128 0.923 - - - - - 0.923 RIKEN cDNA D430041D05 gene [Source:MGI Symbol;Acc:MGI:2181743]
23. Ndfip1 ENSMUSG00000024425 231 0.919 - - - - - 0.919 Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
24. Fcgr3 ENSMUSG00000059498 75 0.917 - - - - - 0.917 Fc receptor, IgG, low affinity III [Source:MGI Symbol;Acc:MGI:95500]
25. Gm15526 ENSMUSG00000080205 96 0.916 - - - - - 0.916 predicted gene 15526 [Source:MGI Symbol;Acc:MGI:3782973]
26. Immp2l ENSMUSG00000056899 263 0.915 - - - - - 0.915 IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2135611]
27. B230314M03Rik B230314M03Rik 97 0.915 - - - - - 0.915
28. Hspb6 ENSMUSG00000036854 399 0.915 - - - - - 0.915 heat shock protein, alpha-crystallin-related, B6 [Source:MGI Symbol;Acc:MGI:2685325]
29. Taf4b ENSMUSG00000054321 121 0.912 - - - - - 0.912 TATA-box binding protein associated factor 4b [Source:MGI Symbol;Acc:MGI:2152345]
30. Gm12396 ENSMUSG00000056412 174 0.91 - - - - - 0.910 predicted gene 12396 [Source:MGI Symbol;Acc:MGI:3649201]
31. Rfx2 ENSMUSG00000024206 298 0.909 - - - - - 0.909 regulatory factor X, 2 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106583]
32. Gm27031 Gm27031 53 0.909 - - - - - 0.909
33. Tmem41b ENSMUSG00000047554 1081 0.908 - - - - - 0.908 transmembrane protein 41B [Source:MGI Symbol;Acc:MGI:1289225]
34. Eml2 ENSMUSG00000040811 137 0.907 - - - - - 0.907 echinoderm microtubule associated protein like 2 [Source:MGI Symbol;Acc:MGI:1919455]
35. AK129341 AK129341 204 0.907 - - - - - 0.907
36. Uevld ENSMUSG00000043262 252 0.903 - - - - - 0.903 UEV and lactate/malate dehyrogenase domains [Source:MGI Symbol;Acc:MGI:1860490]
37. Rab36 ENSMUSG00000020175 400 0.903 - - - - - 0.903 RAB36, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924127]
38. Sult4a1 ENSMUSG00000018865 102 0.903 - - - - - 0.903 sulfotransferase family 4A, member 1 [Source:MGI Symbol;Acc:MGI:1888971]
39. Cmbl ENSMUSG00000022235 69 0.902 - - - - - 0.902 carboxymethylenebutenolidase-like (Pseudomonas) [Source:MGI Symbol;Acc:MGI:1916824]
40. Nudt15 ENSMUSG00000033405 77 0.901 - - - - - 0.901 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:MGI Symbol;Acc:MGI:2443366]
41. Gm14323 ENSMUSG00000082901 70 0.901 - - - - - 0.901 predicted gene 14323 [Source:MGI Symbol;Acc:MGI:3650742]
42. Kcnip4 ENSMUSG00000029088 110 0.901 - - - - - 0.901 Kv channel interacting protein 4 [Source:MGI Symbol;Acc:MGI:1933131]
43. Efcc1 ENSMUSG00000068263 338 0.9 - - - - - 0.900 EF hand and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:3611451]
44. Zfp13 ENSMUSG00000062012 261 0.899 - - - - - 0.899 zinc finger protein 13 [Source:MGI Symbol;Acc:MGI:99159]
45. Igf2os ENSMUSG00000086266 230 0.898 - - - - - 0.898 insulin-like growth factor 2, opposite strand [Source:MGI Symbol;Acc:MGI:1195257]
46. Lims2 ENSMUSG00000024395 132 0.897 - - - - - 0.897 LIM and senescent cell antigen like domains 2 [Source:MGI Symbol;Acc:MGI:2385067]
47. Fam83a ENSMUSG00000051225, ENSMUSG00000116387 119 0.896 - - - - - 0.896 family with sequence similarity 83, member A [Source:MGI Symbol;Acc:MGI:2447773]
48. Arntl ENSMUSG00000055116 296 0.895 - - - - - 0.895 aryl hydrocarbon receptor nuclear translocator-like [Source:MGI Symbol;Acc:MGI:1096381]
49. Klf14 ENSMUSG00000073209 66 0.894 - - - - - 0.894 Kruppel-like factor 14 [Source:MGI Symbol;Acc:MGI:3577024]
50. Aebp1 ENSMUSG00000020473 202 0.893 - - - - - 0.893 AE binding protein 1 [Source:MGI Symbol;Acc:MGI:1197012]
51. Gtf3a ENSMUSG00000016503 167 0.892 - - - - - 0.892 general transcription factor III A [Source:MGI Symbol;Acc:MGI:1913846]
52. C030037D09Rik ENSMUSG00000087574 291 0.89 - - - - - 0.890 RIKEN cDNA C030037D09 gene [Source:MGI Symbol;Acc:MGI:1924865]
53. Adamts15 ENSMUSG00000033453 215 0.886 - - - - - 0.886 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15 [Source:MGI Symbol;Acc:MGI:2449569]
54. Catsper2 ENSMUSG00000033486 102 0.885 - - - - - 0.885 cation channel, sperm associated 2 [Source:MGI Symbol;Acc:MGI:2387404]
55. Plk1s1 Plk1s1 700 0.885 - - - - - 0.885
56. Kdm8 ENSMUSG00000030752 110 0.885 - - - - - 0.885 lysine (K)-specific demethylase 8 [Source:MGI Symbol;Acc:MGI:1924285]
57. Pyroxd2 ENSMUSG00000060224 46 0.884 - - - - - 0.884 pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:MGI Symbol;Acc:MGI:1921830]
58. Rmdn2 ENSMUSG00000036368 115 0.881 - - - - - 0.881 regulator of microtubule dynamics 2 [Source:MGI Symbol;Acc:MGI:2147043]
59. Gm13717 ENSMUSG00000081564 55 0.88 - - - - - 0.880 predicted gene 13717 [Source:MGI Symbol;Acc:MGI:3650430]
60. Mmrn1 ENSMUSG00000054641 165 0.879 - - - - - 0.879 multimerin 1 [Source:MGI Symbol;Acc:MGI:1918195]
61. Cyb5d2 ENSMUSG00000057778 119 0.877 - - - - - 0.877 cytochrome b5 domain containing 2 [Source:MGI Symbol;Acc:MGI:2684848]
62. Aff2 ENSMUSG00000031189 271 0.877 - - - - - 0.877 AF4/FMR2 family, member 2 [Source:MGI Symbol;Acc:MGI:1202294]
63. Robo2 ENSMUSG00000052516 1177 0.876 - - - - - 0.876 roundabout guidance receptor 2 [Source:MGI Symbol;Acc:MGI:1890110]
64. Aak1 ENSMUSG00000057230 108 0.876 - - - - - 0.876 AP2 associated kinase 1 [Source:MGI Symbol;Acc:MGI:1098687]
65. Zfp867 ENSMUSG00000054519 263 0.876 - - - - - 0.876 zinc finger protein 867 [Source:MGI Symbol;Acc:MGI:2681848]
66. Hist1h4i ENSMUSG00000060639 582 0.874 - - - - - 0.874 histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
67. Wfdc2 ENSMUSG00000017723 792 0.874 - - - - - 0.874 WAP four-disulfide core domain 2 [Source:MGI Symbol;Acc:MGI:1914951]
68. Gm8318 ENSMUSG00000098222 104 0.872 - - - - - 0.872 predicted gene 8318 [Source:MGI Symbol;Acc:MGI:3646694]
69. Kcnb2 ENSMUSG00000092083 169 0.87 - - - - - 0.870 potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632]
70. Celf3 ENSMUSG00000028137 141 0.867 - - - - - 0.867 CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
71. Slc18a1 ENSMUSG00000036330 109 0.864 - - - - - 0.864 solute carrier family 18 (vesicular monoamine), member 1 [Source:MGI Symbol;Acc:MGI:106684]
72. Ppp1r3e ENSMUSG00000072494 66 0.864 - - - - - 0.864 protein phosphatase 1, regulatory subunit 3E [Source:MGI Symbol;Acc:MGI:2145790]
73. Prkcz ENSMUSG00000029053 137 0.861 - - - - - 0.861 protein kinase C, zeta [Source:MGI Symbol;Acc:MGI:97602]
74. Zfp583 ENSMUSG00000030443 165 0.859 - - - - - 0.859 zinc finger protein 583 [Source:MGI Symbol;Acc:MGI:2682297]
75. Tmem231 ENSMUSG00000031951 545 0.856 - - - - - 0.856 transmembrane protein 231 [Source:MGI Symbol;Acc:MGI:2685024]
76. Tbc1d32 ENSMUSG00000038122 287 0.856 - - - - - 0.856 TBC1 domain family, member 32 [Source:MGI Symbol;Acc:MGI:2442827]
77. Ston2 ENSMUSG00000020961 127 0.846 - - - - - 0.846 stonin 2 [Source:MGI Symbol;Acc:MGI:1918272]
78. Yod1 ENSMUSG00000046404 793 0.846 - - - - - 0.846 YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
79. Pak7 ENSMUSG00000039913 169 0.844 - - - - - 0.844 p21 (RAC1) activated kinase 7 [Source:MGI Symbol;Acc:MGI:1920334]
80. Zfp804a ENSMUSG00000070866 114 0.838 - - - - - 0.838 zinc finger protein 804A [Source:MGI Symbol;Acc:MGI:2442949]
81. Mettl25 ENSMUSG00000036009 217 0.834 - - - - - 0.834 methyltransferase like 25 [Source:MGI Symbol;Acc:MGI:3041259]
82. Car7 ENSMUSG00000031883 166 0.832 - - - - - 0.832 carbonic anhydrase 7 [Source:MGI Symbol;Acc:MGI:103100]
83. Dtd2 ENSMUSG00000020956 233 0.832 - - - - - 0.832 D-tyrosyl-tRNA deacylase 2 [Source:MGI Symbol;Acc:MGI:1923485]
84. Evc2 ENSMUSG00000050248 726 0.831 - - - - - 0.831 EvC ciliary complex subunit 2 [Source:MGI Symbol;Acc:MGI:1915775]
85. Lrp5 ENSMUSG00000024913 277 0.829 - - - - - 0.829 low density lipoprotein receptor-related protein 5 [Source:MGI Symbol;Acc:MGI:1278315]
86. Crtc1 ENSMUSG00000003575 621 0.828 - - - - - 0.828 CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
87. Eif2ak3 ENSMUSG00000031668 231 0.827 - - - - - 0.827 eukaryotic translation initiation factor 2 alpha kinase 3 [Source:MGI Symbol;Acc:MGI:1341830]
88. Slc5a6 ENSMUSG00000006641 222 0.827 - - - - - 0.827 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 [Source:MGI Symbol;Acc:MGI:2660847]
89. Adcy4 ENSMUSG00000022220 245 0.827 - - - - - 0.827 adenylate cyclase 4 [Source:MGI Symbol;Acc:MGI:99674]
90. Per2 ENSMUSG00000055866 255 0.824 - - - - 0.824 - period circadian clock 2 [Source:MGI Symbol;Acc:MGI:1195265]
91. Zscan18 ENSMUSG00000070822 285 0.823 - - - - - 0.823 zinc finger and SCAN domain containing 18 [Source:MGI Symbol;Acc:MGI:3643810]
92. Gm26641 ENSMUSG00000097045 39 0.82 - - - - 0.820 - predicted gene, 26641 [Source:MGI Symbol;Acc:MGI:5477135]
93. Ppox ENSMUSG00000062729 275 0.819 - - - - - 0.819 protoporphyrinogen oxidase [Source:MGI Symbol;Acc:MGI:104968]
94. Gemin8 ENSMUSG00000040621 325 0.819 - - - - - 0.819 gem nuclear organelle associated protein 8 [Source:MGI Symbol;Acc:MGI:2384300]
95. Osgin2 ENSMUSG00000041153 357 0.815 - - - - - 0.815 oxidative stress induced growth inhibitor family member 2 [Source:MGI Symbol;Acc:MGI:2384798]
96. D830044I16Rik 25 0.814 - - - - 0.814 - RIKEN cDNA D830044I16 gene
97. Vars2 ENSMUSG00000038838 298 0.814 - - - - - 0.814 valyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1916165]
98. Rps6ka4 ENSMUSG00000024952 117 0.813 - - - - - 0.813 ribosomal protein S6 kinase, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1930076]
99. Itpr3 ENSMUSG00000042644 184 0.813 - - - - 0.813 - inositol 1,4,5-triphosphate receptor 3 [Source:MGI Symbol;Acc:MGI:96624]
100. Gareml 193 0.812 - - - - - 0.812 GRB2 associated, regulator of MAPK1-like

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA