Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ccdc88a

Gene Name Gene ID Reads Annotation
Ccdc88a ENSMUSG00000032740 5218 coiled coil domain containing 88A [Source:MGI Symbol;Acc:MGI:1925177]







Genes with expression patterns similar to Ccdc88a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ccdc88a ENSMUSG00000032740 5218 6 1.000 1.000 1.000 1.000 1.000 1.000 coiled coil domain containing 88A [Source:MGI Symbol;Acc:MGI:1925177]
2. Mdn1 ENSMUSG00000058006 3308 0.849 - 0.849 - - - - midasin AAA ATPase 1 [Source:MGI Symbol;Acc:MGI:1926159]
3. Bod1l ENSMUSG00000061755 2689 0.797 - 0.797 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
4. Arhgap5 ENSMUSG00000035133 1989 0.787 - - 0.787 - - - Rho GTPase activating protein 5 [Source:MGI Symbol;Acc:MGI:1332637]
5. Zfand6 ENSMUSG00000030629 5868 0.774 - 0.774 - - - - zinc finger, AN1-type domain 6 [Source:MGI Symbol;Acc:MGI:1929510]
6. Ube3a ENSMUSG00000025326 5067 0.772 - - 0.772 - - - ubiquitin protein ligase E3A [Source:MGI Symbol;Acc:MGI:105098]
7. Snx5 ENSMUSG00000027423 3464 0.763 - 0.763 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
8. Pcnp ENSMUSG00000071533 6314 0.762 - 0.762 - - - - PEST proteolytic signal containing nuclear protein [Source:MGI Symbol;Acc:MGI:1923552]
9. Celf2 ENSMUSG00000002107 6599 0.757 - 0.757 - - - - CUGBP, Elav-like family member 2 [Source:MGI Symbol;Acc:MGI:1338822]
10. AI987944 ENSMUSG00000056383 1199 0.756 - 0.756 - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
11. Pbrm1 ENSMUSG00000042323 25383 0.755 - - 0.755 - - - polybromo 1 [Source:MGI Symbol;Acc:MGI:1923998]
12. Wasl ENSMUSG00000029684 2573 0.755 - 0.755 - - - - Wiskott-Aldrich syndrome-like (human) [Source:MGI Symbol;Acc:MGI:1920428]
13. Ube2b ENSMUSG00000020390 14063 0.753 0.753 - - - - - ubiquitin-conjugating enzyme E2B [Source:MGI Symbol;Acc:MGI:102944]
14. Snw1 ENSMUSG00000021039 718 0.75 - 0.750 - - - - SNW domain containing 1 [Source:MGI Symbol;Acc:MGI:1913604]
15. Opa1 ENSMUSG00000038084 1963 0.749 - 0.749 - - - - OPA1, mitochondrial dynamin like GTPase [Source:MGI Symbol;Acc:MGI:1921393]
16. Snrnp48 ENSMUSG00000021431 2417 0.749 - 0.749 - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:MGI Symbol;Acc:MGI:1915047]
17. Armc1 ENSMUSG00000027599 6408 0.747 0.747 - - - - - armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
18. Leprotl1 ENSMUSG00000031513 1832 0.745 - 0.745 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
19. Osbpl11 ENSMUSG00000022807 1117 0.738 - - 0.738 - - - oxysterol binding protein-like 11 [Source:MGI Symbol;Acc:MGI:2146553]
20. Crnkl1 ENSMUSG00000001767 959 0.735 - 0.735 - - - - crooked neck pre-mRNA splicing factor 1 [Source:MGI Symbol;Acc:MGI:1914127]
21. Tars ENSMUSG00000022241 2426 0.735 - 0.735 - - - - threonyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:106314]
22. Pmm2 ENSMUSG00000022711 580 0.734 - 0.734 - - - - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
23. BC005561 ENSMUSG00000079065 1974 0.733 - 0.733 - - - - cDNA sequence BC005561 [Source:MGI Symbol;Acc:MGI:3040669]
24. Dexi ENSMUSG00000038055 985 0.733 - 0.733 - - - - dexamethasone-induced transcript [Source:MGI Symbol;Acc:MGI:1926236]
25. Rnf122 ENSMUSG00000039328 1287 0.732 - 0.732 - - - - ring finger protein 122 [Source:MGI Symbol;Acc:MGI:1916117]
26. Hmgb1 ENSMUSG00000066551 13779 0.731 0.731 - - - - - high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]
27. Ankrd44 ENSMUSG00000052331 984 0.73 - 0.730 - - - - ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]
28. Taf3 ENSMUSG00000025782 1481 0.73 - 0.730 - - - - TATA-box binding protein associated factor 3 [Source:MGI Symbol;Acc:MGI:2388097]
29. Zfp397 ENSMUSG00000024276 1038 0.728 - 0.728 - - - - zinc finger protein 397 [Source:MGI Symbol;Acc:MGI:1916506]
30. Kif5b ENSMUSG00000006740 15165 0.728 - - 0.728 - - - kinesin family member 5B [Source:MGI Symbol;Acc:MGI:1098268]
31. Akap7 ENSMUSG00000039166 948 0.727 - 0.727 - - - - A kinase (PRKA) anchor protein 7 [Source:MGI Symbol;Acc:MGI:1859150]
32. Wdr60 ENSMUSG00000042050 672 0.727 - 0.727 - - - - WD repeat domain 60 [Source:MGI Symbol;Acc:MGI:2445085]
33. Timm17b ENSMUSG00000031158 3710 0.725 - 0.725 - - - - translocase of inner mitochondrial membrane 17b [Source:MGI Symbol;Acc:MGI:1343176]
34. Amd2 ENSMUSG00000063953 486 0.725 - 0.725 - - - - S-adenosylmethionine decarboxylase 2 [Source:MGI Symbol;Acc:MGI:1333111]
35. Xrn1 ENSMUSG00000032410 667 0.724 - 0.724 - - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
36. Uri1 ENSMUSG00000030421 4768 0.724 0.724 - - - - - URI1, prefoldin-like chaperone [Source:MGI Symbol;Acc:MGI:1342294]
37. Ndel1 ENSMUSG00000018736 3400 0.722 - 0.722 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
38. Zfp445 ENSMUSG00000047036 205 0.722 - 0.722 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
39. Fam101b 1093 0.721 - 0.721 - - - - family with sequence similarity 101, member B
40. Nif3l1 ENSMUSG00000026036 1546 0.721 - 0.721 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
41. Rbm27 ENSMUSG00000024491 2076 0.718 - 0.718 - - - - RNA binding motif protein 27 [Source:MGI Symbol;Acc:MGI:2147194]
42. Psmd12 ENSMUSG00000020720 2897 0.718 - 0.718 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:MGI Symbol;Acc:MGI:1914247]
43. Pcf11 ENSMUSG00000041328 1378 0.717 - 0.717 - - - - PCF11 cleavage and polyadenylation factor subunit [Source:MGI Symbol;Acc:MGI:1919579]
44. Katnbl1 ENSMUSG00000027132 2112 0.716 0.716 - - - - - katanin p80 subunit B like 1 [Source:MGI Symbol;Acc:MGI:1919675]
45. Alg8 ENSMUSG00000035704 1502 0.716 - 0.716 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
46. Asb7 ENSMUSG00000030509 1675 0.716 - 0.716 - - - - ankyrin repeat and SOCS box-containing 7 [Source:MGI Symbol;Acc:MGI:2152835]
47. Unc50 ENSMUSG00000026111 1866 0.716 - 0.716 - - - - unc-50 homolog [Source:MGI Symbol;Acc:MGI:1914637]
48. Rps15a-ps6 ENSMUSG00000083022 1541 0.716 - 0.716 - - - - ribosomal protein S15A, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3650298]
49. Cdipt ENSMUSG00000030682 1360 0.715 - 0.715 - - - - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:MGI Symbol;Acc:MGI:105491]
50. Gm13422 ENSMUSG00000084098 313 0.715 - 0.715 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
51. Zc3h18 ENSMUSG00000017478 2132 0.715 - 0.715 - - - - zinc finger CCCH-type containing 18 [Source:MGI Symbol;Acc:MGI:1923264]
52. Fxr1 ENSMUSG00000027680 2134 0.714 - 0.714 - - - - fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]
53. Slx1b ENSMUSG00000059772 868 0.714 - 0.714 - - - - SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915220]
54. Zfp760 ENSMUSG00000067928 1275 0.713 - - - - - 0.713 zinc finger protein 760 [Source:MGI Symbol;Acc:MGI:2679257]
55. Adat2 ENSMUSG00000019808 408 0.712 - 0.712 - - - - adenosine deaminase, tRNA-specific 2 [Source:MGI Symbol;Acc:MGI:1914007]
56. Mapk7 ENSMUSG00000001034 2601 0.712 - 0.712 - - - - mitogen-activated protein kinase 7 [Source:MGI Symbol;Acc:MGI:1346347]
57. Ddx52 ENSMUSG00000020677 2667 0.712 0.712 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
58. Ninj1 ENSMUSG00000037966 493 0.71 - 0.710 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
59. Cdkn1b ENSMUSG00000003031 5199 0.71 - 0.710 - - - - cyclin-dependent kinase inhibitor 1B [Source:MGI Symbol;Acc:MGI:104565]
60. Zfp518a ENSMUSG00000049164 1198 0.71 - - 0.710 - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
61. Magt1 ENSMUSG00000031232 5858 0.709 0.709 - - - - - magnesium transporter 1 [Source:MGI Symbol;Acc:MGI:1914325]
62. Fsd1l ENSMUSG00000054752 908 0.709 - 0.709 - - - - fibronectin type III and SPRY domain containing 1-like [Source:MGI Symbol;Acc:MGI:2442443]
63. Rpusd1 ENSMUSG00000041199 821 0.709 - 0.709 - - - - RNA pseudouridylate synthase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919186]
64. Ank1 ENSMUSG00000031543 443 0.709 - 0.709 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]
65. Tnfaip6 ENSMUSG00000053475 614 0.708 - 0.708 - - - - tumor necrosis factor alpha induced protein 6 [Source:MGI Symbol;Acc:MGI:1195266]
66. Car5a ENSMUSG00000025317 619 0.708 - 0.708 - - - - carbonic anhydrase 5a, mitochondrial [Source:MGI Symbol;Acc:MGI:101946]
67. Rabepk ENSMUSG00000070953 858 0.708 - 0.708 - - - - Rab9 effector protein with kelch motifs [Source:MGI Symbol;Acc:MGI:2139530]
68. Mark1 ENSMUSG00000026620 656 0.708 - 0.708 - - - - MAP/microtubule affinity regulating kinase 1 [Source:MGI Symbol;Acc:MGI:2664902]
69. Nup43 ENSMUSG00000040034, ENSMUSG00000116037 1278 0.707 - 0.707 - - - - nucleoporin 43 [Source:MGI Symbol;Acc:MGI:1917162]
70. Rnf7 ENSMUSG00000051234 6537 0.706 - 0.706 - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
71. Asap1 ENSMUSG00000022377 2900 0.706 - 0.706 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain1 [Source:MGI Symbol;Acc:MGI:1342335]
72. Med8 ENSMUSG00000006392 1655 0.705 - 0.705 - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
73. Skiv2l2 ENSMUSG00000016018 3259 0.705 0.705 - - - - - superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919448]
74. Pabpc1 ENSMUSG00000022283 50385 0.704 - - 0.704 - - - poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
75. Lman2l ENSMUSG00000001143 1103 0.702 - 0.702 - - - - lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
76. Tmem159 ENSMUSG00000030917 409 0.701 - 0.701 - - - - transmembrane protein 159 [Source:MGI Symbol;Acc:MGI:1925752]
77. Eif3c ENSMUSG00000030738 7179 0.7 0.700 - - - - - eukaryotic translation initiation factor 3, subunit C [Source:MGI Symbol;Acc:MGI:1926966]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA