Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ccdc40

Gene Name Gene ID Reads Annotation
Ccdc40 ENSMUSG00000039963 339 coiled-coil domain containing 40 [Source:MGI Symbol;Acc:MGI:2443893]







Genes with expression patterns similar to Ccdc40

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ccdc40 ENSMUSG00000039963 339 6 1.000 1.000 1.000 1.000 1.000 1.000 coiled-coil domain containing 40 [Source:MGI Symbol;Acc:MGI:2443893]
2. 1700066M21Rik ENSMUSG00000038323 217 0.846 - - 0.846 - - - RIKEN cDNA 1700066M21 gene [Source:MGI Symbol;Acc:MGI:1920717]
3. Rpl5 ENSMUSG00000058558 203 0.836 - - 0.836 - - - ribosomal protein L5 [Source:MGI Symbol;Acc:MGI:102854]
4. RP23-2C22.3 RP23-2C22.3 52 0.832 - - 0.832 - - -
5. Arhgap25 ENSMUSG00000030047 123 0.821 - - 0.821 - - - Rho GTPase activating protein 25 [Source:MGI Symbol;Acc:MGI:2443687]
6. Rwdd3 ENSMUSG00000028133 83 0.812 - - 0.812 - - - RWD domain containing 3 [Source:MGI Symbol;Acc:MGI:1920420]
7. Mpv17l2 ENSMUSG00000035559, ENSMUSG00000111476 271 0.809 - - 0.809 - - - MPV17 mitochondrial membrane protein-like 2 [Source:MGI Symbol;Acc:MGI:2681846]
8. Uap1l1 ENSMUSG00000026956 97 0.806 - - 0.806 - - - UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 [Source:MGI Symbol;Acc:MGI:2443318]
9. Fgf1 ENSMUSG00000036585 21 0.805 - - 0.805 - - - fibroblast growth factor 1 [Source:MGI Symbol;Acc:MGI:95515]
10. Gm26818 ENSMUSG00000097037, ENSMUSG00000106977 56 0.803 - - 0.803 - - - predicted gene, 26818 [Source:MGI Symbol;Acc:MGI:5477312]
11. Gm2381 ENSMUSG00000092225 56 0.801 - - 0.801 - - - predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
12. Fam160b2 ENSMUSG00000022095 538 0.8 - 0.800 - - - - family with sequence similarity 160, member B2 [Source:MGI Symbol;Acc:MGI:3036290]
13. Gm13212 ENSMUSG00000078502 151 0.794 - - 0.794 - - - predicted gene 13212 [Source:MGI Symbol;Acc:MGI:3651014]
14. Ifitm3 ENSMUSG00000025492 768 0.791 - - 0.791 - - - interferon induced transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:1913391]
15. Gm26457 ENSMUSG00000064612, ENSMUSG00000105060 21 0.789 - - 0.789 - - - predicted gene, 26457 [Source:MGI Symbol;Acc:MGI:5456234]
16. Slc28a3 ENSMUSG00000021553 131 0.782 - - 0.782 - - - solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Source:MGI Symbol;Acc:MGI:2137361]
17. E130311K13Rik ENSMUSG00000048581 4352 0.777 - 0.777 - - - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
18. Rpl9-ps7 ENSMUSG00000047965 225 0.771 - - 0.771 - - - ribosomal protein L9, pseudogene 7 [Source:MGI Symbol;Acc:MGI:3642824]
19. Cyp26a1 ENSMUSG00000024987 68 0.771 - 0.771 - - - - cytochrome P450, family 26, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1096359]
20. Gm15966 ENSMUSG00000085865 150 0.77 - - 0.770 - - - predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
21. Grm4 ENSMUSG00000063239 430 0.768 - - 0.768 - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
22. Cwc27 ENSMUSG00000021715 899 0.767 - 0.767 - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
23. Rasa3 ENSMUSG00000031453 708 0.763 - 0.763 - - - - RAS p21 protein activator 3 [Source:MGI Symbol;Acc:MGI:1197013]
24. Vill ENSMUSG00000038775 297 0.763 - 0.763 - - - - villin-like [Source:MGI Symbol;Acc:MGI:1201781]
25. Filip1l ENSMUSG00000043336 937 0.762 - 0.762 - - - - filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
26. Gm20707 ENSMUSG00000093594 116 0.762 - 0.762 - - - - predicted gene 20707 [Source:MGI Symbol;Acc:MGI:5313154]
27. Gca ENSMUSG00000026893 66 0.759 - - 0.759 - - - grancalcin [Source:MGI Symbol;Acc:MGI:1918521]
28. Gm9918 ENSMUSG00000097050 13 0.759 - - 0.759 - - - predicted gene 9918 [Source:MGI Symbol;Acc:MGI:3646315]
29. Scmh1 ENSMUSG00000000085 901 0.755 - - 0.755 - - - sex comb on midleg homolog 1 [Source:MGI Symbol;Acc:MGI:1352762]
30. Dnd1 ENSMUSG00000044595 214 0.754 - - 0.754 - - - DND microRNA-mediated repression inhibitor 1 [Source:MGI Symbol;Acc:MGI:2447763]
31. 9330136K24Rik ENSMUSG00000097781 47 0.753 - - 0.753 - - - RIKEN cDNA 9330136K24 gene [Source:MGI Symbol;Acc:MGI:2442883]
32. Hist1h4b ENSMUSG00000069266 30 0.752 - - 0.752 - - - histone cluster 1, H4b [Source:MGI Symbol;Acc:MGI:2448420]
33. Slc23a1 ENSMUSG00000024354 693 0.752 - - 0.752 - - - solute carrier family 23 (nucleobase transporters), member 1 [Source:MGI Symbol;Acc:MGI:1341903]
34. Carm1 ENSMUSG00000032185 70 0.752 - 0.752 - - - - coactivator-associated arginine methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913208]
35. Adam34 ENSMUSG00000079058 5 0.75 - - 0.750 - - - a disintegrin and metallopeptidase domain 34 [Source:MGI Symbol;Acc:MGI:2181992]
36. Gm8624 ENSMUSG00000083705 39 0.75 - - 0.750 - - - predicted gene 8624 [Source:MGI Symbol;Acc:MGI:3646811]
37. B230378P21Rik B230378P21Rik 11 0.749 - - 0.749 - - -
38. Crkl ENSMUSG00000006134 56 0.748 - - 0.748 - - - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:MGI Symbol;Acc:MGI:104686]
39. Ppfia3 ENSMUSG00000003863 172 0.748 - - 0.748 - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:MGI Symbol;Acc:MGI:1924037]
40. Gm13623 ENSMUSG00000083007 12 0.747 - - 0.747 - - - predicted gene 13623 [Source:MGI Symbol;Acc:MGI:3649578]
41. E130006D01Rik ENSMUSG00000085271 39 0.747 - - 0.747 - - - RIKEN cDNA E130006D01 gene [Source:MGI Symbol;Acc:MGI:2685527]
42. 9230113P08Rik ENSMUSG00000078934 19 0.746 - - 0.746 - - - RIKEN cDNA 9230113P08 gene [Source:MGI Symbol;Acc:MGI:1925158]
43. Gm24276 ENSMUSG00000076135 6 0.742 - - 0.742 - - - predicted gene, 24276 [Source:MGI Symbol;Acc:MGI:5454053]
44. Lrrc23 ENSMUSG00000030125 5 0.74 - - 0.740 - - - leucine rich repeat containing 23 [Source:MGI Symbol;Acc:MGI:1315192]
45. Zfp819 ENSMUSG00000055102 59 0.74 - - 0.740 - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
46. Cd300a ENSMUSG00000034652 37 0.739 - - 0.739 - - - CD300A molecule [Source:MGI Symbol;Acc:MGI:2443411]
47. Gm16740 ENSMUSG00000097167 32 0.739 - - 0.739 - - - predicted gene, 16740 [Source:MGI Symbol;Acc:MGI:4439664]
48. Gm12959 ENSMUSG00000081678 96 0.739 - - 0.739 - - - predicted gene 12959 [Source:MGI Symbol;Acc:MGI:3649444]
49. Slc26a1 ENSMUSG00000046959 24 0.738 - - 0.738 - - - solute carrier family 26 (sulfate transporter), member 1 [Source:MGI Symbol;Acc:MGI:2385894]
50. Blnk ENSMUSG00000061132 28 0.738 - - 0.738 - - - B cell linker [Source:MGI Symbol;Acc:MGI:96878]
51. Gm10780 ENSMUSG00000074877 28 0.738 - - 0.738 - - - predicted gene 10780 [Source:MGI Symbol;Acc:MGI:3642422]
52. Htr1b ENSMUSG00000049511 77 0.738 - - 0.738 - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
53. Myo1g ENSMUSG00000020437 55 0.738 - - 0.738 - - - myosin IG [Source:MGI Symbol;Acc:MGI:1927091]
54. Tprn ENSMUSG00000048707 122 0.737 - - 0.737 - - - taperin [Source:MGI Symbol;Acc:MGI:2139535]
55. Nlrp4e ENSMUSG00000045693 6 0.735 - - 0.735 - - - NLR family, pyrin domain containing 4E [Source:MGI Symbol;Acc:MGI:3056600]
56. BC051070 BC051070 6 0.735 - - 0.735 - - -
57. Il17f ENSMUSG00000041872 5 0.735 - - 0.735 - - - interleukin 17F [Source:MGI Symbol;Acc:MGI:2676631]
58. Gm12607 ENSMUSG00000083989 11 0.735 - - 0.735 - - - predicted gene 12607 [Source:MGI Symbol;Acc:MGI:3649224]
59. Gm23585 ENSMUSG00000088281 3 0.735 - - 0.735 - - - predicted gene, 23585 [Source:MGI Symbol;Acc:MGI:5453362]
60. Gm15839 ENSMUSG00000084999 24 0.735 - - 0.735 - - - predicted gene 15839 [Source:MGI Symbol;Acc:MGI:3801729]
61. 9530026F06Rik ENSMUSG00000085447 9 0.735 - - 0.735 - - - RIKEN cDNA 9530026F06 gene [Source:MGI Symbol;Acc:MGI:1924591]
62. Med15 ENSMUSG00000012114 564 0.735 - - 0.735 - - - mediator complex subunit 15 [Source:MGI Symbol;Acc:MGI:2137379]
63. Gm23061 ENSMUSG00000076303 10 0.735 - - 0.735 - - - predicted gene, 23061 [Source:MGI Symbol;Acc:MGI:5452838]
64. A330040F15Rik ENSMUSG00000086213 6 0.735 - - 0.735 - - - RIKEN cDNA A330040F15 gene [Source:MGI Symbol;Acc:MGI:3698434]
65. Trim14 ENSMUSG00000039853 4 0.735 - - 0.735 - - - tripartite motif-containing 14 [Source:MGI Symbol;Acc:MGI:1921985]
66. Cts8 ENSMUSG00000057446 3 0.735 - - 0.735 - - - cathepsin 8 [Source:MGI Symbol;Acc:MGI:1860275]
67. Gm20627 ENSMUSG00000093507 9 0.735 - - 0.735 - - - predicted gene 20627 [Source:MGI Symbol;Acc:MGI:5313074]
68. Gm13433 ENSMUSG00000083043 4 0.735 - - 0.735 - - - predicted gene 13433 [Source:MGI Symbol;Acc:MGI:3651454]
69. Gm14861 ENSMUSG00000083502 4 0.735 - - 0.735 - - - predicted gene 14861 [Source:MGI Symbol;Acc:MGI:3802070]
70. Hoxc10 ENSMUSG00000022484 1050 0.735 - - 0.735 - - - homeobox C10 [Source:MGI Symbol;Acc:MGI:96192]
71. Pcnxl2 Pcnxl2 7 0.735 - - 0.735 - - -
72. 4930594M22Rik ENSMUSG00000075463, ENSMUSG00000085423 12 0.735 - - 0.735 - - - RIKEN cDNA 4930594M22 gene [Source:MGI Symbol;Acc:MGI:1925478]
73. Gm16793 ENSMUSG00000097357 5 0.735 - - 0.735 - - - predicted gene, 16793 [Source:MGI Symbol;Acc:MGI:4439717]
74. Gm26739 ENSMUSG00000097702 13 0.734 - - 0.734 - - - predicted gene, 26739 [Source:MGI Symbol;Acc:MGI:5477233]
75. Lmod2 ENSMUSG00000029683 9 0.734 - - 0.734 - - - leiomodin 2 (cardiac) [Source:MGI Symbol;Acc:MGI:2135672]
76. Cox11 ENSMUSG00000020544 17 0.733 - - 0.733 - - - cytochrome c oxidase assembly protein 11, copper chaperone [Source:MGI Symbol;Acc:MGI:1917052]
77. Gabrb2 ENSMUSG00000007653 18 0.733 - - 0.733 - - - gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620]
78. Unc13c ENSMUSG00000062151 48 0.733 - - 0.733 - - - unc-13 homolog C [Source:MGI Symbol;Acc:MGI:2149021]
79. Hspa1a ENSMUSG00000091971 39 0.732 - - 0.732 - - - heat shock protein 1A [Source:MGI Symbol;Acc:MGI:96244]
80. Ifih1 ENSMUSG00000026896 49 0.732 - - 0.732 - - - interferon induced with helicase C domain 1 [Source:MGI Symbol;Acc:MGI:1918836]
81. Fam13c ENSMUSG00000043259 44 0.731 - - 0.731 - - - family with sequence similarity 13, member C [Source:MGI Symbol;Acc:MGI:1918971]
82. Dnase1l2 ENSMUSG00000024136 149 0.731 - - 0.731 - - - deoxyribonuclease 1-like 2 [Source:MGI Symbol;Acc:MGI:1913955]
83. Gm15487 Gm15487 37 0.73 - - 0.730 - - -
84. Gm13205 ENSMUSG00000086606 103 0.73 - - 0.730 - - - predicted gene 13205 [Source:MGI Symbol;Acc:MGI:3700976]
85. 2010015M23Rik ENSMUSG00000096983, ENSMUSG00000102444 131 0.73 - - 0.730 - - - RIKEN cDNA 2010015M23 gene [Source:MGI Symbol;Acc:MGI:1919337]
86. Rara ENSMUSG00000037992 1723 0.729 - - 0.729 - - - retinoic acid receptor, alpha [Source:MGI Symbol;Acc:MGI:97856]
87. Slc4a5 ENSMUSG00000068323 56 0.728 - - 0.728 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 5 [Source:MGI Symbol;Acc:MGI:2443220]
88. Padi3 ENSMUSG00000025328 7 0.728 - - 0.728 - - - peptidyl arginine deiminase, type III [Source:MGI Symbol;Acc:MGI:1338891]
89. Gm14318 Gm14318 6 0.728 0.728 - - - - -
90. Slc25a35 ENSMUSG00000018740 90 0.728 - - 0.728 - - - solute carrier family 25, member 35 [Source:MGI Symbol;Acc:MGI:1919248]
91. Kcnc3 ENSMUSG00000062785 76 0.727 - - 0.727 - - - potassium voltage gated channel, Shaw-related subfamily, member 3 [Source:MGI Symbol;Acc:MGI:96669]
92. Jph2 ENSMUSG00000017817 39 0.727 - - 0.727 - - - junctophilin 2 [Source:MGI Symbol;Acc:MGI:1891496]
93. Tle2 ENSMUSG00000034771 131 0.727 - - 0.727 - - - transducin-like enhancer of split 2 [Source:MGI Symbol;Acc:MGI:104635]
94. Tg ENSMUSG00000053469 17 0.727 - - 0.727 - - - thyroglobulin [Source:MGI Symbol;Acc:MGI:98733]
95. Sirt7 ENSMUSG00000025138 832 0.727 - 0.727 - - - - sirtuin 7 [Source:MGI Symbol;Acc:MGI:2385849]
96. Rpl31-ps12 ENSMUSG00000116648 8 0.727 - - 0.727 - - - ribosomal protein L31, pseudogene 1 2 [Source:NCBI gene;Acc:665562]
97. Snord73a ENSMUSG00000064984 35 0.726 - - 0.726 - - - small nucleolar RNA, C/D box U73A [Source:MGI Symbol;Acc:MGI:1321388]
98. Gdf9 ENSMUSG00000018238 20 0.725 - - 0.725 - - - growth differentiation factor 9 [Source:MGI Symbol;Acc:MGI:95692]
99. Atp9a ENSMUSG00000027546 457 0.724 - 0.724 - - - - ATPase, class II, type 9A [Source:MGI Symbol;Acc:MGI:1330826]
100. Iqcd ENSMUSG00000029601 20 0.724 - - 0.724 - - - IQ motif containing D [Source:MGI Symbol;Acc:MGI:1922982]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA