Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cast

Gene Name Gene ID Reads Annotation
Cast ENSMUSG00000021585 296 calpastatin [Source:MGI Symbol;Acc:MGI:1098236]







Genes with expression patterns similar to Cast

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cast ENSMUSG00000021585 296 6 1.000 1.000 1.000 1.000 1.000 1.000 calpastatin [Source:MGI Symbol;Acc:MGI:1098236]
2. 6330549D23Rik ENSMUSG00000045327 93 0.884 - - 0.884 - - - RIKEN cDNA 6330549D23 gene [Source:MGI Symbol;Acc:MGI:2442586]
3. Emp2 ENSMUSG00000022505 118 0.862 - 0.862 - - - - epithelial membrane protein 2 [Source:MGI Symbol;Acc:MGI:1098726]
4. mt-Nd6 ENSMUSG00000064368 301 0.848 - - - - - 0.848 mitochondrially encoded NADH dehydrogenase 6 [Source:MGI Symbol;Acc:MGI:102495]
5. Diap1 Diap1 625 0.827 - - - - - 0.827
6. Bace2 ENSMUSG00000040605 132 0.825 - - - - - 0.825 beta-site APP-cleaving enzyme 2 [Source:MGI Symbol;Acc:MGI:1860440]
7. Gm15843 ENSMUSG00000085812 90 0.823 - - - - 0.823 - predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
8. Ces2b ENSMUSG00000050097 81 0.823 - - 0.823 - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
9. Gm22513 ENSMUSG00000096349 53 0.82 - - 0.820 - - - predicted gene, 22513 [Source:MGI Symbol;Acc:MGI:5452290]
10. Slc17a6 ENSMUSG00000030500 178 0.816 - - 0.816 - - - solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 [Source:MGI Symbol;Acc:MGI:2156052]
11. Gdf6 ENSMUSG00000051279 173 0.811 - - - - - 0.811 growth differentiation factor 6 [Source:MGI Symbol;Acc:MGI:95689]
12. Ttc38 ENSMUSG00000035944 225 0.805 - 0.805 - - - - tetratricopeptide repeat domain 38 [Source:MGI Symbol;Acc:MGI:2146198]
13. Gm22796 ENSMUSG00000087859 757 0.802 - - 0.802 - - - predicted gene, 22796 [Source:MGI Symbol;Acc:MGI:5452573]
14. RP24-390G17.1 RP24-390G17.1 125 0.798 - - - - - 0.798
15. Lin52 ENSMUSG00000085793 383 0.794 - 0.794 - - - - lin-52 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:3045391]
16. Mall ENSMUSG00000027377 52 0.785 - - - - 0.785 - mal, T cell differentiation protein-like [Source:MGI Symbol;Acc:MGI:2385152]
17. Atp10a ENSMUSG00000025324 152 0.781 - - - - 0.781 - ATPase, class V, type 10A [Source:MGI Symbol;Acc:MGI:1330809]
18. Gm20448 Gm20448 48 0.78 - - - - 0.780 -
19. Zdhhc1 ENSMUSG00000039199 84 0.78 - 0.780 - - - - zinc finger, DHHC domain containing 1 [Source:MGI Symbol;Acc:MGI:1918046]
20. Rps10-ps1 ENSMUSG00000060438 22505 0.779 - - 0.779 - - - ribosomal protein S10, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644167]
21. Dusp1 ENSMUSG00000024190 421 0.778 - 0.778 - - - - dual specificity phosphatase 1 [Source:MGI Symbol;Acc:MGI:105120]
22. Kcnk3 ENSMUSG00000049265 209 0.776 - 0.776 - - - - potassium channel, subfamily K, member 3 [Source:MGI Symbol;Acc:MGI:1100509]
23. Ier5l ENSMUSG00000089762 201 0.773 - - - - 0.773 - immediate early response 5-like [Source:MGI Symbol;Acc:MGI:1919750]
24. Gpd1l ENSMUSG00000050627 467 0.773 - - - - - 0.773 glycerol-3-phosphate dehydrogenase 1-like [Source:MGI Symbol;Acc:MGI:1289257]
25. Gm14849 ENSMUSG00000081807 337 0.772 - - - - 0.772 - predicted gene 14849 [Source:MGI Symbol;Acc:MGI:3802125]
26. Gorasp1 ENSMUSG00000032513 360 0.77 - 0.770 - - - - golgi reassembly stacking protein 1 [Source:MGI Symbol;Acc:MGI:1921748]
27. Emp3 ENSMUSG00000040212 1609 0.769 - 0.769 - - - - epithelial membrane protein 3 [Source:MGI Symbol;Acc:MGI:1098729]
28. Napepld ENSMUSG00000044968 544 0.764 - - - - - 0.764 N-acyl phosphatidylethanolamine phospholipase D [Source:MGI Symbol;Acc:MGI:2140885]
29. Tmem194b 374 0.762 - - - - - 0.762 transmembrane protein 194B, transcript variant X1
30. Gast ENSMUSG00000017165 13 0.761 - - - - 0.761 - gastrin [Source:MGI Symbol;Acc:MGI:104768]
31. Ppargc1b ENSMUSG00000033871 120 0.761 - - - - 0.761 - peroxisome proliferative activated receptor, gamma, coactivator 1 beta [Source:MGI Symbol;Acc:MGI:2444934]
32. Apba1 ENSMUSG00000024897 107 0.759 - - - - 0.759 - amyloid beta (A4) precursor protein binding, family A, member 1 [Source:MGI Symbol;Acc:MGI:1860297]
33. Sympk ENSMUSG00000023118 611 0.759 - 0.759 - - - - symplekin [Source:MGI Symbol;Acc:MGI:1915438]
34. Shf ENSMUSG00000033256 192 0.757 - - - - 0.757 - Src homology 2 domain containing F [Source:MGI Symbol;Acc:MGI:3613669]
35. Dip2c ENSMUSG00000048264 410 0.755 - - - - - 0.755 disco interacting protein 2 homolog C [Source:MGI Symbol;Acc:MGI:1920179]
36. Gm26606 ENSMUSG00000097337 23 0.755 - - - - 0.755 - predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
37. Rpl36-ps2 ENSMUSG00000024205 2450 0.753 - - 0.753 - - - ribosomal protein L36, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3650081]
38. Relb ENSMUSG00000002983 1128 0.75 - - - - 0.750 - avian reticuloendotheliosis viral (v-rel) oncogene related B [Source:MGI Symbol;Acc:MGI:103289]
39. Tep1 ENSMUSG00000006281 119 0.75 - 0.750 - - - - telomerase associated protein 1 [Source:MGI Symbol;Acc:MGI:109573]
40. Sep-04 Sep-04 178 0.749 - - - - 0.749 -
41. Nrcam ENSMUSG00000020598 266 0.747 - - 0.747 - - - neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
42. Hdhd2 ENSMUSG00000025421 1778 0.746 - - 0.746 - - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:MGI Symbol;Acc:MGI:1924237]
43. Glcci1 ENSMUSG00000029638 55 0.746 - - - - 0.746 - glucocorticoid induced transcript 1 [Source:MGI Symbol;Acc:MGI:2179717]
44. Rpl21-ps6 ENSMUSG00000059912 86 0.746 - - 0.746 - - - ribosomal protein L21, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3643554]
45. Efna1 ENSMUSG00000027954 326 0.746 - - - - - 0.746 ephrin A1 [Source:MGI Symbol;Acc:MGI:103236]
46. Gm14391 ENSMUSG00000078903 51 0.745 - - - - 0.745 - predicted gene 14391 [Source:MGI Symbol;Acc:MGI:3709324]
47. Ttll13 ENSMUSG00000045467 27 0.745 - - - - 0.745 - tubulin tyrosine ligase-like family, member 13 [Source:MGI Symbol;Acc:MGI:1920845]
48. Eef1e1 ENSMUSG00000001707 2763 0.744 - - 0.744 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]
49. Il16 ENSMUSG00000001741 60 0.744 - - - - 0.744 - interleukin 16 [Source:MGI Symbol;Acc:MGI:1270855]
50. BC048403 ENSMUSG00000053684 84 0.744 - - - - 0.744 - cDNA sequence BC048403 [Source:MGI Symbol;Acc:MGI:2670984]
51. A730090N16Rik ENSMUSG00000090120 19 0.742 - - - - 0.742 - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
52. Gm16712 ENSMUSG00000097077 14 0.742 - - - - 0.742 - predicted gene, 16712 [Source:MGI Symbol;Acc:MGI:4439636]
53. Gm22791 ENSMUSG00000087857 19 0.742 - - - - 0.742 - predicted gene, 22791 [Source:MGI Symbol;Acc:MGI:5452568]
54. Ltk ENSMUSG00000027297 12 0.742 - - - - 0.742 - leukocyte tyrosine kinase [Source:MGI Symbol;Acc:MGI:96840]
55. Rnpep ENSMUSG00000041926 569 0.74 - - - - - 0.740 arginyl aminopeptidase (aminopeptidase B) [Source:MGI Symbol;Acc:MGI:2384902]
56. Aox1 ENSMUSG00000063558 17 0.74 - - - - 0.740 - aldehyde oxidase 1 [Source:MGI Symbol;Acc:MGI:88035]
57. P2rx6 ENSMUSG00000022758 13 0.74 - - - - 0.740 - purinergic receptor P2X, ligand-gated ion channel, 6 [Source:MGI Symbol;Acc:MGI:1337113]
58. Stmnd1 ENSMUSG00000063529 14 0.74 - - - - 0.740 - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
59. Gm26807 ENSMUSG00000097484 14 0.74 - - - - 0.740 - predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
60. 1600014C23Rik ENSMUSG00000094690 35 0.74 - - - - 0.740 - RIKEN cDNA 1600014C23 gene [Source:MGI Symbol;Acc:MGI:1919490]
61. Gm14513 ENSMUSG00000080811 3705 0.74 - - 0.740 - - - predicted gene 14513 [Source:MGI Symbol;Acc:MGI:3648369]
62. Gm2531 ENSMUSG00000058567 236 0.739 - - - - - 0.739 predicted gene 2531 [Source:MGI Symbol;Acc:MGI:3780699]
63. Cr2 ENSMUSG00000026616 16 0.739 - - - - 0.739 - complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
64. Phykpl ENSMUSG00000020359 114 0.739 - - - - 0.739 - 5-phosphohydroxy-L-lysine phospholyase [Source:MGI Symbol;Acc:MGI:1920197]
65. Pcdhb3 ENSMUSG00000045498 48 0.738 - - - - 0.738 - protocadherin beta 3 [Source:MGI Symbol;Acc:MGI:2136737]
66. Maf ENSMUSG00000055435 2645 0.737 - 0.737 - - - - avian musculoaponeurotic fibrosarcoma oncogene homolog [Source:MGI Symbol;Acc:MGI:96909]
67. Commd9 ENSMUSG00000027163 464 0.737 - 0.737 - - - - COMM domain containing 9 [Source:MGI Symbol;Acc:MGI:1923751]
68. Cep19 ENSMUSG00000035790 440 0.736 - - - - 0.736 - centrosomal protein 19 [Source:MGI Symbol;Acc:MGI:1914244]
69. Epyc ENSMUSG00000019936 32 0.734 - - - - 0.734 - epiphycan [Source:MGI Symbol;Acc:MGI:107942]
70. Zfand1 ENSMUSG00000039795 282 0.733 - 0.733 - - - - zinc finger, AN1-type domain 1 [Source:MGI Symbol;Acc:MGI:1913611]
71. Tmem199 ENSMUSG00000051232 1414 0.732 - - 0.732 - - - transmembrane protein 199 [Source:MGI Symbol;Acc:MGI:2144113]
72. Gm5863 ENSMUSG00000082927 407 0.732 - - - - - 0.732 predicted gene 5863 [Source:MGI Symbol;Acc:MGI:3648580]
73. Smim1 ENSMUSG00000078350 279 0.73 - 0.730 - - - - small integral membrane protein 1 [Source:MGI Symbol;Acc:MGI:1916109]
74. Sytl1 ENSMUSG00000028860 26 0.73 - - - - 0.730 - synaptotagmin-like 1 [Source:MGI Symbol;Acc:MGI:1933365]
75. Rab36 ENSMUSG00000020175 400 0.729 - 0.729 - - - - RAB36, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1924127]
76. Fancm ENSMUSG00000055884 812 0.729 - - 0.729 - - - Fanconi anemia, complementation group M [Source:MGI Symbol;Acc:MGI:2442306]
77. Noc2l ENSMUSG00000095567 594 0.728 - - - - 0.728 - NOC2 like nucleolar associated transcriptional repressor [Source:MGI Symbol;Acc:MGI:1931051]
78. Ttc8 ENSMUSG00000021013 490 0.727 - - - - - 0.727 tetratricopeptide repeat domain 8 [Source:MGI Symbol;Acc:MGI:1923510]
79. Sh3bp2 ENSMUSG00000054520 148 0.727 - - - - 0.727 - SH3-domain binding protein 2 [Source:MGI Symbol;Acc:MGI:1346349]
80. Wsb2 ENSMUSG00000029364 343 0.726 - - - - 0.726 - WD repeat and SOCS box-containing 2 [Source:MGI Symbol;Acc:MGI:2144041]
81. Gm8121 ENSMUSG00000051116 163 0.725 - - - - 0.725 - predicted pseudogene 8121 [Source:MGI Symbol;Acc:MGI:3645325]
82. Btn1a1 ENSMUSG00000000706 24 0.724 - - - - 0.724 - butyrophilin, subfamily 1, member A1 [Source:MGI Symbol;Acc:MGI:103118]
83. Gpx3 ENSMUSG00000018339 1590 0.723 - 0.723 - - - - glutathione peroxidase 3 [Source:MGI Symbol;Acc:MGI:105102]
84. Maff ENSMUSG00000042622 176 0.722 - - - - 0.722 - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) [Source:MGI Symbol;Acc:MGI:96910]
85. Oxsm ENSMUSG00000021786 115 0.722 - - - - 0.722 - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
86. Clu ENSMUSG00000022037 250 0.721 - 0.721 - - - - clusterin [Source:MGI Symbol;Acc:MGI:88423]
87. Trim11 ENSMUSG00000020455 522 0.719 - - - - 0.719 - tripartite motif-containing 11 [Source:MGI Symbol;Acc:MGI:2137355]
88. Fzd4 ENSMUSG00000049791 158 0.719 - 0.719 - - - - frizzled class receptor 4 [Source:MGI Symbol;Acc:MGI:108520]
89. Plekha4 ENSMUSG00000040428 205 0.714 - - 0.714 - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 [Source:MGI Symbol;Acc:MGI:1916467]
90. Nat2 ENSMUSG00000051147 123 0.714 - - - - 0.714 - N-acetyltransferase 2 (arylamine N-acetyltransferase) [Source:MGI Symbol;Acc:MGI:109201]
91. Pitx1 ENSMUSG00000021506 2270 0.713 - 0.713 - - - - paired-like homeodomain transcription factor 1 [Source:MGI Symbol;Acc:MGI:107374]
92. Fam13b ENSMUSG00000036501 75 0.713 - - - - 0.713 - family with sequence similarity 13, member B [Source:MGI Symbol;Acc:MGI:2447834]
93. 4933438K21Rik ENSMUSG00000093617 64 0.712 - - - - 0.712 - RIKEN cDNA 4933438K21 gene [Source:MGI Symbol;Acc:MGI:1918520]
94. Trim21 ENSMUSG00000030966 294 0.711 - - - - - 0.711 tripartite motif-containing 21 [Source:MGI Symbol;Acc:MGI:106657]
95. 5730508B09Rik 361 0.708 - 0.708 - - - - RIKEN cDNA 5730508B09 gene
96. Inca1 ENSMUSG00000057054 30 0.708 - - - - - 0.708 inhibitor of CDK, cyclin A1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2144284]
97. Mrs2 ENSMUSG00000021339 104 0.707 - - - - 0.707 - MRS2 magnesium transporter [Source:MGI Symbol;Acc:MGI:2685748]
98. Haus5 ENSMUSG00000078762 515 0.706 - - 0.706 - - - HAUS augmin-like complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1919159]
99. Kdm4b ENSMUSG00000024201 1440 0.706 - - 0.706 - - - lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
100. Lyst ENSMUSG00000019726 99 0.706 - - - - 0.706 - lysosomal trafficking regulator [Source:MGI Symbol;Acc:MGI:107448]

There are 13 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA