Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Capn1

Gene Name Gene ID Reads Annotation
Capn1 ENSMUSG00000024942 102 calpain 1 [Source:MGI Symbol;Acc:MGI:88263]







Genes with expression patterns similar to Capn1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Capn1 ENSMUSG00000024942 102 6 1.000 1.000 1.000 1.000 1.000 1.000 calpain 1 [Source:MGI Symbol;Acc:MGI:88263]
2. Cox11 ENSMUSG00000020544 17 1.671 0.911 - - 0.760 - - cytochrome c oxidase assembly protein 11, copper chaperone [Source:MGI Symbol;Acc:MGI:1917052]
3. Rsl1 ENSMUSG00000058900 68 0.927 0.927 - - - - - regulator of sex limited protein 1 [Source:MGI Symbol;Acc:MGI:3044162]
4. Gm6472 ENSMUSG00000095597 22 0.919 0.919 - - - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
5. Hsbp1l1 ENSMUSG00000078963 61 0.916 0.916 - - - - - heat shock factor binding protein 1-like 1 [Source:MGI Symbol;Acc:MGI:1913505]
6. 4732465J04Rik ENSMUSG00000101517 8 0.916 0.916 - - - - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
7. Gm9516 ENSMUSG00000081280 11 0.916 0.916 - - - - - predicted gene 9516 [Source:MGI Symbol;Acc:MGI:3779926]
8. Ccdc142 ENSMUSG00000107499 18 0.914 0.914 - - - - - coiled-coil domain containing 142 [Source:MGI Symbol;Acc:MGI:3045292]
9. RNF8 RNF8 23 0.914 0.914 - - - - -
10. Pcdhb18 ENSMUSG00000048347 44 0.912 0.912 - - - - - protocadherin beta 18 [Source:MGI Symbol;Acc:MGI:2136756]
11. Ccdc68 ENSMUSG00000038903 129 0.912 0.912 - - - - - coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
12. Ankef1 ENSMUSG00000074771 14 0.911 0.911 - - - - - ankyrin repeat and EF-hand domain containing 1 [Source:MGI Symbol;Acc:MGI:2441685]
13. Gm16292 Gm16292 40 0.911 0.911 - - - - -
14. Gm6043 ENSMUSG00000075245 56 0.908 0.908 - - - - - predicted gene 6043 [Source:MGI Symbol;Acc:MGI:3805955]
15. Hist1h3g ENSMUSG00000099517 97 0.908 0.908 - - - - - histone cluster 1, H3g [Source:MGI Symbol;Acc:MGI:2145541]
16. Gm26891 ENSMUSG00000097455 8 0.906 0.906 - - - - - predicted gene, 26891 [Source:MGI Symbol;Acc:MGI:5477385]
17. Gm11837 ENSMUSG00000086587 10 0.906 0.906 - - - - - predicted gene 11837 [Source:MGI Symbol;Acc:MGI:3702175]
18. Sgcg ENSMUSG00000035296 66 0.905 0.905 - - - - - sarcoglycan, gamma (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:1346524]
19. Ltc4s ENSMUSG00000020377 18 0.903 0.903 - - - - - leukotriene C4 synthase [Source:MGI Symbol;Acc:MGI:107498]
20. Mmp9 ENSMUSG00000017737 16 0.901 0.901 - - - - - matrix metallopeptidase 9 [Source:MGI Symbol;Acc:MGI:97011]
21. Gad2 ENSMUSG00000026787 118 0.9 0.900 - - - - - glutamic acid decarboxylase 2 [Source:MGI Symbol;Acc:MGI:95634]
22. Gm26507 ENSMUSG00000097618 43 0.9 0.900 - - - - - predicted gene, 26507 [Source:MGI Symbol;Acc:MGI:5477001]
23. Ifi203 ENSMUSG00000039997 17 0.898 0.898 - - - - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
24. Gm12097 ENSMUSG00000081887 11 0.896 0.896 - - - - - predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
25. Gfra2 ENSMUSG00000022103 94 0.892 0.892 - - - - - glial cell line derived neurotrophic factor family receptor alpha 2 [Source:MGI Symbol;Acc:MGI:1195462]
26. Wdr59 ENSMUSG00000031959 222 0.887 0.887 - - - - - WD repeat domain 59 [Source:MGI Symbol;Acc:MGI:2442115]
27. Tmem25 ENSMUSG00000002032 100 0.886 0.886 - - - - - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
28. Gm12034 ENSMUSG00000083878 29 0.884 0.884 - - - - - predicted gene 12034 [Source:MGI Symbol;Acc:MGI:3651409]
29. Cd46 ENSMUSG00000016493 37 0.882 0.882 - - - - - CD46 antigen, complement regulatory protein [Source:MGI Symbol;Acc:MGI:1203290]
30. Hes7 ENSMUSG00000023781 71 0.882 0.882 - - - - - hes family bHLH transcription factor 7 [Source:MGI Symbol;Acc:MGI:2135679]
31. Tmprss7 ENSMUSG00000033177 23 0.881 0.881 - - - - - transmembrane serine protease 7 [Source:MGI Symbol;Acc:MGI:2686594]
32. Rec8 ENSMUSG00000002324 93 0.875 0.875 - - - - - REC8 meiotic recombination protein [Source:MGI Symbol;Acc:MGI:1929645]
33. Gm8618 ENSMUSG00000073559 115 0.868 0.868 - - - - - predicted gene 8618 [Source:MGI Symbol;Acc:MGI:3647540]
34. Vstm2b ENSMUSG00000039257 64 0.861 0.861 - - - - - V-set and transmembrane domain containing 2B [Source:MGI Symbol;Acc:MGI:1914525]
35. Mon1a ENSMUSG00000032583 195 0.86 0.860 - - - - - MON1 homolog A, secretory traffciking associated [Source:MGI Symbol;Acc:MGI:1920075]
36. Ttc6 ENSMUSG00000046782 54 0.854 0.854 - - - - - tetratricopeptide repeat domain 6 [Source:MGI Symbol;Acc:MGI:2684915]
37. 1110054M08Rik 1110054M08Rik 99 0.854 0.854 - - - - -
38. Smpdl3a ENSMUSG00000019872 249 0.853 0.853 - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:MGI Symbol;Acc:MGI:1931437]
39. Medag ENSMUSG00000029659 58 0.852 0.852 - - - - - mesenteric estrogen dependent adipogenesis [Source:MGI Symbol;Acc:MGI:1917967]
40. Gjb5 ENSMUSG00000042357 51 0.851 0.851 - - - - - gap junction protein, beta 5 [Source:MGI Symbol;Acc:MGI:95723]
41. Gm26944 ENSMUSG00000098066 30 0.849 0.849 - - - - - predicted gene, 26944 [Source:MGI Symbol;Acc:MGI:5504059]
42. Acad12 ENSMUSG00000042647 35 0.848 0.848 - - - - - acyl-Coenzyme A dehydrogenase family, member 12 [Source:MGI Symbol;Acc:MGI:2443320]
43. Tm6sf2 ENSMUSG00000036151 39 0.843 0.843 - - - - - transmembrane 6 superfamily member 2 [Source:MGI Symbol;Acc:MGI:1933210]
44. Rpl30-ps3 ENSMUSG00000080873 111 0.843 0.843 - - - - - ribosomal protein L30, pseudogene 3 [Source:MGI Symbol;Acc:MGI:1321401]
45. Nkrf ENSMUSG00000044149 445 0.843 0.843 - - - - - NF-kappaB repressing factor [Source:MGI Symbol;Acc:MGI:1924536]
46. Agpat9 43 0.843 0.843 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, transcript variant X4
47. Tom1l1 ENSMUSG00000020541 468 0.84 0.840 - - - - - target of myb1-like 1 (chicken) [Source:MGI Symbol;Acc:MGI:1919193]
48. Cacna1g ENSMUSG00000020866 225 0.839 0.839 - - - - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:MGI Symbol;Acc:MGI:1201678]
49. Gm15708 ENSMUSG00000086894 110 0.839 0.839 - - - - - predicted gene 15708 [Source:MGI Symbol;Acc:MGI:3783149]
50. Rep15 ENSMUSG00000040121 131 0.839 0.839 - - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
51. Cldn3 ENSMUSG00000070473 65 0.838 0.838 - - - - - claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]
52. Slc16a12 ENSMUSG00000009378 53 0.835 0.835 - - - - - solute carrier family 16 (monocarboxylic acid transporters), member 12 [Source:MGI Symbol;Acc:MGI:2147716]
53. Sqrdl 35 0.83 0.830 - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
54. Gys2 ENSMUSG00000030244 18 0.83 - - - 0.830 - - glycogen synthase 2 [Source:MGI Symbol;Acc:MGI:2385254]
55. Hist1h2ac ENSMUSG00000069270 72 0.829 0.829 - - - - - histone cluster 1, H2ac [Source:MGI Symbol;Acc:MGI:2448287]
56. Dock8 ENSMUSG00000052085 64 0.828 0.828 - - - - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
57. Zfp759 ENSMUSG00000057396 92 0.827 0.827 - - - - - zinc finger protein 759 [Source:MGI Symbol;Acc:MGI:2446280]
58. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 0.817 0.817 - - - - - predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
59. Hsd3b2 ENSMUSG00000063730 50 0.816 0.816 - - - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 [Source:MGI Symbol;Acc:MGI:96234]
60. Fam20c ENSMUSG00000025854 225 0.813 0.813 - - - - - family with sequence similarity 20, member C [Source:MGI Symbol;Acc:MGI:2136853]
61. Gm13157 258 0.813 0.813 - - - - - predicted gene 13157
62. Xpnpep2 ENSMUSG00000037005 28 0.811 0.811 - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:MGI Symbol;Acc:MGI:2180001]
63. Med12 ENSMUSG00000079487 20 0.81 0.810 - - - - - mediator complex subunit 12 [Source:MGI Symbol;Acc:MGI:1926212]
64. Echdc2 ENSMUSG00000028601 523 0.81 0.810 - - - - - enoyl Coenzyme A hydratase domain containing 2 [Source:MGI Symbol;Acc:MGI:1289238]
65. Crem ENSMUSG00000063889 328 0.808 0.808 - - - - - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
66. Chn2 ENSMUSG00000004633 550 0.805 0.805 - - - - - chimerin 2 [Source:MGI Symbol;Acc:MGI:1917243]
67. Izumo2 ENSMUSG00000066500 75 0.802 0.802 - - - - - IZUMO family member 2 [Source:MGI Symbol;Acc:MGI:1922760]
68. Pibf1 ENSMUSG00000022064 297 0.796 0.796 - - - - - progesterone immunomodulatory binding factor 1 [Source:MGI Symbol;Acc:MGI:1261910]
69. Reep6 ENSMUSG00000035504 305 0.794 - - - 0.794 - - receptor accessory protein 6 [Source:MGI Symbol;Acc:MGI:1917585]
70. Cgref1 ENSMUSG00000029161 42 0.791 0.791 - - - - - cell growth regulator with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:1915817]
71. Satb2 ENSMUSG00000038331 158 0.79 0.790 - - - - - special AT-rich sequence binding protein 2 [Source:MGI Symbol;Acc:MGI:2679336]
72. Acacb ENSMUSG00000042010 73 0.788 0.788 - - - - - acetyl-Coenzyme A carboxylase beta [Source:MGI Symbol;Acc:MGI:2140940]
73. Pdzd2 ENSMUSG00000022197 162 0.788 0.788 - - - - - PDZ domain containing 2 [Source:MGI Symbol;Acc:MGI:1922394]
74. Pgm3 ENSMUSG00000056131 59 0.787 0.787 - - - - - phosphoglucomutase 3 [Source:MGI Symbol;Acc:MGI:97566]
75. 9130011E15Rik 147 0.784 0.784 - - - - - RIKEN cDNA 9130011E15 gene, transcript variant X2
76. Spint1 ENSMUSG00000027315 154 0.784 0.784 - - - - - serine protease inhibitor, Kunitz type 1 [Source:MGI Symbol;Acc:MGI:1338033]
77. Klf1 ENSMUSG00000054191 97 0.782 - - - 0.782 - - Kruppel-like factor 1 (erythroid) [Source:MGI Symbol;Acc:MGI:1342771]
78. Tns4 ENSMUSG00000017607 125 0.78 0.780 - - - - - tensin 4 [Source:MGI Symbol;Acc:MGI:2144377]
79. Vamp5 ENSMUSG00000073002, ENSMUSG00000102671 369 0.779 - - - 0.779 - - vesicle-associated membrane protein 5 [Source:MGI Symbol;Acc:MGI:1858622]
80. Gm7221 Gm7221 22 0.776 0.776 - - - - -
81. Tssk4 ENSMUSG00000007591 75 0.774 0.774 - - - - - testis-specific serine kinase 4 [Source:MGI Symbol;Acc:MGI:1918349]
82. Hdac6 ENSMUSG00000031161 1000 0.773 0.773 - - - - - histone deacetylase 6 [Source:MGI Symbol;Acc:MGI:1333752]
83. Adcy4 ENSMUSG00000022220 245 0.769 0.769 - - - - - adenylate cyclase 4 [Source:MGI Symbol;Acc:MGI:99674]
84. Afap1l2 ENSMUSG00000025083 196 0.768 0.768 - - - - - actin filament associated protein 1-like 2 [Source:MGI Symbol;Acc:MGI:2147658]
85. Gm17354 ENSMUSG00000091985 68 0.766 0.766 - - - - - predicted gene, 17354 [Source:MGI Symbol;Acc:MGI:4936988]
86. Lnpep ENSMUSG00000023845 48 0.765 0.765 - - - - - leucyl/cystinyl aminopeptidase [Source:MGI Symbol;Acc:MGI:2387123]
87. Ap1m2 ENSMUSG00000003309 104 0.764 0.764 - - - - - adaptor protein complex AP-1, mu 2 subunit [Source:MGI Symbol;Acc:MGI:1336974]
88. 2610035D17Rik ENSMUSG00000087259 651 0.763 0.763 - - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
89. Hsd17b2 ENSMUSG00000031844 8 0.761 - - - 0.761 - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:1096386]
90. Hist3h2bb-ps ENSMUSG00000080712 2 0.76 - - - 0.760 - - histone cluster 3, H2bb, pseudogene [Source:MGI Symbol;Acc:MGI:1922442]
91. Zfp300 ENSMUSG00000031079 97 0.76 0.760 - - - - - zinc finger protein 300 [Source:MGI Symbol;Acc:MGI:3045326]
92. Treml4 ENSMUSG00000051682, ENSMUSG00000115900 2 0.76 - - - 0.760 - - triggering receptor expressed on myeloid cells-like 4 [Source:MGI Symbol;Acc:MGI:1923239]
93. Lrrc66 ENSMUSG00000067206 2 0.76 - - - 0.760 - - leucine rich repeat containing 66 [Source:MGI Symbol;Acc:MGI:2387634]
94. Gm22314 ENSMUSG00000088632 2 0.76 - - - 0.760 - - predicted gene, 22314 [Source:MGI Symbol;Acc:MGI:5452091]
95. Gm13342 ENSMUSG00000082516 112 0.76 - - - 0.760 - - predicted gene 13342 [Source:MGI Symbol;Acc:MGI:3650441]
96. Gbp6 ENSMUSG00000104713 7 0.76 - - - 0.760 - - guanylate binding protein 6 [Source:MGI Symbol;Acc:MGI:2140937]
97. Fcnb ENSMUSG00000026835 2 0.76 - - - 0.760 - - ficolin B [Source:MGI Symbol;Acc:MGI:1341158]
98. Sec14l3 ENSMUSG00000054986 2 0.76 - - - 0.760 - - SEC14-like lipid binding 3 [Source:MGI Symbol;Acc:MGI:3617848]
99. Gfi1 ENSMUSG00000029275 21 0.76 - - - 0.760 - - growth factor independent 1 [Source:MGI Symbol;Acc:MGI:103170]
100. Tmem71 ENSMUSG00000036944 2 0.76 - - - 0.760 - - transmembrane protein 71 [Source:MGI Symbol;Acc:MGI:2146049]

There are 74 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA