Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CXCR4

Gene Name Gene ID Reads Annotation
CXCR4 ENSGALG00000012357 1320 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]











Genes with expression patterns similar to CXCR4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CXCR4 ENSGALG00000012357 1320 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
2. RTN1 ENSGALG00000012006 2438 2.305 - - - - - 0.778 0.813 - - 0.714 reticulon 1 [Source:NCBI gene;Acc:378791]
3. DENND5B 4077 1.601 - - - - - 0.849 0.752 - - - DENN domain containing 5B, transcript variant X1
4. FABP7 ENSGALG00000038933 6780 1.572 - - - - - 0.847 - - - 0.725 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
5. HIGD1A ENSGALG00000030775 5724 1.55 - - - - - 0.811 - 0.739 - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
6. PCDH8 ENSGALG00000036258 1945 1.539 - - - - - 0.818 0.721 - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
7. Sep-03 Sep-03 109 1.528 - - - - - 0.782 - - - 0.746
8. NEFL ENSGALG00000000314 4883 1.516 - - - - - 0.743 - - - 0.773 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
9. MSX2 ENSGALG00000038848 6950 1.507 - - - - - 0.712 - 0.795 - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
10. NEFM ENSGALG00000000317 6992 1.452 - - - - - 0.748 - - - 0.704 neurofilament medium [Source:NCBI gene;Acc:396206]
11. ZIC3 ENSGALG00000031144 863 0.916 - - - - - 0.916 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
12. GHOX-7 GHOX-7 2555 0.915 - - - - - 0.915 - - - -
13. DRAXIN ENSGALG00000004631 3122 0.909 - - - - - 0.909 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
14. LFNG ENSGALG00000038515 5178 0.906 - - - - - 0.906 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
15. TRABD2A ENSGALG00000026395 704 0.9 - - - - - 0.900 - - - - TraB domain containing 2A, transcript variant X3
16. WNT4 ENSGALG00000041708 1277 0.898 - - - - - 0.898 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
17. ZIC1 ENSGALG00000040532 6543 0.891 - - - - - 0.891 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
18. LRRC4C ENSGALG00000007948 9 0.88 - - - - - 0.880 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
19. BMP7 ENSGALG00000007668 6645 0.878 - - - - - 0.878 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
20. ELOVL4 ENSGALG00000015876 853 0.878 - - - - - 0.878 - - - - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
21. ISM1 ENSGALG00000009042 196 0.877 - - - - - 0.877 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
22. BAALC ENSGALG00000045617 850 0.862 - - - - - - - 0.862 - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
23. LIPG ENSGALG00000043734 2490 0.857 - - - - - 0.857 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
24. NSG1 ENSGALG00000015010 5829 0.85 - - - - - 0.850 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
25. GABRA3 ENSGALG00000007269 985 0.848 - - - - - 0.848 - - - - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
26. GNG10 ENSGALG00000015683 6905 0.845 - - - - - 0.845 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
27. PAX3 ENSGALG00000030944 2987 0.841 - - - - - 0.841 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
28. NPAS3 ENSGALG00000029022 1950 0.831 - - - - - 0.831 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
29. ZBTB2 ENSGALG00000012966 112 0.826 - - - - - 0.826 - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
30. SRGAP3 ENSGALG00000008378 4331 0.824 - - - - - 0.824 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
31. CLEC18B ENSGALG00000027183 284 0.823 - - - - - 0.823 - - - - C-type lectin domain family 18 member B, transcript variant X2
32. SLC7A11 ENSGALG00000009758 104 0.821 - - - - - 0.821 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
33. MYL4 ENSGALG00000000585 16982 0.815 - - - - - 0.815 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
34. KCNK1 ENSGALG00000011005 1643 0.812 - - - - - - - 0.812 - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
35. BTBD17 ENSGALG00000023359 87 0.809 - - - - - 0.809 - - - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
36. FZD3 ENSGALG00000042308 3356 0.803 - - - - - 0.803 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
37. ADCY8 ENSGALG00000030251 40 0.801 - - - - - 0.801 - - - - adenylate cyclase 8 [Source:HGNC Symbol;Acc:HGNC:239]
38. JAM2 ENSGALG00000015746 514 0.796 - - - - - 0.796 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
39. CHST1 ENSGALG00000008440 156 0.795 - - - - - 0.795 - - - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
40. PRRX1 ENSGALG00000003324 4859 0.793 - - - - - - - 0.793 - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
41. CRABP-I ENSGALG00000003193 67258 0.791 - - - - - 0.791 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
42. AXIN2 ENSGALG00000039200 2333 0.791 - - - - - 0.791 - - - - axin 2 [Source:NCBI gene;Acc:395152]
43. LSAMP ENSGALG00000040620 2226 0.787 - - - - - - - 0.787 - - limbic system-associated membrane protein [Source:NCBI gene;Acc:395687]
44. CFTR ENSGALG00000032986 424 0.787 - - - - - 0.787 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
45. SLC1A3 ENSGALG00000003582 2283 0.785 - - - - - - 0.785 - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
46. SCML4 ENSGALG00000015309 499 0.784 - - - - - - - - - 0.784 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
47. ZFAND5 ENSGALG00000015144 9053 0.781 - - - - - - - 0.781 - - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
48. ENSGALG00000026351 ENSGALG00000026351 49 0.78 - - - - - 0.780 - - - -
49. DLL1 ENSGALG00000011182 1613 0.78 - - - - - 0.780 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
50. RASSF2 ENSGALG00000030432 4822 0.78 - - - - - 0.780 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
51. SLC10A4 ENSGALG00000033908 300 0.78 - - - - - - - - - 0.780 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
52. EF1A EF1A 2378 0.776 - - - - - - - - - 0.776
53. STMN2 ENSGALG00000039690 989 0.775 - - - - - - - - - 0.775 stathmin 2 [Source:NCBI gene;Acc:396095]
54. ERMN ENSGALG00000020575 46 0.773 - - - - - 0.773 - - - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
55. AMDHD2 ENSGALG00000009234 1730 0.773 - - - - - - 0.773 - - - Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
56. PLCH2 ENSGALG00000001207 7 0.772 - - - - - 0.772 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
57. MAK ENSGALG00000012770 32 0.772 - - - - - 0.772 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
58. SFRP2 ENSGALG00000009241 4716 0.772 - - - - - - 0.772 - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
59. SMPD3 ENSGALG00000034950 4335 0.769 - - - - - 0.769 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
60. GUCY1A3 718 0.769 - - - - - - 0.769 - - - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
61. FASN ENSGALG00000040896 17372 0.768 - - - - - 0.768 - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
62. TFAP2C ENSGALG00000007690 768 0.768 - - - - - 0.768 - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
63. MMD2 ENSGALG00000004530 167 0.764 - - - - - 0.764 - - - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
64. TOX ENSGALG00000039102 1434 0.764 - - - - - - 0.764 - - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
65. ZBTB18 ENSGALG00000010705 3433 0.763 - - - - - - - - - 0.763 zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
66. CERCAM ENSGALG00000004986 5158 0.762 - - - - - 0.762 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
67. MURC 3759 0.761 - - - - - 0.761 - - - - muscle related coiled-coil protein
68. NDNF ENSGALG00000011962 2261 0.76 - - - - - - - 0.760 - - neuron-derived neurotrophic factor, transcript variant X4
69. C17orf75 ENSGALG00000003434 4262 0.759 - - - - - 0.759 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
70. MAP3K8 ENSGALG00000007356 188 0.757 - - - - - - - 0.757 - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
71. CCDC6 ENSGALG00000003165 93 0.756 - - - - - 0.756 - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
72. DAB2IP ENSGALG00000001419 100 0.755 - - - - - 0.755 - - - - DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
73. PTBP2 ENSGALG00000005552 3443 0.752 - - - - - 0.752 - - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
74. TMEM181 ENSGALG00000013737 19 0.75 - - - - - 0.750 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
75. ENSGALG00000024369 ENSGALG00000024369 4 0.75 - - - - - 0.750 - - - -
76. SMIM10 SMIM10 2 0.75 - - - - - 0.750 - - - -
77. ACPP ENSGALG00000043415 4 0.75 - - - - - 0.750 - - - - acid phosphatase, prostate, transcript variant X2
78. TRAF1 ENSGALG00000001583 3 0.75 - - - - - 0.750 - - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
79. SHANK2 ENSGALG00000035916 9 0.75 - - - - - 0.750 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
80. SRPX2 ENSGALG00000006796 32 0.75 - - - - - 0.750 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
81. CLDN19 ENSGALG00000023580 1 0.75 - - - - - 0.750 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
82. INHBB ENSGALG00000028770 2 0.75 - - - - - 0.750 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
83. WNT3 ENSGALG00000001079 8 0.75 - - - - - 0.750 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
84. VWA3B ENSGALG00000040709 5 0.75 - - - - - 0.750 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
85. DPF3 ENSGALG00000009352 7 0.75 - - - - - 0.750 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
86. RAB4A ENSGALG00000036218 20 0.75 - - - - - 0.750 - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
87. ANKFN1 ENSGALG00000003105 15 0.75 - - - - - 0.750 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
88. BAP1 ENSGALG00000004366 12 0.75 - - - - - 0.750 - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
89. SLC38A7 ENSGALG00000002313 25 0.75 - - - - - 0.750 - - - - solute carrier family 38 member 7, transcript variant X5
90. ITGAV ENSGALG00000002655 26 0.75 - - - - - 0.750 - - - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
91. ENSGALG00000025912 ENSGALG00000025912 4 0.75 - - - - - 0.750 - - - -
92. VTG1 ENSGALG00000039354 17 0.75 - - - - - 0.750 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
93. CREB3 ENSGALG00000002523 23 0.75 - - - - - 0.750 - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
94. TMEM201 ENSGALG00000002527 2 0.75 - - - - - 0.750 - - - - transmembrane protein 201
95. PEX26 ENSGALG00000019286 1 0.75 - - - - - 0.750 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
96. ABI3BP ENSGALG00000015307 4 0.75 - - - - - 0.750 - - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
97. BCMO1 BCMO1 35 0.75 - - - - - 0.750 - - - -
98. KCNQ3 ENSGALG00000037626 6 0.75 - - - - - 0.750 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
99. OLIG3 ENSGALG00000013862 51 0.75 - - - - - 0.750 - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
100. ENSGALG00000006495 ENSGALG00000006495 4 0.75 - - - - - 0.750 - - - -

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA