Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CXCL12

Gene Name Gene ID Reads Annotation
CXCL12 ENSGALG00000041346 4128 C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]











Genes with expression patterns similar to CXCL12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CXCL12 ENSGALG00000041346 4128 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
2. MATR3 ENSGALG00000002478 12793 0.996 - - - - - - 0.996 - - - matrin 3 [Source:NCBI gene;Acc:373948]
3. RAB12 ENSGALG00000033608 14160 0.996 - - - - - - 0.996 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
4. Sep-06 Sep-06 5961 0.996 - - - - - - 0.996 - - -
5. FAM192A ENSGALG00000021473 10213 0.996 - - - - - - 0.996 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
6. USPL1 ENSGALG00000017079 6263 0.996 - - - - - - 0.996 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
7. C9orf64 ENSGALG00000012589 6097 0.995 - - - - - - 0.995 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
8. RNF141 ENSGALG00000029586 4962 0.995 - - - - - - 0.995 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
9. HDAC8 ENSGALG00000004825 12066 0.995 - - - - - - 0.995 - - - histone deacetylase 8, transcript variant X2
10. EIF1B ENSGALG00000038646 9508 0.995 - - - - - - 0.995 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
11. ZEB1 ENSGALG00000007260 9277 0.995 - - - - - - 0.995 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
12. FAT1 ENSGALG00000013579 6030 0.995 - - - - - - 0.995 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
13. EFTUD2 ENSGALG00000000988 17913 0.994 - - - - - - 0.994 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
14. EIF3D ENSGALG00000012529 40887 0.994 - - - - - - 0.994 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
15. MCM3 ENSGALG00000016676 16934 0.994 - - - - - - 0.994 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
16. CORO1C ENSGALG00000004901 7055 0.994 - - - - - - 0.994 - - - coronin 1C [Source:NCBI gene;Acc:416893]
17. VSX1 ENSGALG00000037576 1517 0.994 - - - - - - 0.994 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
18. CCNYL1 ENSGALG00000008485 11958 0.994 - - - - - - 0.994 - - - cyclin Y like 1
19. DAPK3 ENSGALG00000037733 6215 0.994 - - - - - - 0.994 - - - death-associated protein kinase 3, transcript variant X2
20. WDHD1 ENSGALG00000012199 3570 0.994 - - - - - - 0.994 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
21. LRPAP1 ENSGALG00000015612 3526 0.994 - - - - - - 0.994 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
22. CTBPL ENSGALG00000007642 14238 0.993 - - - - - - 0.993 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
23. GPC1 ENSGALG00000040316 13364 0.993 - - - - - - 0.993 - - - glypican 1 [Source:NCBI gene;Acc:424770]
24. SLC9A3R1 ENSGALG00000007650 13053 0.992 - - - - - - 0.992 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
25. ARHGAP32 ENSGALG00000043511 7916 0.992 - - - - - - 0.992 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
26. TMEM18 ENSGALG00000028744 11779 0.992 - - - - - - 0.992 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
27. CNOT6 ENSGALG00000034316 10496 0.991 - - - - - - 0.991 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
28. INTS4 ENSGALG00000000091 5965 0.991 - - - - - - 0.991 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
29. MCM6 ENSGALG00000012348 12523 0.99 - - - - - - 0.990 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
30. C15H12ORF49 C15H12ORF49 13250 0.99 - - - - - - 0.990 - - -
31. DNAJC7 ENSGALG00000042796 14597 0.989 - - - - - - 0.989 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
32. IFT20 ENSGALG00000005707 23973 0.988 - - - - - - 0.988 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
33. UBE2L3 ENSGALG00000036739 21401 0.986 - - - - - - 0.986 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
34. RAP1B ENSGALG00000009927 26562 0.986 - - - - - - 0.986 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
35. DHFR ENSGALG00000026757 18478 0.984 - - - - - - 0.984 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
36. LRPPRC ENSGALG00000009967 17091 0.982 - - - - - - 0.982 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
37. PDLIM4 ENSGALG00000039872 7823 0.981 - - - - - - 0.981 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
38. PPIG ENSGALG00000009839 24114 0.98 - - - - - - 0.980 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
39. ZNF644 ENSGALG00000034253 28348 0.979 - - - - - - 0.979 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
40. CDCA4 ENSGALG00000011692 10381 0.978 - - - - - - 0.978 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
41. HNRNPH3 ENSGALG00000003947 28724 0.978 - - - - - - 0.978 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
42. SMARCE1 ENSGALG00000003882 49063 0.972 - - - - - - 0.972 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
43. HNRNPM ENSGALG00000000377 40684 0.954 - - - - - - 0.954 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
44. ZFAND5 ENSGALG00000015144 9053 0.855 - - - - - - - 0.855 - - zinc finger AN1-type containing 5 [Source:NCBI gene;Acc:427254]
45. LBH ENSGALG00000009052 5545 0.844 - - - - - - - 0.844 - - limb bud and heart development [Source:NCBI gene;Acc:421301]
46. IGSF21 ENSGALG00000037479 1105 0.828 - - - - - - - 0.828 - - immunoglobin superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:28246]
47. LUM ENSGALG00000011271 44020 0.826 - - - - - - 0.826 - - - lumican [Source:NCBI gene;Acc:417891]
48. MSX2 ENSGALG00000038848 6950 0.818 - - - - - - - 0.818 - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
49. SUB1 ENSGALG00000003248 56412 0.794 - - - - - - 0.794 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
50. RPL3 ENSGALG00000012172 118287 0.787 - - - - - - 0.787 - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
51. BMP6 ENSGALG00000012787 1077 0.786 - - - - - - - 0.786 - - bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]
52. PGM5 ENSGALG00000014995 1238 0.783 - - - - - - - - - 0.783 phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]
53. BAALC ENSGALG00000045617 850 0.775 - - - - - - - 0.775 - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
54. ANLN 10479 0.773 - - - - - - - 0.773 - - anillin actin binding protein, transcript variant X2
55. OPRM1 ENSGALG00000013616 125 0.771 - - - - - - - 0.771 - - opioid receptor mu 1 [Source:HGNC Symbol;Acc:HGNC:8156]
56. LOC417741 ENSGALG00000008635 594 0.77 - - - - - - - 0.770 - - secreted frizzled-related protein 2-like
57. TUSC1 22 0.769 - - - - - - - - - 0.769 tumor suppressor candidate 1
58. TTPA ENSGALG00000030031 500 0.767 - - - - - - - 0.767 - - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
59. LRRC71 ENSGALG00000027351 695 0.763 - - - - - - - 0.763 - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
60. TGFB2 ENSGALG00000009612 10223 0.762 - - - - - - - 0.762 - - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
61. ELMOD1 ENSGALG00000017169 2303 0.756 - - - - - - - 0.756 - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
62. TNC ENSGALG00000039990 3758 0.749 - - - - - - - - 0.749 - tenascin C [Source:NCBI gene;Acc:396440]
63. GATA5 ENSGALG00000005352 11876 0.747 - - - - - - - 0.747 - - GATA binding protein 5 [Source:NCBI gene;Acc:396391]
64. NUDT7 ENSGALG00000034395 7396 0.746 - - - - - - 0.746 - - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
65. KCNK1 ENSGALG00000011005 1643 0.745 - - - - - - - 0.745 - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
66. HIGD1A ENSGALG00000030775 5724 0.742 - - - - - - - 0.742 - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
67. FRMD4B ENSGALG00000037791 2457 0.74 - - - - - - - 0.740 - - FERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]
68. SUCLA2 ENSGALG00000016993 4735 0.738 - - - - - - - 0.738 - - succinate-CoA ligase ADP-forming beta subunit [Source:NCBI gene;Acc:418857]
69. DLX5 ENSGALG00000009129 1395 0.737 - - - - - - - 0.737 - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
70. RDH10 ENSGALG00000034346 15285 0.733 - - - - - - - - - 0.733 retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
71. NDNF ENSGALG00000011962 2261 0.73 - - - - - - - 0.730 - - neuron-derived neurotrophic factor, transcript variant X4
72. FXN ENSGALG00000015108 1867 0.728 - - - - - - - - - 0.728 frataxin [Source:HGNC Symbol;Acc:HGNC:3951]
73. STRA6 ENSGALG00000001449 8248 0.727 - - - - - - - 0.727 - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
74. ALDH1A2 ENSGALG00000004270 49483 0.727 - - - - - 0.727 - - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
75. FAR-1 FAR-1 1855 0.726 - - - - - - - 0.726 - -
76. FGF7 ENSGALG00000028158 189 0.725 - - - - - - - 0.725 - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
77. SMOC2 ENSGALG00000011205 340 0.719 - - - - - - - - - 0.719 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
78. GHOX-7 GHOX-7 2555 0.718 - - - - - - - 0.718 - -
79. ALX-4 ALX-4 2351 0.714 - - - - - 0.714 - - - -
80. NCBP2_1 ENSGALG00000006843 7170 0.713 - - - - - - - 0.713 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
81. TOX2 ENSGALG00000003106 2472 0.713 - - - - - 0.713 - - - - TOX high mobility group box family member 2, transcript variant X1
82. TMEM39B ENSGALG00000003287 4125 0.712 - - - - - - - 0.712 - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
83. NNT ENSGALG00000014869 8496 0.71 - - - - - - - 0.710 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
84. ENSGALG00000024441 ENSGALG00000024441 66 0.708 - - - - - - - - 0.708 -
85. PPAPDC1A PPAPDC1A 2790 0.707 - - - - - - - 0.707 - -
86. ENSGALG00000027002 ENSGALG00000027002 7570 0.706 - - - - - - - 0.706 - -
87. WT1 ENSGALG00000012115 3935 0.703 - - - - - 0.703 - - - - Wilms tumor 1 [Source:NCBI gene;Acc:101747322]
88. CADM1 ENSGALG00000014582 32973 0.703 - - 0.703 - - - - - - - cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]
89. TXNRD3 ENSGALG00000039363 8016 0.703 - - - - - - - 0.703 - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
90. DNAJA4 ENSGALG00000036850 6847 0.702 - - - - - - - 0.702 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
91. TBX18 ENSGALG00000032789 1768 0.702 - - - - - 0.702 - - - - T-box 18 [Source:NCBI gene;Acc:395104]
92. TRABD2B ENSGALG00000027655 1090 0.701 - - - - - - - - - 0.701 TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
93. GPX3 ENSGALG00000004521 10856 0.7 - - - - - 0.700 - - - - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
94. INTS1 ENSGALG00000004104 950 0.7 - - - - - - - - - 0.700 integrator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24555]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA