Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CX3CR1

Gene Name Gene ID Reads Annotation
CX3CR1 ENSGALG00000038000 48 C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]











Genes with expression patterns similar to CX3CR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CX3CR1 ENSGALG00000038000 48 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
2. TMCO4 ENSGALG00000004081 31 1.583 - - - - - - 0.750 0.833 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
3. EVI2A ENSGALG00000039084 13 0.972 - - - - - - 0.972 - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
4. NRP2 ENSGALG00000008621 29 0.918 - - - - - - - 0.918 - - neuropilin 2 [Source:NCBI gene;Acc:374157]
5. CHRNA5 ENSGALG00000003021 83 0.893 - - - - - - - 0.893 - - cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]
6. SYCP3 ENSGALG00000012766 70 0.887 - - - - - - - 0.887 - - synaptonemal complex protein 3, transcript variant X2
7. SUSD4 ENSGALG00000009388 48 0.873 - - - - - - 0.873 - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
8. TNFRSF18 ENSGALG00000001882 12 0.858 - - - - - - - - - 0.858 TNF receptor superfamily member 18 [Source:NCBI gene;Acc:419424]
9. DNASE1L3 386 0.853 - - - - - - - 0.853 - - deoxyribonuclease 1 like 3
10. EPHB6 ENSGALG00000014749 30 0.85 - - - - - - - 0.850 - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
11. GRIK3 ENSGALG00000002098 111 0.849 - - - - - - - 0.849 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
12. ICOS ENSGALG00000008656 27 0.84 - - - - - - - 0.840 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
13. DCAF10 ENSGALG00000005390 214 0.839 - - - - - - - 0.839 - - DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:HGNC:23686]
14. FOXP4 ENSGALG00000033497 13 0.836 - - - - - - - 0.836 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
15. PLB1 PLB1 101 0.836 - - - - - - - 0.836 - -
16. STAB1 21 0.836 - - - - - - - 0.836 - - stabilin 1, transcript variant X2
17. ENSGALG00000019053 ENSGALG00000019053 8 0.836 - - - - - - - 0.836 - -
18. APOAIV APOAIV 5 0.836 - - - - - - - 0.836 - -
19. GINS3 ENSGALG00000031209 32 0.836 - - - - - - - 0.836 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
20. CCDC96 9 0.836 - - - - - - - 0.836 - - coiled-coil domain containing 96
21. USP53 ENSGALG00000011990 12 0.835 - - - - - - - 0.835 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
22. SDR42E2 ENSGALG00000006964 57 0.835 - - - - - - - 0.835 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
23. KRT20 ENSGALG00000019716 11 0.834 - - - - - - - 0.834 - - keratin 20 [Source:NCBI gene;Acc:420045]
24. GFAP ENSGALG00000000909 21 0.834 - - - - - - - 0.834 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
25. COL12A1 ENSGALG00000015908 1300 0.834 - - - - - - - 0.834 - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
26. DNAI2 ENSGALG00000004495 45 0.833 - - - - - - - 0.833 - - dynein axonemal intermediate chain 2
27. MMP23B ENSGALG00000001392 53 0.833 - - - - - - - - - 0.833 matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
28. MAPT ENSGALG00000000625 659 0.833 - - - - - - - 0.833 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
29. IL10R1 IL10R1 9 0.831 - - - - - - - - - 0.831
30. INA ENSGALG00000028238 208 0.831 - - - - - - - 0.831 - - internexin neuronal intermediate filament protein alpha
31. CD4 ENSGALG00000014477 19 0.83 - - - - - - - 0.830 - - CD4 molecule [Source:NCBI gene;Acc:395362]
32. ZIC3 ENSGALG00000031144 863 0.828 - - - - - - - 0.828 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
33. TRPV1 ENSGALG00000004649 17 0.827 - - - 0.827 - - - - - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
34. ANKRD44 ENSGALG00000007996 17 0.826 - - - - - - - 0.826 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
35. KCTD14 ENSGALG00000017266 31 0.825 - - - - - - - 0.825 - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
36. ABCA8 ENSGALG00000021399 11 0.825 - - - - - - - 0.825 - - ATP binding cassette subfamily A member 8
37. PAK2 ENSGALG00000006426 283 0.823 - - - - - - - 0.823 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
38. KLRD1 ENSGALG00000014722 27 0.823 - - - - - - - 0.823 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
39. SEMA4D ENSGALG00000010697 10 0.822 - - - - - - - - - 0.822 semaphorin 4D [Source:NCBI gene;Acc:396331]
40. SGK196 SGK196 83 0.82 - - - - - - - 0.820 - -
41. LOC417973 ENSGALG00000019325 9 0.819 - - - - - - - 0.819 - - uncharacterized LOC417973, transcript variant X1
42. RIPK4 ENSGALG00000040189 102 0.819 - - - - - - - 0.819 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
43. IRG1 IRG1 21 0.819 - - - - - - - 0.819 - -
44. AQP12 AQP12 11 0.818 - - - - - - - 0.818 - -
45. HAVCR1 ENSGALG00000017362 25 0.815 - - - - - - - 0.815 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
46. KIAA0513 ENSGALG00000025938 46 0.813 - - - - - - - 0.813 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
47. FAM83B ENSGALG00000016299 17 0.813 - - - - - - - - - 0.813 family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
48. AS3MT ENSGALG00000008133 795 0.809 - - - - - - - 0.809 - - arsenite methyltransferase [Source:HGNC Symbol;Acc:HGNC:17452]
49. NXPH2 ENSGALG00000029083 353 0.809 - - - - - - - 0.809 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
50. TOR4A ENSGALG00000008623 1364 0.808 - - - - - - - 0.808 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
51. KCNE3 ENSGALG00000022696 561 0.808 - - - - - - - - - 0.808 potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
52. NDUFV1 ENSGALG00000042809 6222 0.807 - - - - - - - 0.807 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
53. NRIP3 ENSGALG00000005903 58 0.807 - - - - - - - 0.807 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
54. PTPRD ENSGALG00000015058 37 0.804 - - - - - - - 0.804 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
55. ENPP3 ENSGALG00000037587 25 0.803 - - - - - - - 0.803 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
56. CCDC50 ENSGALG00000020813 739 0.803 - - - - - - - 0.803 - - coiled-coil domain containing 50 [Source:NCBI gene;Acc:424906]
57. EPB41L4A ENSGALG00000000234 113 0.802 - - - - - - - 0.802 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
58. ENSGALG00000020578 ENSGALG00000020578 25 0.801 - - - - 0.801 - - - - -
59. ENSGALG00000019522 ENSGALG00000019522 122 0.8 - - - - - - - 0.800 - -
60. RNASET2 ENSGALG00000011426 40 0.796 - - - - - - - 0.796 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
61. SNAP23 ENSGALG00000009097 36 0.796 - - - - - - - 0.796 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
62. STXBP1 ENSGALG00000040003 157 0.796 - - - - - - - 0.796 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
63. ATP6V1H ENSGALG00000013621 13 0.795 - - - - - - - - - 0.795 ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
64. ENSGALG00000023731 ENSGALG00000023731 149 0.793 - - - - - - - 0.793 - -
65. DZANK1 ENSGALG00000008731 120 0.789 - - - - - - - 0.789 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
66. HAAO ENSGALG00000009926 6 0.788 - - - - - - - - - 0.788 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
67. NMU ENSGALG00000020151 29 0.788 - - - - - - - - - 0.788 neuromedin U [Source:NCBI gene;Acc:422748]
68. SLC4A5 ENSGALG00000032146 3 0.788 - - - - - - - - - 0.788 solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
69. GTSF1 ENSGALG00000001109 15 0.788 - - - - - - - - - 0.788 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:HGNC:26565]
70. RHOC ENSGALG00000001569 53 0.788 - - - - - - - - - 0.788 ras homolog family member C [Source:NCBI gene;Acc:395869]
71. ENSGALG00000008598 ENSGALG00000008598 2 0.788 - - - - - - - - - 0.788
72. SLC2A1 ENSGALG00000004889 10 0.788 - - - - - - - - - 0.788 solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
73. KLHL35 ENSGALG00000017332 1 0.788 - - - - - - - - - 0.788 kelch like family member 35 [Source:HGNC Symbol;Acc:HGNC:26597]
74. AHR2 ENSGALG00000023742 21 0.788 - - - - - - - - - 0.788 Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
75. VSTM2A ENSGALG00000041764 2 0.788 - - - - - - - - - 0.788 V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
76. LY96 ENSGALG00000032701 18 0.788 - - - - - - - - - 0.788 lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
77. IL8 ENSGALG00000026098 16 0.788 - - - - - - - - - 0.788 interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
78. ENSGALG00000026135 ENSGALG00000026135 16 0.788 - - - - - - - - - 0.788
79. ENSGALG00000014502 ENSGALG00000014502 2 0.788 - - - - - - - - - 0.788
80. GPR83 ENSGALG00000017212 6 0.788 - - - - - - - - - 0.788 G protein-coupled receptor 83 [Source:NCBI gene;Acc:428093]
81. TLR7 ENSGALG00000016590 6 0.788 - - - - - - - - - 0.788 toll like receptor 7 [Source:NCBI gene;Acc:418638]
82. ENSGALG00000026169 ENSGALG00000026169 30 0.788 - - - - - - - - - 0.788
83. CD38 ENSGALG00000014508 3 0.788 - - - - - - - - - 0.788 CD38 molecule [Source:NCBI gene;Acc:422827]
84. ENSGALG00000019640 ENSGALG00000019640 2 0.788 - - - - - - - - - 0.788
85. ANKS3 ENSGALG00000000643 2 0.788 - - - - - - - - - 0.788 ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
86. CCDC178 6 0.788 - - - - - - - - - 0.788 coiled-coil domain containing 178, transcript variant X3
87. PRSS35 ENSGALG00000015847 52 0.787 - - - - - - - 0.787 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
88. GNG11 ENSGALG00000029899 327 0.785 - - - - - - - 0.785 - - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
89. SMYD1 ENSGALG00000015935 75 0.783 - - - - - - - 0.783 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
90. ENSGALG00000021882 ENSGALG00000021882 63 0.782 - - - - - - - 0.782 - -
91. ABCC4 ENSGALG00000016896 154 0.782 - - - - - - - 0.782 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
92. ENSGALG00000027201 ENSGALG00000027201 12 0.782 - - - - - - - - - 0.782
93. FXR FXR 52 0.782 - - - - - - - - - 0.782
94. ABCC6 ENSGALG00000038152 55 0.781 - - 0.781 - - - - - - - ATP binding cassette subfamily C member 6 [Source:NCBI gene;Acc:416600]
95. MYO16 ENSGALG00000016837 1381 0.781 - - - - - 0.781 - - - - myosin XVI [Source:HGNC Symbol;Acc:HGNC:29822]
96. CACNA2D2 ENSGALG00000038242 2078 0.781 - - - - - - - 0.781 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
97. CYP46A1 ENSGALG00000011162 519 0.781 - - - - - - - 0.781 - - cytochrome P450 family 46 subfamily A member 1 [Source:NCBI gene;Acc:423450]
98. SLIT3 ENSGALG00000001916 738 0.781 - - - - - - - 0.781 - - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
99. ENSGALG00000028962 ENSGALG00000028962 7 0.779 - - - - - - - - - 0.779
100. FAM219A ENSGALG00000005821 52 0.778 - - - - - - - 0.778 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]

There are 101 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA