Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CUX2

Gene Name Gene ID Reads Annotation
CUX2 ENSGALG00000004598 231 cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]











Genes with expression patterns similar to CUX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CUX2 ENSGALG00000004598 231 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
2. CCSAP ENSGALG00000011084 566 1.624 - - 0.760 - - - - - 0.864 - centriole, cilia and spindle associated protein [Source:HGNC Symbol;Acc:HGNC:29578]
3. TBX18 ENSGALG00000032789 1768 1.622 - - - - - - - - 0.837 0.785 T-box 18 [Source:NCBI gene;Acc:395104]
4. SH3TC1 ENSGALG00000015568 484 1.578 - - 0.730 - - - - - 0.848 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
5. CNFI-A4 CNFI-A4 128 1.502 - - 0.785 - - - - - 0.717 -
6. TBK1 ENSGALG00000009840 1650 1.474 - - 0.718 - - - - - 0.756 - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
7. FAM120B ENSGALG00000011180 101 0.966 - - - - - - - - 0.966 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
8. ALMS1 ENSGALG00000044620 570 0.962 - - - - - - - - 0.962 - ALMS1, centrosome and basal body associated protein, transcript variant X1
9. ODZ2 ODZ2 1380 0.958 - - - - - - - - 0.958 -
10. ENSGALG00000026919 ENSGALG00000026919 301 0.955 - - - - - - - - 0.955 -
11. FDFT1 ENSGALG00000016665 3053 0.951 - - - - - - - - 0.951 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
12. KLHL15 ENSGALG00000016345 1638 0.949 - - - - - - - - 0.949 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
13. PCLO 249 0.946 - - - - - - - - 0.946 - piccolo presynaptic cytomatrix protein
14. KIAA1217 ENSGALG00000007766 144 0.946 - - - - - - - - 0.946 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
15. NRXN1 ENSGALG00000009107 277 0.942 - - - - - - - - 0.942 - neurexin 1 [Source:NCBI gene;Acc:395398]
16. CARS2 ENSGALG00000016847 3814 0.94 - - - - - - - - 0.940 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
17. RHPN2 ENSGALG00000004814 1865 0.94 - - - - - - - - 0.940 - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
18. PRDM15 ENSGALG00000019178 2729 0.94 - - - - - - - - 0.940 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
19. FLRT3 ENSGALG00000008716 593 0.934 - - - - - - - - 0.934 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
20. PARP3 ENSGALG00000004517 331 0.927 - - - - - - - - 0.927 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
21. FASTKD3 ENSGALG00000033521 1186 0.926 - - - - - - - - 0.926 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
22. SPATA5L1 ENSGALG00000005682 240 0.926 - - - - - - - - 0.926 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
23. PDXDC1 ENSGALG00000034829 406 0.924 - - - - - - - - 0.924 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
24. ELL2 ENSGALG00000014678 1111 0.924 - - - - - - - - 0.924 - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
25. ABCC8 ENSGALG00000006172 41 0.922 - - - - - - - - 0.922 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
26. LHCGR ENSGALG00000009095 174 0.921 - - - - - - - - 0.921 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
27. CAMKK1 ENSGALG00000001617 64 0.921 - - - - - - - - 0.921 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
28. RBBP8 ENSGALG00000014982 3255 0.92 - - - - - - - - 0.920 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
29. XPOT ENSGALG00000009835 2953 0.92 - - - - - - - - 0.920 - exportin for tRNA [Source:NCBI gene;Acc:417824]
30. SNCAIP ENSGALG00000005330 2425 0.92 - - - - - - - - 0.920 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
31. LRRC59 ENSGALG00000007673 2081 0.919 - - - - - - - - 0.919 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
32. MDN1 ENSGALG00000015733 2352 0.918 - - - - - - - - 0.918 - midasin AAA ATPase 1, transcript variant X1
33. SMAP2 ENSGALG00000029244 498 0.916 - - - - - - - - 0.916 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
34. FGD5 ENSGALG00000008546 4031 0.915 - - - - - - - - 0.915 - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
35. VWF ENSGALG00000017272 1012 0.915 - - - - - - - - 0.915 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
36. DTX3L ENSGALG00000012075 399 0.915 - - - - - - - - 0.915 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
37. C7 ENSGALG00000014835 322 0.911 - - - - - - - - 0.911 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
38. RAD17 ENSGALG00000015571 1374 0.91 - - - - - - - - 0.910 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
39. CHRNA7 ENSGALG00000004096 107 0.91 - - - - - - - - 0.910 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
40. SH3D19 ENSGALG00000010081 52 0.908 - - - - - - - - 0.908 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
41. DCP1B 1306 0.907 - - - - - - - - 0.907 - decapping mRNA 1B
42. RFFL ENSGALG00000002225 928 0.907 - - - - - - - - 0.907 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
43. PDZRN4 ENSGALG00000009530 832 0.907 - - - - - - - - 0.907 - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
44. GALM ENSGALG00000013828 1546 0.907 - - - - - - - - 0.907 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
45. TMEM74 ENSGALG00000041553 398 0.907 - - - - - - - - 0.907 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]
46. BACH1 ENSGALG00000015828 114 0.906 - - - - - - - - 0.906 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
47. MARVELD2 ENSGALG00000027140 828 0.906 - - - - - - - - 0.906 - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
48. MTSS1 ENSGALG00000041969 1312 0.906 - - - - - - - - 0.906 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
49. NTL ENSGALG00000005156 278 0.903 - - - - - - - - 0.903 - neurotrypsin-like, transcript variant X7
50. MIB1 ENSGALG00000014974 3583 0.902 - - - - - - - - 0.902 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
51. SBNO2 ENSGALG00000037522 1546 0.9 - - - - - - - - 0.900 - strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]
52. L3HYPDH ENSGALG00000012011 2212 0.899 - - - - - - - - 0.899 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
53. FLOT2 ENSGALG00000031216 1003 0.898 - - - - - - - - 0.898 - flotillin 2 [Source:NCBI gene;Acc:417579]
54. RUFY2 1442 0.898 - - - - - - - - 0.898 - RUN and FYVE domain containing 2, transcript variant X1
55. SLC45A3 ENSGALG00000000703 85 0.898 - - - - - - - - 0.898 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
56. TOM1L2 ENSGALG00000004902 89 0.896 - - - - - - - - 0.896 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
57. CEP112 ENSGALG00000034989 123 0.896 - - - - - - - - 0.896 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
58. MAP3K5 ENSGALG00000013892 565 0.895 - - - - - - - - 0.895 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
59. TMEM269 ENSGALG00000025800 143 0.894 - - - - - - - - 0.894 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
60. MSANTD4 ENSGALG00000017177 3306 0.893 - - - - - - - - 0.893 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
61. DDRGK1 ENSGALG00000016003 9098 0.892 - - - - - - - - 0.892 - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
62. IGF1R ENSGALG00000040651 772 0.892 - - - - - - - - 0.892 - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
63. CEP250 ENSGALG00000026151 163 0.891 - - - - - - - - 0.891 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
64. GDPD2 ENSGALG00000005842 86 0.89 - - - - - - - - 0.890 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
65. KLHL10 ENSGALG00000003624 205 0.889 - - - - - - - - 0.889 - kelch like family member 10 [Source:NCBI gene;Acc:420033]
66. SEMA3E ENSGALG00000038225 677 0.888 - - - - - - - - 0.888 - semaphorin 3E [Source:NCBI gene;Acc:374089]
67. ANKRD50 ENSGALG00000011831 2870 0.888 - - - - - - - - 0.888 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
68. ANKRD49 ENSGALG00000017210 3247 0.887 - - - - - - - - 0.887 - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
69. LRP12 ENSGALG00000033630 2534 0.882 - - - - - - - - 0.882 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
70. ECM2 ENSGALG00000004695 375 0.882 - - - - - - - - 0.882 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
71. AACS ENSGALG00000002899 960 0.882 - - - - - - - - 0.882 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
72. FAM47E-STBD1 FAM47E-STBD1 1148 0.88 - - - - - - - - 0.880 -
73. ATPBD4 ATPBD4 1823 0.88 - - - - - - - - 0.880 -
74. TBC1D2 ENSGALG00000001944 717 0.879 - - - - - - - - 0.879 - TBC1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:18026]
75. MED17 ENSGALG00000017218 5821 0.878 - - - - - - - - 0.878 - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
76. C1orf131 C1orf131 141 0.877 - - - - - - - - 0.877 -
77. RRP1B ENSGALG00000035696 12309 0.877 - - - - - - - - 0.877 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
78. GNMT ENSGALG00000043290 3288 0.876 - - - - - - - - 0.876 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
79. CSRNP3 ENSGALG00000010971 539 0.875 - - - - - - - - 0.875 - cysteine and serine rich nuclear protein 3 [Source:HGNC Symbol;Acc:HGNC:30729]
80. TSN ENSGALG00000011652 905 0.874 - - - - - - - - 0.874 - translin [Source:NCBI gene;Acc:395955]
81. IQCA1 ENSGALG00000003980 87 0.874 - - - - - - - - 0.874 - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
82. DHRSX ENSGALG00000016681 866 0.873 - - - - - - - - 0.873 - dehydrogenase/reductase X-linked [Source:HGNC Symbol;Acc:HGNC:18399]
83. FANCB ENSGALG00000016569 1193 0.872 - - - - - - - - 0.872 - FA complementation group B [Source:NCBI gene;Acc:418628]
84. CHD2 ENSGALG00000006949 1076 0.872 - - - - - - - - 0.872 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
85. ERBB2 ENSGALG00000031529 313 0.872 - - - - - - - - 0.872 - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
86. PLSCR1 ENSGALG00000006805 1220 0.871 - - - - - - - - 0.871 - phospholipid scramblase 1 [Source:HGNC Symbol;Acc:HGNC:9092]
87. CREB5 ENSGALG00000038265 92 0.87 - - - - - - - - 0.870 - cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
88. KRT14 ENSGALG00000003690 682 0.87 - - - - - - - - 0.870 - keratin 14 [Source:NCBI gene;Acc:408039]
89. TPM4 ENSGALG00000002563 15621 0.87 - - - - - - - - 0.870 - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
90. ZDHHC7 ENSGALG00000042522 1774 0.869 - - - - - - - - 0.869 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
91. ENSGALG00000019793 ENSGALG00000019793 198 0.869 - - - - - - - - 0.869 -
92. YBX3 ENSGALG00000031890 819 0.869 - - - - - - - - 0.869 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
93. SAMD13 ENSGALG00000008835 1597 0.868 - - - - - - - - 0.868 - sterile alpha motif domain containing 13 [Source:NCBI gene;Acc:424541]
94. TXNRD1 ENSGALG00000035345 4784 0.868 - - - - - - - - 0.868 - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
95. ARPC2 ENSGALG00000011452 7338 0.863 - - - - - - - - 0.863 - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
96. C3H6ORF154 C3H6ORF154 1078 0.863 - - - - - - - - 0.863 -
97. F5 ENSGALG00000029298 1850 0.862 - - - - - - - - 0.862 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
98. ENSGALG00000014171 ENSGALG00000014171 10383 0.861 - - - - - - - - 0.861 -
99. SFXN2 ENSGALG00000008114 2773 0.861 - - - - - - - - 0.861 - sideroflexin 2, transcript variant X6
100. SNX2 ENSGALG00000005337 590 0.86 - - - - - - - - 0.860 - sorting nexin 2 [Source:NCBI gene;Acc:426797]

There are 339 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA