Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CUBN

Gene Name Gene ID Reads Annotation
CUBN ENSGALG00000008704 21 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]











Genes with expression patterns similar to CUBN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CUBN ENSGALG00000008704 21 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
2. SCN4B ENSGALG00000007409 22 2.639 - - - - 0.803 - 0.836 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
3. SNORA53 SNORA53 6 2 - - 1.000 - - - - - - 1.000
4. ENSGALG00000004157 ENSGALG00000004157 1 2 - - 1.000 - - - - 1.000 - -
5. ENSGALG00000001138 ENSGALG00000001138 21 2 - - - - - - 1.000 1.000 - -
6. CFAP74 ENSGALG00000001288 54 1.989 - - - 0.989 - - 1.000 - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
7. KIAA0319L ENSGALG00000002445 75 1.963 - - - 0.963 - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
8. BLB1 ENSGALG00000000141 13 1.917 - - - - 0.917 - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
9. SLC6A6 ENSGALG00000006425 31 1.917 - - - - 0.917 - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
10. PPIL6 ENSGALG00000015237 11 1.906 - - 0.906 - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
11. E2F3 ENSGALG00000012680 21 1.891 - - - - - - - 1.000 - 0.891 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
12. CD99L2 ENSGALG00000009075 5 1.866 - - - - 0.866 - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
13. ATXN10 ENSGALG00000014234 16 1.768 - - - - - - 0.768 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
14. ATXN3 ENSGALG00000010766 48 1.763 - - - 0.960 - - - - - 0.803 ataxin 3 [Source:NCBI gene;Acc:378424]
15. FLT4 ENSGALG00000005802 5 1.76 - - - - - - 0.760 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
16. ENSGALG00000027796 ENSGALG00000027796 7 1.745 - - - - - - - 1.000 - 0.745
17. PHC2 62 1.721 - - - - - - 0.721 1.000 - - polyhomeotic homolog 2
18. MUT ENSGALG00000016697 43 1.713 - - - - - - - 1.000 - 0.713 methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
19. MMP27 ENSGALG00000019060 19 1.709 - - 0.709 - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
20. EPG5 ENSGALG00000036259 71 1.641 - - - - - - 0.738 - - 0.903 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
21. CHRDL1 ENSGALG00000008072 711 1.616 - - - 0.912 - - - - - 0.704 chordin like 1 [Source:NCBI gene;Acc:373985]
22. DDX31 ENSGALG00000041473 289 1.497 - - - 0.729 - - - - - 0.768 DEAD-box helicase 31 [Source:HGNC Symbol;Acc:HGNC:16715]
23. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
24. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
25. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
26. CLDN1 ENSGALG00000026862 28 1 - - - - - - 1.000 - - - claudin 1 [Source:NCBI gene;Acc:424910]
27. MPPED2 ENSGALG00000012136 7 1 - - - - - - 1.000 - - - metallophosphoesterase domain containing 2 [Source:NCBI gene;Acc:421604]
28. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
29. XKRX ENSGALG00000006637 13 1 - - - - - - - - - 1.000 XK related, X-linked, transcript variant X4
30. MSL2 ENSGALG00000039294 55 1 - - - - - - 1.000 - - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
31. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
32. SRD5A2 ENSGALG00000010625 23 1 - - - - - - 1.000 - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
33. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
34. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
35. ENSGALG00000012391 ENSGALG00000012391 0 1 - - - - - - - 1.000 - -
36. CLCA2 8 1 - - 1.000 - - - - - - - chloride channel accessory 2, transcript variant X1
37. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
38. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
39. DMP1 ENSGALG00000010927 5 1 - - - - - - 1.000 - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
40. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
41. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
42. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
43. COL4A3 ENSGALG00000038612 41 1 - - - - - - - 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
44. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
45. CYP17A1 ENSGALG00000008121 227 1 - - - - - - 1.000 - - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
46. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
47. ENSGALG00000019221 ENSGALG00000019221 9 1 - - - - - - 1.000 - - -
48. CCDC148 ENSGALG00000012555 22 1 - - - - - - 1.000 - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
49. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
50. VIPR1 ENSGALG00000005259 3 1 - - - - - - - - - 1.000 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
51. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
52. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
53. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
54. ENSGALG00000001478 ENSGALG00000001478 23 1 - - - - - - 1.000 - - -
55. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
56. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
57. ENSGALG00000000346 ENSGALG00000000346 130 1 - - - - - - 1.000 - - -
58. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
59. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
60. CCDC181 ENSGALG00000015221 10 1 - - - - - - - 1.000 - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
61. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
62. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
63. LAMP5 ENSGALG00000008918 1 1 - - 1.000 - - - - - - - lysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
64. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
65. UNCX ENSGALG00000039292 165 1 - - - - - - - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
66. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
67. PLCL1 ENSGALG00000008113 23 1 - - - - - - 1.000 - - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
68. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
69. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
70. PICALM ENSGALG00000039037 57 1 - - - - - - - 1.000 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
71. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
72. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
73. gga-mir-6569 ENSGALG00000026551 10 1 - - - - - - - 1.000 - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
74. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
75. CTNNAL1 ENSGALG00000013207 44 1 - - - - - - 1.000 - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
76. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
77. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
78. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
79. MATN3 ENSGALG00000016478 10 1 - - - - - - 1.000 - - - matrilin 3 [Source:NCBI gene;Acc:395954]
80. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
81. ENSGALG00000015324 ENSGALG00000015324 10 1 - - 1.000 - - - - - - -
82. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
83. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
84. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
85. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
86. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
87. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
88. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
89. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
90. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
91. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
92. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
93. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
94. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
95. STMN2 ENSGALG00000039690 989 1 - - - - - - - 1.000 - - stathmin 2 [Source:NCBI gene;Acc:396095]
96. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
97. snoU109 snoU109 1 1 - - 1.000 - - - - - - -
98. SMTNL1 12 1 - - - - - - 1.000 - - - smoothelin like 1
99. CTBS ENSGALG00000008780 26 1 - - 1.000 - - - - - - - chitobiase [Source:HGNC Symbol;Acc:HGNC:2496]
100. RGR ENSGALG00000002299 17 1 - - - - - - 1.000 - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]

There are 509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA