Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CTU2

Gene Name Gene ID Reads Annotation
CTU2 4818 cytosolic thiouridylase subunit 2, transcript variant X3











Genes with expression patterns similar to CTU2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CTU2 4818 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cytosolic thiouridylase subunit 2, transcript variant X3
2. ATP5MC1 ENSGALG00000001330 37766 1.824 - - - - - - 0.987 0.837 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
3. POLR2E ENSGALG00000002591 26405 1.639 - - - - - - 0.822 0.817 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
4. SUMO3 ENSGALG00000032783 47823 1.434 - - - - - - 0.731 0.703 - - small ubiquitin-like modifier 3 [Source:NCBI gene;Acc:770553]
5. TMC1 ENSGALG00000015145 1180 1 - - - - - - 1.000 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
6. TMEM62 ENSGALG00000009260 1170 1 - - - - - - 1.000 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
7. PTBP2 ENSGALG00000005552 3443 1 - - - - - - 1.000 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
8. CAND1 4541 1 - - - - - - 1.000 - - - cullin associated and neddylation dissociated 1
9. TMEM120B ENSGALG00000004254 2819 1 - - - - - - 1.000 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
10. ENSGALG00000014190 ENSGALG00000014190 5735 1 - - - - - - 1.000 - - -
11. TMEM97 ENSGALG00000005702 2037 1 - - - - - - 1.000 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
12. ABCC10 2213 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 10, transcript variant X10
13. BMP3 ENSGALG00000035052 3260 1 - - - - - - 1.000 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
14. ZNF462 ENSGALG00000015451 12653 0.999 - - - - - - - 0.999 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
15. VEGFC ENSGALG00000010847 2197 0.999 - - - - - - - 0.999 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
16. HOXD8 ENSGALG00000037272 4338 0.999 - - - - - - 0.999 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
17. CREB1 ENSGALG00000008494 2219 0.999 - - - - - - - 0.999 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
18. USP30 ENSGALG00000040265 2000 0.999 - - - - - - - 0.999 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
19. M6PR ENSGALG00000031681 9442 0.999 - - - - - - 0.999 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
20. TMEM69 ENSGALG00000010279 716 0.999 - - - - - - - 0.999 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
21. C9orf89 C9orf89 3056 0.999 - - - - - - - 0.999 - -
22. STAMBP ENSGALG00000042555 1362 0.999 - - - - - - - 0.999 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
23. GNA12 ENSGALG00000004368 692 0.999 - - - - - - - 0.999 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
24. PRRX2 ENSGALG00000028236 1990 0.999 - - - - - - - 0.999 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
25. ENSGALG00000028413 ENSGALG00000028413 551 0.999 - - - - - - - 0.999 - -
26. TDRD1 ENSGALG00000046180 612 0.999 - - - - - - - 0.999 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
27. MRPL32 ENSGALG00000037258 6861 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
28. TNFRSF21 ENSGALG00000016719 2762 0.999 - - - - - - - 0.999 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
29. POLR1C ENSGALG00000010349 7059 0.999 - - - - - - 0.999 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
30. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
31. SIN3A ENSGALG00000001644 1141 0.999 - - - - - - - 0.999 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
32. USP42 ENSGALG00000003378 1392 0.999 - - - - - - - 0.999 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
33. EGFLAM ENSGALG00000003726 4588 0.999 - - - - - - 0.999 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
34. ENSGALG00000004773 ENSGALG00000004773 10418 0.998 - - - - - - 0.998 - - -
35. VPS36 ENSGALG00000017026 3658 0.998 - - - - - - - 0.998 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
36. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
37. PPAT ENSGALG00000013728 7563 0.998 - - - - - - - 0.998 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
38. MOB3A ENSGALG00000031729 9690 0.998 - - - - - - 0.998 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
39. SLBP ENSGALG00000015712 5586 0.998 - - - - - - - 0.998 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
40. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
41. INTS2 ENSGALG00000005269 6966 0.997 - - - - - - - 0.997 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
42. IMP4 ENSGALG00000029152 11669 0.997 - - - - - - 0.997 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
43. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
44. PHAX ENSGALG00000014691 8114 0.997 - - - - - - - 0.997 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
45. FAT1 ENSGALG00000013579 6030 0.997 - - - - - - - 0.997 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
46. PHGDH ENSGALG00000002988 6912 0.996 - - - - - - 0.996 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
47. EIF3J ENSGALG00000008187 43570 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
48. GYG1 ENSGALG00000035535 6311 0.996 - - - - - - - 0.996 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
49. PTK7 ENSGALG00000008609 8081 0.995 - - - - - - - 0.995 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
50. POLR2D ENSGALG00000002057 14548 0.995 - - - - - - 0.995 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
51. LMO7 ENSGALG00000016920 3809 0.995 - - - - - - - 0.995 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
52. MCM2 ENSGALG00000006037 13458 0.994 - - - - - - 0.994 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
53. PDCD6 ENSGALG00000013400 7611 0.994 - - - - - - - 0.994 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
54. KLHDC2 ENSGALG00000012244 12903 0.994 - - - - - - - 0.994 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
55. PFDN4 ENSGALG00000007792 26514 0.992 - - - - - - 0.992 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
56. CHNTHL1 CHNTHL1 4976 0.991 - - - - - - 0.991 - - -
57. ITGA1 ENSGALG00000014891 11378 0.991 - - - - - - 0.991 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
58. PRDX6 ENSGALG00000003053 17928 0.991 - - - - - - 0.991 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
59. FAM103A1 17380 0.989 - - - - - - 0.989 - - - family with sequence similarity 103 member A1, transcript variant X2
60. DDX21 ENSGALG00000004144 13105 0.989 - - - - - - 0.989 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
61. FBN3 ENSGALG00000037625 23313 0.989 - - - - - - 0.989 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
62. DYNLL2 ENSGALG00000005522 17107 0.987 - - - - - - 0.987 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
63. WDFY3 10775 0.983 - - - - - - - 0.983 - - WD repeat and FYVE domain containing 3, transcript variant X7
64. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
65. SMC2 ENSGALG00000015691 34013 0.981 - - - - - - 0.981 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
66. NAA30 ENSGALG00000012098 4681 0.979 - - - - - - - 0.979 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
67. LAMTOR2 ENSGALG00000029881 35356 0.979 - - - - - - - 0.979 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
68. DENR ENSGALG00000003795 30805 0.978 - - - - - - 0.978 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
69. ACTR6 ENSGALG00000040976 31271 0.966 - - - - - - - 0.966 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
70. NSUN4 ENSGALG00000010360 3567 0.961 - - - - - - - 0.961 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
71. CPSF4 ENSGALG00000004714 14353 0.96 - - - - - - - 0.960 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
72. SPATA20 ENSGALG00000006857 3506 0.959 - - - - - - - 0.959 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
73. C11orf57 C11orf57 4971 0.959 - - - - - - - 0.959 - -
74. BMP4 ENSGALG00000012429 4306 0.959 - - - - - - - 0.959 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
75. MCM6 ENSGALG00000012348 12523 0.951 - - - - - - - 0.951 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
76. TIMM23B ENSGALG00000002089 8122 0.951 - - - - - - - 0.951 - - translocase of inner mitochondrial membrane 23 homolog B
77. CSNK2A1 ENSGALG00000006197 41409 0.949 - - - - - - - 0.949 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
78. RPL7L1 ENSGALG00000011974 20292 0.948 - - - - - - - 0.948 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
79. ALDH1A2 ENSGALG00000004270 49483 0.945 - - - - - - 0.945 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
80. MYBL2 ENSGALG00000003503 15875 0.941 - - - - - - - 0.941 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
81. MED6 ENSGALG00000029743 9414 0.94 - - - - - - - 0.940 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
82. PDCL3 ENSGALG00000016772 14897 0.939 - - - - - - - 0.939 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
83. FARP1 ENSGALG00000016886 13132 0.939 - - - - - - - 0.939 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
84. HSPA12A ENSGALG00000009248 7783 0.934 - - - - - - - 0.934 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
85. DHCR24 ENSGALG00000010798 3963 0.934 - - - - - - - 0.934 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
86. ZNF367 ENSGALG00000012629 3215 0.933 - - - - - - - 0.933 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
87. MGST1 ENSGALG00000013098 17632 0.931 - - - - - - - 0.931 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
88. LAPTM4A ENSGALG00000016479 15973 0.93 - - - - - - - 0.930 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
89. THRAP3 ENSGALG00000002144 21958 0.928 - - - - - - - 0.928 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
90. CALM_1 CALM_1 57812 0.927 - - - - - - 0.927 - - -
91. ATP2A2 ENSGALG00000032287 12734 0.919 - - - - - - 0.919 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
92. DERL1 ENSGALG00000033950 15074 0.908 - - - - - - - 0.908 - - derlin 1 [Source:NCBI gene;Acc:420350]
93. TAF15 ENSGALG00000002060 12320 0.899 - - - - - - - 0.899 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
94. UQCRFS1 ENSGALG00000025819 66637 0.895 - - - - - - 0.895 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
95. TMEM199 ENSGALG00000023757 10781 0.891 - - - - - - - 0.891 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
96. GLO1 ENSGALG00000010127 31662 0.879 - - - - - - - 0.879 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
97. CKAP4 ENSGALG00000012659 36398 0.877 - - - - - - - 0.877 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
98. FBXO9 ENSGALG00000016320 9600 0.874 - - - - - - - 0.874 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
99. ATP6V0B ENSGALG00000010091 14901 0.871 - - - - - - - 0.871 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
100. EIF1 ENSGALG00000028517 124882 0.863 - - - - - - - 0.863 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA