Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CTSO

Gene Name Gene ID Reads Annotation
CTSO ENSGALG00000009373 4186 cathepsin O [Source:NCBI gene;Acc:422410]











Genes with expression patterns similar to CTSO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CTSO ENSGALG00000009373 4186 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cathepsin O [Source:NCBI gene;Acc:422410]
2. LSM6 ENSGALG00000009985 18582 2.42 - - - - - - 0.710 0.977 - 0.733 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
3. GOLGA7 ENSGALG00000003483 26525 1.71 - - - - - - 0.734 0.976 - - golgin A7 [Source:NCBI gene;Acc:426787]
4. ENSGALG00000028992 ENSGALG00000028992 185077 1.665 - - - - - - - 0.792 - 0.873
5. UCHL3 ENSGALG00000016921 16208 1.662 - - - - - - 0.769 - - 0.893 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
6. FBXO5 ENSGALG00000013607 6156 1.661 - - - - - - - 0.836 - 0.825 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
7. CDH5 ENSGALG00000032349 8526 1.66 - - - - - - - 0.805 - 0.855 cadherin 5 [Source:NCBI gene;Acc:374068]
8. GOLGA2 ENSGALG00000004881 677 1.654 - - 0.812 - - - - 0.842 - - golgin A2, transcript variant X7
9. TMEM128 ENSGALG00000014992 6567 1.641 - - 0.772 - - - - - - 0.869 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
10. Sep-11 Sep-11 2005 1.634 - - 0.793 - - - - 0.841 - -
11. NLGN1 ENSGALG00000040938 651 1.628 - - 0.882 - - - - - - 0.746 neuroligin 1 [Source:NCBI gene;Acc:424980]
12. SPDL1 ENSGALG00000001942 4403 1.623 - - - - - - 0.722 - - 0.901 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
13. SMC4 ENSGALG00000009553 15715 1.622 - - - - - - 0.764 - - 0.858 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
14. FRMD3 ENSGALG00000012577 999 1.618 - - 0.741 - - - - - - 0.877 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
15. HDAC2 ENSGALG00000014991 23458 1.615 - - - - - - - 0.735 - 0.880 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
16. SMDT1 ENSGALG00000011897 9360 1.611 - - - - - - 0.779 - - 0.832 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
17. FANCL ENSGALG00000030022 7423 1.606 - - - - - - 0.777 - - 0.829 FA complementation group L [Source:NCBI gene;Acc:421202]
18. MIPEP ENSGALG00000017118 8666 1.595 - - 0.777 - - - - - - 0.818 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
19. RBM5 30998 1.594 - - 0.724 - - - - - - 0.870 RNA binding motif protein 5, transcript variant X1
20. QDPR ENSGALG00000030070 6953 1.592 - - - - - - 0.704 - - 0.888 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
21. RBBP8 ENSGALG00000014982 3255 1.583 - - - - - - 0.706 - - 0.877 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
22. GGA.31975 GGA.31975 8825 1.58 - - - - - - 0.722 - - 0.858
23. WDR53 ENSGALG00000006395 4938 1.576 - - 0.774 - - - - - - 0.802 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
24. TMX3 ENSGALG00000013757 6387 1.576 - - - - - - 0.793 - - 0.783 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
25. TMX4 ENSGALG00000028587 3513 1.575 - - - - - - 0.701 - - 0.874 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
26. JMJD1C ENSGALG00000002942 4556 1.573 - - - - - - 0.735 0.838 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
27. UBE2V1 ENSGALG00000008015 17947 1.57 - - 0.818 - - - 0.752 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
28. SP3 ENSGALG00000031796 8997 1.568 - - - - - - 0.716 - - 0.852 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
29. KIAA1551 ENSGALG00000045168 3435 1.564 - - - - - - 0.753 - - 0.811 KIAA1551, transcript variant X1
30. KMT2C 6306 1.563 - - - - - - 0.706 - - 0.857 lysine methyltransferase 2C, transcript variant X14
31. HNRNPD ENSGALG00000011184 10686 1.559 - - - - - - 0.778 - - 0.781 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
32. SYNCRIP ENSGALG00000015830 30555 1.556 - - 0.809 - - - - - - 0.747 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
33. SLC30A5 ENSGALG00000014787 5573 1.554 - - - - - - 0.703 - - 0.851 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
34. COL5A2 ENSGALG00000031112 18358 1.552 - - - - - - - - 0.729 0.823 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
35. ERI1 ENSGALG00000011448 3236 1.545 - - 0.817 - - - - - - 0.728 exoribonuclease 1 [Source:NCBI gene;Acc:422629]
36. B3GALTL B3GALTL 4128 1.542 - - 0.719 - - - - - - 0.823
37. RAB10 ENSGALG00000016535 5272 1.539 - - - - - - 0.748 - - 0.791 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
38. BCCIP ENSGALG00000006617 13291 1.538 - - 0.774 - - - - 0.764 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
39. MRPL30 ENSGALG00000016760 16965 1.533 - - 0.723 - - - 0.810 - - - mitochondrial ribosomal protein L30
40. ESF1 ENSGALG00000034768 8610 1.53 - - - - - - 0.702 0.828 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
41. SKP2 ENSGALG00000003547 14637 1.523 - - - - - - 0.749 0.774 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
42. SLC25A24 ENSGALG00000001938 3671 1.523 - - 0.811 - - - 0.712 - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
43. HOXA5 ENSGALG00000025929 6231 1.52 - - - - - - 0.781 - - 0.739 homeobox A5 [Source:NCBI gene;Acc:100858404]
44. TMEM30A ENSGALG00000015904 8533 1.518 - - 0.741 - - - 0.777 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
45. GLO1 ENSGALG00000010127 31662 1.503 - - - - - - 0.749 - - 0.754 glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
46. ST5 6869 1.501 - - 0.742 - - - 0.759 - - - suppression of tumorigenicity 5, transcript variant X1
47. RPF2 ENSGALG00000037087 12788 1.488 - - - - - - 0.711 - - 0.777 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
48. SEC23A_1 ENSGALG00000010150 14745 1.487 - - 0.740 - - - 0.747 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
49. SPARC ENSGALG00000004184 36410 1.473 - - - - - - 0.728 0.745 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
50. EBNA1BP2 ENSGALG00000009045 17453 1.472 - - - - - - 0.753 - - 0.719 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
51. gga-mir-7476 gga-mir-7476 20209 1.47 - - - - - - 0.719 - - 0.751
52. TXNDC12 ENSGALG00000010569 13822 1.47 - - 0.728 - - - - - - 0.742 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
53. API5 ENSGALG00000037968 18265 1.465 - - 0.736 - - - 0.729 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
54. ZOV3 ZOV3 3267 1.444 - - 0.742 - - - 0.702 - - -
55. FAF2 ENSGALG00000003331 4776 1.442 - - 0.724 - - - - 0.718 - - Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
56. PSPC1 ENSGALG00000017142 13036 1.431 - - - - - - 0.706 - - 0.725 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
57. DDOST ENSGALG00000010073 18707 1.411 - - 0.700 - - - - - - 0.711 dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
58. TRIP13 ENSGALG00000033834 6590 0.991 - - - - - - - 0.991 - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
59. CPNE1 ENSGALG00000040856 610 0.926 - - - - - - - - - 0.926 copine 1 [Source:NCBI gene;Acc:419134]
60. TRPC4AP ENSGALG00000003147 3967 0.925 - - - - - - - - - 0.925 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
61. ZRANB1 ENSGALG00000031474 3909 0.924 - - - - - - - - - 0.924 zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
62. PNPT1 ENSGALG00000043545 1306 0.919 - - - - - - - - - 0.919 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
63. UQCR11 ENSGALG00000001096 25245 0.918 - - - - - - - - - 0.918 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
64. RAD18 ENSGALG00000008368 7214 0.916 - - - - - - - - - 0.916 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
65. RTN4R ENSGALG00000007732 1515 0.916 - - - - - - - - - 0.916 reticulon 4 receptor
66. PREX2 ENSGALG00000042354 134 0.913 - - - - - - - - - 0.913 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
67. HEXA ENSGALG00000043828 4789 0.911 - - - - - - - - - 0.911 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
68. TANGO2 ENSGALG00000002056 1971 0.911 - - - - - - - - - 0.911 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
69. C14orf80 C14orf80 1921 0.91 - - - - - - - - - 0.910
70. TXNDC11 ENSGALG00000003154 2224 0.909 - - - - - - - - - 0.909 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
71. HSPE1 ENSGALG00000009070 87567 0.908 - - - - - - - - - 0.908 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
72. FBXO38 ENSGALG00000038627 2658 0.908 - - - - - - - - - 0.908 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
73. CPSF2 ENSGALG00000010783 5236 0.908 - - - - - - - - - 0.908 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
74. TP53BP1 ENSGALG00000042201 708 0.907 - - - - - - - - - 0.907 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
75. CETN1 ENSGALG00000026741 7243 0.906 - - - - - - - - - 0.906 centrin 1 [Source:NCBI gene;Acc:422668]
76. PROM1 ENSGALG00000014496 2494 0.906 - - - - - - - - - 0.906 prominin 1 [Source:NCBI gene;Acc:422825]
77. TMEM237 ENSGALG00000008381 1317 0.905 - - - - - - - - - 0.905 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
78. HAUS8 ENSGALG00000003727 351 0.901 - - - - - - - - - 0.901 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
79. ARPC1B ENSGALG00000032588 2407 0.9 - - - - - - - - - 0.900 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
80. WDSUB1 ENSGALG00000012574 2038 0.9 - - - - - - - - - 0.900 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
81. C10orf118 C10orf118 762 0.9 - - - - - - - - - 0.900
82. MTERFD1 MTERFD1 3640 0.899 - - - - - - - - - 0.899
83. GSTAL2 ENSGALG00000028551 4899 0.899 - - - - - - - - - 0.899 glutathione S-transferase alpha-like 2, transcript variant X4
84. ENSGALG00000009044 ENSGALG00000009044 14492 0.899 - - - - - - - - - 0.899
85. PDPN ENSGALG00000030096 647 0.898 - - - - - - - - - 0.898 podoplanin, transcript variant X4
86. CCT8 ENSGALG00000015821 12161 0.898 - - - - - - - - - 0.898 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
87. INTS10 ENSGALG00000010130 6320 0.897 - - - - - - - - - 0.897 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
88. CRYM ENSGALG00000002484 3558 0.897 - - - - - - - - - 0.897 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
89. NARS ENSGALG00000040506 9506 0.895 - - - - - - - - - 0.895 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
90. PTPN5 ENSGALG00000006368 440 0.895 - - 0.895 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
91. TMEM130 ENSGALG00000003569 949 0.894 - - - - - - - - - 0.894 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
92. 5 5 4209 0.894 - - - - - - - - - 0.894
93. CCNA2 ENSGALG00000011881 2574 0.894 - - - - - - - - - 0.894 cyclin A2 [Source:NCBI gene;Acc:396172]
94. CPT2 ENSGALG00000010681 3211 0.892 - - - - - - - - - 0.892 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
95. APBA3 ENSGALG00000000740 1249 0.892 - - - - - - - - - 0.892 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
96. AFG3L2 ENSGALG00000013853 1138 0.892 - - - - - - - - - 0.892 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
97. C26H6ORF89 C26H6ORF89 1826 0.892 - - - - - - - - - 0.892
98. IL10R2 IL10R2 72 0.891 - - - - - - - - - 0.891
99. CPNE2 ENSGALG00000001316 236 0.891 - - - - - - - - - 0.891 copine 2 [Source:NCBI gene;Acc:415646]
100. RER1 ENSGALG00000021683 9074 0.891 - - - - - - - - - 0.891 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]

There are 863 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA