Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CTSD

Gene Name Gene ID Reads Annotation
CTSD ENSGALG00000006613 4 cathepsin D [Source:NCBI gene;Acc:396090]











Genes with expression patterns similar to CTSD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CTSD ENSGALG00000006613 4 4 - - 1.000 1.000 - 1.000 - - - 1.000 cathepsin D [Source:NCBI gene;Acc:396090]
2. ENSGALG00000022715 ENSGALG00000022715 13 1.936 - - - 0.936 - 1.000 - - - -
3. TMEM184B ENSGALG00000012272 1 1.848 - - 1.000 - - - - - - 0.848 transmembrane protein 184B [Source:NCBI gene;Acc:418027]
4. AK8 ENSGALG00000040923 10 1 - - 1.000 - - - - - - - adenylate kinase 8, transcript variant X1
5. ENSGALG00000028038 ENSGALG00000028038 9 1 - - - 1.000 - - - - - -
6. COTL1 ENSGALG00000017644 81 1 - - - - - 1.000 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
7. SLCO4C1 ENSGALG00000026768 30 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
8. ATP7B ENSGALG00000017021 7 1 - - - - - 1.000 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
9. C11orf49 ENSGALG00000008255 36 1 - - - - - - - - - 1.000 chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
10. TTC34 ENSGALG00000001081 8 1 - - - - - 1.000 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
11. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - 1.000 - - - - - -
12. ENSGALG00000015321 ENSGALG00000015321 18 1 - - - - - 1.000 - - - -
13. HMX2 ENSGALG00000030875 10 1 - - - - - 1.000 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
14. DMP1 ENSGALG00000010927 5 1 - - - - - 1.000 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
15. CDC42EP1 ENSGALG00000038556 3 1 - - 1.000 - - - - - - - CDC42 effector protein 1 [Source:HGNC Symbol;Acc:HGNC:17014]
16. PPFIA2 ENSGALG00000010958 27 1 - - - - - 1.000 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
17. PFN4 ENSGALG00000019866 53 1 - - 1.000 - - - - - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
18. KCNC1 ENSGALG00000006220 15 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
19. gga-let-7i ENSGALG00000018237 2 1 - - - - - 1.000 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
20. IRX6 ENSGALG00000023738 2 1 - - - 1.000 - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
21. EAF1 ENSGALG00000033379 3 1 - - 1.000 - - - - - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
22. IRG1 IRG1 21 1 - - 1.000 - - - - - - -
23. DOK6 ENSGALG00000013753 2 1 - - 1.000 - - - - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
24. ENSGALG00000020349 ENSGALG00000020349 10 1 - - - - - 1.000 - - - -
25. B3GALNT1 1 1 - - 1.000 - - - - - - - beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), transcript variant X14
26. TMEM8C ENSGALG00000021520 30 1 - - - - - 1.000 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
27. ENSGALG00000026769 ENSGALG00000026769 1 1 - - 1.000 - - - - - - -
28. FAM151B ENSGALG00000015577 11 1 - - - - - - - - - 1.000 family with sequence similarity 151 member B
29. NOXO1 ENSGALG00000005572 14 1 - - - - - 1.000 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
30. TOX3 ENSGALG00000034649 54 1 - - - - - 1.000 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
31. SLC26A11 ENSGALG00000007018 7 1 - - - - - 1.000 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
32. TSSK3 4 1 - - - - - 1.000 - - - - testis specific serine kinase 3
33. ST7L ENSGALG00000001538 5 1 - - - - - 1.000 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
34. BTN1A1 ENSGALG00000000589 20 1 - - - - - - - - - 1.000 butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
35. TRH ENSGALG00000008490 16 1 - - - - - 1.000 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
36. BACE1 ENSGALG00000007298 3 1 - - - - - 1.000 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
37. ENSGALG00000023100 ENSGALG00000023100 12 1 - - 1.000 - - - - - - -
38. C15orf60 C15orf60 16 1 - - - - - - - - - 1.000
39. LOC100858814 ENSGALG00000028210 3 1 - - - - - 1.000 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
40. STK35 ENSGALG00000036219 0 1 - - - - - 1.000 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
41. CDO1 ENSGALG00000002358 74 1 - - 1.000 - - - - - - - cysteine dioxygenase type 1 [Source:HGNC Symbol;Acc:HGNC:1795]
42. DIET1 DIET1 1 1 - - - - - 1.000 - - - -
43. ADAM5P ENSGALG00000009606 31 1 - - 1.000 - - - - - - - ADAM metallopeptidase domain 5, pseudogene, transcript variant X5
44. OSTN ENSGALG00000007226 33 1 - - - - - 1.000 - - - - osteocrin [Source:NCBI gene;Acc:424907]
45. HOXD8 ENSGALG00000037272 4338 1 - - - 1.000 - - - - - - homeobox D8 [Source:NCBI gene;Acc:396301]
46. BANK1 ENSGALG00000012292 17 1 - - - - - 1.000 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
47. GUCA1C ENSGALG00000015364 1 1 - - 1.000 - - - - - - - guanylate cyclase activator 1C [Source:HGNC Symbol;Acc:HGNC:4680]
48. ENSGALG00000021026 ENSGALG00000021026 2 1 - - - 1.000 - - - - - -
49. ANKFN1 ENSGALG00000003105 15 1 - - 1.000 - - - - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
50. FGL1 ENSGALG00000013606 42 1 - - - - - 1.000 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
51. ACRBP 0 1 - - - - - 1.000 - - - - acrosin binding protein
52. WDR63 ENSGALG00000008696 15 1 - - - - - 1.000 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
53. MARCO ENSGALG00000012119 5 1 - - - - - 1.000 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
54. GVINP1 ENSGALG00000016556 4 1 - - - - - 1.000 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
55. ENSGALG00000009209 ENSGALG00000009209 6 1 - - 1.000 - - - - - - -
56. TP63 ENSGALG00000007324 6 1 - - - - - 1.000 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
57. KIAA0247 KIAA0247 10 1 - - 1.000 - - - - - - -
58. gga-mir-218-1 ENSGALG00000018327 3 1 - - - 1.000 - - - - - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
59. ENSGALG00000028531 ENSGALG00000028531 2 1 - - - - - 1.000 - - - -
60. MAPK11 ENSGALG00000040023 15 1 - - - - - 1.000 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
61. FAM149B1 ENSGALG00000002693 16 1 - - - - - 1.000 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
62. SERPINB5 ENSGALG00000012873 24 1 - - - - - 1.000 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
63. CCDC64 CCDC64 2 1 - - - - - 1.000 - - - -
64. KLHL23 ENSGALG00000020737 13 1 - - - - - 1.000 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
65. TP53TG5 ENSGALG00000021357 1 1 - - - 1.000 - - - - - - TP53 target 5, transcript variant X9
66. CHSY1 ENSGALG00000026468 4 1 - - - - - 1.000 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
67. SCARNA23 SCARNA23 2 1 - - - - - 1.000 - - - -
68. Sep-04 Sep-04 1 1 - - 1.000 - - - - - - -
69. LRRC39 ENSGALG00000005284 5 1 - - 1.000 - - - - - - - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
70. CFUC-TIX CFUC-TIX 1 1 - - - - - 1.000 - - - -
71. ENSGALG00000026721 ENSGALG00000026721 1 1 - - - 1.000 - - - - - -
72. NLGN3 ENSGALG00000005553 4 1 - - 1.000 - - - - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
73. ENSGALG00000005785 ENSGALG00000005785 1570 1 - - 1.000 - - - - - - -
74. CD5 ENSGALG00000031735 3 1 - - 1.000 - - - - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
75. XKRX ENSGALG00000006637 13 1 - - - 1.000 - - - - - - XK related, X-linked, transcript variant X4
76. DDTNFR23 ENSGALG00000006407 4 1 - - - - - 1.000 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
77. SRRM3 ENSGALG00000001932 12 1 - - - - - 1.000 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
78. WDR16 WDR16 22 1 - - 1.000 - - - - - - -
79. ST6GALNAC3 ENSGALG00000009027 17 1 - - - - - 1.000 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
80. SOCS1B SOCS1B 1 1 - - 1.000 - - - - - - -
81. AVDL ENSGALG00000021848 1 1 - - - 1.000 - - - - - - avidin-like, transcript variant X2
82. RGS10 ENSGALG00000009422 10 1 - - - 1.000 - - - - - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
83. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - 1.000 - - - - - -
84. ENSGALG00000026368 ENSGALG00000026368 1 1 - - - - - 1.000 - - - -
85. P2RX3 ENSGALG00000040479 5 1 - - - - - 1.000 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
86. SCMH1 ENSGALG00000000672 3 1 - - 1.000 - - - - - - - Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
87. PAPPA ENSGALG00000007079 6 1 - - - - - 1.000 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
88. GPR12 ENSGALG00000017102 4 1 - - - - - 1.000 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
89. FHDC1 ENSGALG00000041054 34 0.998 - - - - - 0.998 - - - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
90. TSPAN18 ENSGALG00000036901 14 0.987 - - - - - 0.987 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
91. ANKRD31 46 0.985 - - - - - 0.985 - - - - ankyrin repeat domain 31, transcript variant X2
92. TBX2 ENSGALG00000034297 57 0.969 - - - 0.969 - - - - - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
93. ENSGALG00000007420 ENSGALG00000007420 7 0.967 - - - 0.967 - - - - - -
94. KCNE3 ENSGALG00000022696 561 0.944 - - - 0.944 - - - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
95. ENSGALG00000028298 ENSGALG00000028298 34 0.944 - - - - - 0.944 - - - -
96. MANSC4 32 0.944 - - - - - 0.944 - - - - MANSC domain containing 4, transcript variant X1
97. FAR-2 FAR-2 24 0.943 - - - - - 0.943 - - - -
98. TNNC2 ENSGALG00000006835 2963 0.935 - - - - - 0.935 - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
99. CD109 ENSGALG00000015910 11 0.928 - - - - - 0.928 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
100. TMEM132E ENSGALG00000002312 16 0.91 - - - - - 0.910 - - - - transmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]

There are 126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA