Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CTSB

Gene Name Gene ID Reads Annotation
CTSB ENSGALG00000030016 177 cathepsin B [Source:NCBI gene;Acc:396329]











Genes with expression patterns similar to CTSB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CTSB ENSGALG00000030016 177 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cathepsin B [Source:NCBI gene;Acc:396329]
2. TMEM248 ENSGALG00000033954 248 1.791 - - - - - - 0.938 0.853 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
3. FBXL18 ENSGALG00000004611 97 1.63 - - - - - - - 0.845 0.785 - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
4. AGPAT5 ENSGALG00000016329 1399 1.529 - - - - - - 0.756 0.773 - - 1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:20886]
5. PLBD1 ENSGALG00000029583 531 1.513 - - - - - - 0.749 0.764 - - phospholipase B domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26215]
6. SGTB ENSGALG00000014768 1065 1.509 - - - - - - 0.742 0.767 - - small glutamine rich tetratricopeptide repeat containing beta [Source:NCBI gene;Acc:427166]
7. ES1ML2 ENSGALG00000007526 179 1.498 - - - - - - - 0.797 - 0.701 ES1 protein homolog, mitochondrial-like 2
8. EXTL2 ENSGALG00000027984 808 1.431 - - - - - - 0.708 0.723 - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
9. SLC27A6 ENSGALG00000000184 98 0.983 - - - - - - 0.983 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
10. RALGAPA2 240 0.981 - - - - - - 0.981 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
11. SKI ENSGALG00000001229 50 0.977 - - - - - - 0.977 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
12. WBP2NL ENSGALG00000011908 23 0.975 - - - - - - 0.975 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
13. ZC3H12C ENSGALG00000017154 59 0.973 - - - - - - 0.973 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
14. CFH ENSGALG00000002431 31 0.973 - - - - - - 0.973 - - - complement factor H, transcript variant X1
15. ENSGALG00000003817 ENSGALG00000003817 45 0.971 - - - - - - 0.971 - - -
16. TMEM150C ENSGALG00000011175 218 0.966 - - - - - - 0.966 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
17. NBEAL2 ENSGALG00000039120 277 0.965 - - - - - - 0.965 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
18. TRPC6 ENSGALG00000029416 281 0.963 - - - - - - 0.963 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
19. MICAL3 ENSGALG00000013042 90 0.963 - - - - - - 0.963 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
20. NCBP2 ENSGALG00000006843 938 0.96 - - - - - - 0.960 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
21. C8G ENSGALG00000040644 443 0.958 - - - - - - 0.958 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
22. GPSM2 ENSGALG00000002090 50 0.956 - - - - - - 0.956 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
23. NPY2R ENSGALG00000009280 29 0.954 - - - - - - 0.954 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
24. DTNBP1 ENSGALG00000012703 539 0.951 - - - - - - 0.951 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
25. ARHGAP20 ENSGALG00000017150 100 0.949 - - - - - - 0.949 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
26. CNTN1 ENSGALG00000009523 158 0.947 - - - - - - 0.947 - - - contactin 1 [Source:NCBI gene;Acc:417786]
27. CCDC135 CCDC135 220 0.945 - - - - - - 0.945 - - -
28. UBAC2 ENSGALG00000016880 1343 0.943 - - - - - - 0.943 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
29. RAPGEF5 ENSGALG00000034024 1264 0.941 - - - - - - 0.941 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
30. ZFHX4 ENSGALG00000037164 811 0.941 - - - - - - 0.941 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
31. PLEK2 ENSGALG00000009562 706 0.932 - - - - - - 0.932 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
32. SLC5A11 ENSGALG00000005933 28 0.93 - - - - - - 0.930 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
33. CCDC117 ENSGALG00000005784 185 0.927 - - - - - - 0.927 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
34. CPE ENSGALG00000027788 153 0.927 - - - - - - 0.927 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
35. CVG1 CVG1 636 0.926 - - - - - - 0.926 - - -
36. TFAP2C ENSGALG00000007690 768 0.925 - - - - - - 0.925 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
37. PLXNB2 ENSGALG00000039861 338 0.921 - - - - - - 0.921 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
38. OSBPL2 ENSGALG00000005195 94 0.917 - - - - - - 0.917 - - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
39. SCN9A ENSGALG00000027793 161 0.917 - - - - - - 0.917 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
40. SHC2 ENSGALG00000001289 2140 0.915 - - - - - - 0.915 - - - SHC (Src homology 2 domain containing) transforming protein 2, transcript variant X2
41. MAN1B1 ENSGALG00000037375 308 0.914 - - - - - - 0.914 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
42. MPP2 ENSGALG00000035580 383 0.914 - - - - - - 0.914 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
43. FICD ENSGALG00000004858 171 0.906 - - - - - - 0.906 - - - FIC domain containing [Source:HGNC Symbol;Acc:HGNC:18416]
44. DENND1A ENSGALG00000001157 503 0.902 - - - - - - 0.902 - - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
45. HPS1 ENSGALG00000017419 700 0.902 - - - - - - - 0.902 - - HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 [Source:NCBI gene;Acc:429879]
46. TM2D1 ENSGALG00000020614 764 0.902 - - - - - - 0.902 - - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
47. PYGO1 ENSGALG00000004369 527 0.902 - - - - - - 0.902 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
48. CSNK1A1 495 0.901 - - - - - - 0.901 - - - casein kinase 1 alpha 1, transcript variant X4
49. SCUBE2 ENSGALG00000032161 63 0.901 - - - - - - 0.901 - - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
50. SSPN ENSGALG00000014042 638 0.896 - - - - - - - 0.896 - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
51. BAI3 BAI3 106 0.895 - - - - - - 0.895 - - -
52. GABRG2 ENSGALG00000038042 211 0.895 - - - - - - 0.895 - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
53. EPHB1 ENSGALG00000006609 346 0.894 - - - - - - 0.894 - - - EPH receptor B1, transcript variant X2
54. WDR59 ENSGALG00000002798 815 0.894 - - - - - - 0.894 - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
55. SNX16 ENSGALG00000029678 1104 0.891 - - - - - - 0.891 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
56. C5NT1AL ENSGALG00000006608 277 0.891 - - - - - - 0.891 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
57. NOL8 ENSGALG00000004750 1433 0.89 - - - - - - 0.890 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
58. NMT2 ENSGALG00000008791 542 0.89 - - - - - - 0.890 - - - N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]
59. ADAMTSL1 1479 0.89 - - - - - - 0.890 - - - ADAMTS like 1, transcript variant X3
60. EREG ENSGALG00000010864 46 0.89 - - - - - - - 0.890 - - epiregulin [Source:NCBI gene;Acc:408036]
61. PC7 PC7 1105 0.885 - - - - - - - 0.885 - -
62. PAPSS2 ENSGALG00000003689 278 0.885 - - - - - - - 0.885 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
63. VPS37B ENSGALG00000003743 185 0.879 - - - - - - 0.879 - - - VPS37B, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:25754]
64. DHX35 ENSGALG00000003658 1090 0.877 - - - - - - 0.877 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
65. OSTM1 ENSGALG00000015306 192 0.877 - - - - - - 0.877 - - - osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
66. PCYOX1L ENSGALG00000040340 2162 0.877 - - - - - - 0.877 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
67. ENSGALG00000005895 ENSGALG00000005895 889 0.876 - - - - - - 0.876 - - -
68. FAM47E-STBD1 FAM47E-STBD1 1148 0.876 - - - - - - 0.876 - - -
69. SCARB2 ENSGALG00000011499 2763 0.876 - - - - - - - 0.876 - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
70. NALCN ENSGALG00000016868 164 0.873 - - - - - - 0.873 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
71. IFT88 1241 0.873 - - - - - - - 0.873 - - intraflagellar transport 88, transcript variant X3
72. CKV1.1 CKV1.1 140 0.873 - - - - - - 0.873 - - -
73. PKP1 ENSGALG00000000299 155 0.871 - - - - - - 0.871 - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
74. GLB1L2 ENSGALG00000001604 4057 0.867 - - - - - - - 0.867 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
75. IMPAD1 ENSGALG00000041573 801 0.867 - - - - - - 0.867 - - - inositol monophosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26019]
76. MEF2D ENSGALG00000037787 1080 0.864 - - - - - - 0.864 - - - myocyte enhancer factor 2D [Source:NCBI gene;Acc:431059]
77. RIMKLB ENSGALG00000040184 281 0.862 - - - - - - 0.862 - - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
78. IMMP2L ENSGALG00000027876 962 0.859 - - - - - - 0.859 - - - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
79. ABHD11 ENSGALG00000001056 1397 0.856 - - - - - - - 0.856 - - abhydrolase domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16407]
80. ATG2B ENSGALG00000042088 918 0.855 - - - - - - 0.855 - - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
81. MAT2A ENSGALG00000015366 17 0.855 - - - - - - - 0.855 - - methionine adenosyltransferase 2A, transcript variant X1
82. ENSGALG00000020883 ENSGALG00000020883 299 0.852 - - - - - - 0.852 - - -
83. RFX2 ENSGALG00000001773 404 0.85 - - - - - - 0.850 - - - regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]
84. IGFBP4 ENSGALG00000040672 608 0.85 - - - - - - - 0.850 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
85. CCK ENSGALG00000029788 213 0.847 - - - - - - 0.847 - - - cholecystokinin [Source:NCBI gene;Acc:414884]
86. OSBP ENSGALG00000030548 439 0.847 - - - - - - - 0.847 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
87. DPYSL4 ENSGALG00000010490 3431 0.846 - - - - - - 0.846 - - - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
88. ADAM17 ENSGALG00000016427 49 0.845 - - - - - - - 0.845 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
89. LOC415478 ENSGALG00000021171 100 0.845 - - - - - - - 0.845 - - transmembrane protein 2-like, transcript variant X2
90. AP1S2 ENSGALG00000016551 421 0.844 - - - - - - 0.844 - - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
91. WNT16 ENSGALG00000028069 157 0.843 - - - - - - - 0.843 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
92. PTDSS2 ENSGALG00000004300 682 0.843 - - - - - - - 0.843 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
93. RBBP8NL ENSGALG00000045938 89 0.843 - - - - - - - 0.843 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
94. FHL1 ENSGALG00000006190 22 0.843 - - - - - - - 0.843 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
95. MIF4GD ENSGALG00000026715 41 0.842 - - - - - - - 0.842 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
96. GLOD5 ENSGALG00000025991 17 0.841 - - - - - - - 0.841 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
97. AVP ENSGALG00000014117 19 0.841 - - - - - - - 0.841 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
98. METTL24 ENSGALG00000041120 60 0.841 - - - - - - - 0.841 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
99. ENSGALG00000026913 ENSGALG00000026913 12 0.841 - - - - - - - 0.841 - -
100. TGM4 ENSGALG00000033171 19 0.841 - - - - - - - 0.841 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]

There are 221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA