Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CSTB

Gene Name Gene ID Reads Annotation
CSTB ENSGALG00000014410 7346 cystatin B [Source:NCBI gene;Acc:418267]











Genes with expression patterns similar to CSTB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CSTB ENSGALG00000014410 7346 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 cystatin B [Source:NCBI gene;Acc:418267]
2. CDC42BPB ENSGALG00000011432 8220 1.429 - - - - - - 0.710 0.719 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
3. PPIE ENSGALG00000013383 3923 0.854 - - - - - - - 0.854 - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
4. NSUN2 ENSGALG00000013064 2005 0.817 - - - - - - 0.817 - - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
5. LOC422426 ENSGALG00000009622 1470 0.808 - - - - - - 0.808 - - - uncharacterized LOC422426, transcript variant X2
6. SEMA4B ENSGALG00000008297 11202 0.807 - - - - - - - 0.807 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
7. WDSUB1 ENSGALG00000012574 2038 0.805 - - - - - - - 0.805 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
8. TRAF7 ENSGALG00000005767 4615 0.803 - - - - - - 0.803 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
9. KIAA0355 ENSGALG00000004949 4352 0.801 - - - - - - 0.801 - - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
10. PTRHD1 ENSGALG00000016610 3636 0.799 - - - - - - - 0.799 - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
11. ME1 ENSGALG00000015849 1169 0.793 - - - - - - - 0.793 - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
12. ARL13B ENSGALG00000015412 2968 0.793 - - - - - - - 0.793 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
13. TBC1D22A ENSGALG00000043058 1614 0.792 - - - - - - - 0.792 - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
14. GLCE ENSGALG00000028191 1170 0.791 - - - - - - - 0.791 - - glucuronic acid epimerase [Source:HGNC Symbol;Acc:HGNC:17855]
15. CPT1A ENSGALG00000007077 3199 0.791 - - - - - - 0.791 - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
16. RELL1 ENSGALG00000014336 2950 0.79 - - - - - - 0.790 - - - RELT like 1 [Source:NCBI gene;Acc:422795]
17. MBNL3 ENSGALG00000032045 10980 0.787 - - - - - - 0.787 - - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
18. CDC42BPA ENSGALG00000009158 3926 0.787 - - - - - - 0.787 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
19. ABCC1 ENSGALG00000006646 2596 0.785 - - - - - - - 0.785 - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
20. TBC1D4 ENSGALG00000016925 2961 0.785 - - - - - - - 0.785 - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
21. MAU2 ENSGALG00000002969 10604 0.782 - - - - - - - 0.782 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
22. MPRIP ENSGALG00000004798 6700 0.782 - - - - - - - 0.782 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
23. RPAP3 ENSGALG00000009743 3380 0.782 - - - - - - 0.782 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
24. KIN ENSGALG00000030702 1608 0.78 - - - - - - - 0.780 - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
25. HAPLN1 ENSGALG00000015627 14942 0.779 - - - - - - 0.779 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
26. YWHAQ ENSGALG00000016433 3450 0.779 - - - - 0.779 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
27. UBE2E1 ENSGALG00000011286 5483 0.779 - - - - - - - 0.779 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
28. FAT4 ENSGALG00000011823 774 0.775 - - - - - - - 0.775 - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
29. PDCD7 ENSGALG00000021027 3807 0.774 - - - - - - 0.774 - - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
30. EGFLAM ENSGALG00000003726 4588 0.773 - - - - - - - 0.773 - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
31. MTDH ENSGALG00000034050 9525 0.772 - - - - - - - 0.772 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
32. INTS2 ENSGALG00000005269 6966 0.772 - - - - - - 0.772 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
33. SYNE1 ENSGALG00000013505 2324 0.772 - - - - - - 0.772 - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
34. DNPEP ENSGALG00000011318 10623 0.77 - - - - - - - 0.770 - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
35. ENSGALG00000014545 ENSGALG00000014545 285 0.77 - - - - - - - 0.770 - -
36. COL18A1 ENSGALG00000038311 11934 0.765 - - - - - - - 0.765 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
37. gga-mir-6587 ENSGALG00000026386 9441 0.764 - - - - - - 0.764 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
38. SLC29A3 1141 0.764 - - - - - - - 0.764 - - solute carrier family 29 member 3
39. VDAC2 ENSGALG00000005002 12592 0.763 - - - - - - 0.763 - - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
40. REEP5 ENSGALG00000023157 6282 0.762 - - - - - - - 0.762 - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
41. RDH10 ENSGALG00000034346 15285 0.761 - - - - - - 0.761 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
42. CRLF3 ENSGALG00000003284 6002 0.761 - - - - - - - 0.761 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
43. EXOSC3 ENSGALG00000002426 7255 0.76 - - - - - - 0.760 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
44. MPPED1 ENSGALG00000014186 5726 0.76 - - - - - - - 0.760 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
45. ESRP2 ENSGALG00000003374 4436 0.76 - - - - - - 0.760 - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
46. NARFL ENSGALG00000005365 2668 0.758 - - - - - - - 0.758 - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
47. NKAP ENSGALG00000020262 3543 0.754 - - - - - - 0.754 - - - NFKB activating protein [Source:NCBI gene;Acc:422368]
48. SYNE2 ENSGALG00000011811 5542 0.753 - - - - - - 0.753 - - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
49. WBSCR22 6082 0.753 - - - - - - - 0.753 - - Williams-Beuren syndrome chromosome region 22
50. HMGB3 ENSGALG00000009071 12011 0.753 - - - - - - 0.753 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
51. UBR2 ENSGALG00000009906 7717 0.752 - - - - - - 0.752 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
52. RAB7B ENSGALG00000000769 438 0.752 - - - - - - - 0.752 - - RAB7B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30513]
53. TET2 ENSGALG00000010592 143 0.751 - - - - - - - 0.751 - - tet methylcytosine dioxygenase 2 [Source:NCBI gene;Acc:422540]
54. HOTAIRM1 HOTAIRM1 4335 0.751 - - - - - - 0.751 - - -
55. UMPS ENSGALG00000011770 11331 0.749 - - - - - - 0.749 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
56. NOA1 ENSGALG00000038585 2907 0.748 - - - - - - - 0.748 - - nitric oxide associated 1 [Source:HGNC Symbol;Acc:HGNC:28473]
57. USP8 ENSGALG00000005894 4499 0.748 - - - - - - - 0.748 - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
58. SAP30 ENSGALG00000036252 2032 0.747 - - - - - - - 0.747 - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
59. GILT GILT 1343 0.747 - - - - - - - 0.747 - -
60. GSTT1L ENSGALG00000005204 476 0.747 - - - - - - - 0.747 - - glutathione S-transferase theta 1-like
61. IFFO1 ENSGALG00000014443 2528 0.746 - - - - - - - 0.746 - - intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:HGNC:24970]
62. Sep-09 Sep-09 4723 0.746 - - - - - - - 0.746 - -
63. CCNC ENSGALG00000015471 6497 0.746 - - - - 0.746 - - - - - cyclin C [Source:NCBI gene;Acc:421791]
64. SPRYD7 ENSGALG00000017010 1910 0.746 - - - - - - 0.746 - - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
65. C12H3ORF37 C12H3ORF37 6362 0.745 - - - - - - - 0.745 - -
66. STAM ENSGALG00000035287 7649 0.745 - - 0.745 - - - - - - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
67. EHD3 ENSGALG00000009086 14407 0.745 - - - - - - 0.745 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
68. SLC1A3 ENSGALG00000003582 2283 0.745 - - - - - - - 0.745 - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
69. ANKZF1 ENSGALG00000011332 2247 0.745 - - - - - - - 0.745 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
70. P4HA2 ENSGALG00000006677 5510 0.742 - - - - - - - 0.742 - - prolyl 4-hydroxylase subunit alpha 2 [Source:NCBI gene;Acc:416326]
71. RERE ENSGALG00000002232 8724 0.742 - - - - - - 0.742 - - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
72. SLC25A36 ENSGALG00000005283 4221 0.741 - - - - - - 0.741 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
73. DCPS ENSGALG00000031143 10191 0.741 - - - - - - 0.741 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
74. C1H12ORF73 ENSGALG00000030933 5195 0.74 - - - - - - - 0.740 - - chromosome 1 open reading frame, human C12orf73 [Source:NCBI gene;Acc:772057]
75. SRFBP1 ENSGALG00000005316 6826 0.739 - - - - - - 0.739 - - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
76. BBOX1 ENSGALG00000013297 4119 0.739 - - - - - - - 0.739 - - gamma-butyrobetaine hydroxylase 1 [Source:HGNC Symbol;Acc:HGNC:964]
77. DERL1 ENSGALG00000033950 15074 0.739 - - - - - - 0.739 - - - derlin 1 [Source:NCBI gene;Acc:420350]
78. TMCO3 ENSGALG00000016824 761 0.738 - - - - - - 0.738 - - - transmembrane and coiled-coil domains 3 [Source:NCBI gene;Acc:395675]
79. PGM1 ENSGALG00000011016 3391 0.738 - - - - - - 0.738 - - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
80. ITGB1 ENSGALG00000007145 19551 0.736 - - - - - - 0.736 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
81. ADPRHL2 ENSGALG00000002304 2674 0.736 - - 0.736 - - - - - - - ADP-ribosylhydrolase like 2 [Source:NCBI gene;Acc:419626]
82. ENSGALG00000009771 ENSGALG00000009771 10273 0.736 - - - - - - 0.736 - - -
83. APITD1 APITD1 11830 0.736 - - - - - - - 0.736 - -
84. RBM7 ENSGALG00000007017 8779 0.736 - - - - - - 0.736 - - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
85. TET1 ENSGALG00000031604 13002 0.735 - - - - - - 0.735 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
86. TMEM19 ENSGALG00000041783 1545 0.734 - - - - 0.734 - - - - - transmembrane protein 19 [Source:HGNC Symbol;Acc:HGNC:25605]
87. C12orf5 C12orf5 1463 0.734 - - - - - - - 0.734 - -
88. COQ3 ENSGALG00000015486 3508 0.732 - - - - - - - 0.732 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
89. LMAN1 ENSGALG00000034821 12788 0.732 - - - - - - 0.732 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
90. PRKCD ENSGALG00000002016 1476 0.732 - - - - - - - 0.732 - - protein kinase C delta [Source:NCBI gene;Acc:415905]
91. NHE1 NHE1 1117 0.732 - - - - 0.732 - - - - -
92. EMILIN2 ENSGALG00000032997 2460 0.732 - - - - - - 0.732 - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
93. MRPL38 ENSGALG00000002194 6648 0.732 - - - - - - 0.732 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
94. ATPBD4 ATPBD4 1823 0.731 - - - - - - - 0.731 - -
95. SCLY ENSGALG00000030194 3025 0.731 - - - - - - 0.731 - - - selenocysteine lyase [Source:NCBI gene;Acc:424739]
96. IRAK1BP1 ENSGALG00000015892 2236 0.731 - - - - - - 0.731 - - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
97. RTN4R ENSGALG00000007732 1515 0.731 - - - - - - 0.731 - - - reticulon 4 receptor
98. ANKRD13C ENSGALG00000031210 2152 0.731 - - - - 0.731 - - - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
99. POLR1E ENSGALG00000005395 8953 0.73 - - - - - - 0.730 - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
100. TMED3 ENSGALG00000008272 2838 0.73 - - - - - - - 0.730 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]

There are 93 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA