Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CSPG5

Gene Name Gene ID Reads Annotation
CSPG5 ENSGALG00000032184 991 chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]











Genes with expression patterns similar to CSPG5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CSPG5 ENSGALG00000032184 991 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
2. HES5 ENSGALG00000001141 6514 3.972 - - 0.829 0.927 0.791 0.719 - - 0.706 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
3. PTPRZ1 ENSGALG00000040114 3410 3.895 - - 0.755 0.865 0.829 0.712 0.734 - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
4. TAGLN3 ENSGALG00000015379 7865 3.79 - - 0.839 0.760 0.727 - - - 0.733 0.731 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
5. ENSGALG00000027002 ENSGALG00000027002 7570 3.751 - - 0.842 0.712 0.750 - - - 0.722 0.725
6. NHLH1 ENSGALG00000025817 1617 3.736 - - 0.758 0.736 0.705 0.701 0.836 - - - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
7. CRABP-I ENSGALG00000003193 67258 3.201 - - 0.788 0.911 - 0.789 - - 0.713 - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
8. PAX-6 PAX-6 2650 3.147 - - 0.812 0.823 0.767 - 0.745 - - -
9. DLL1 ENSGALG00000011182 1613 2.969 - - - 0.775 - 0.737 0.734 - - 0.723 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
10. SRGAP3 ENSGALG00000008378 4331 2.943 - - 0.751 0.750 - 0.739 0.703 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
11. ZIC1 ENSGALG00000040532 6543 2.453 - - 0.744 0.870 - 0.839 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
12. MARCKSL1 ENSGALG00000032335 88728 2.332 - - 0.744 0.783 - 0.805 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
13. WSCD2 ENSGALG00000004849 477 2.328 - - 0.820 0.777 - 0.731 - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
14. OPTC ENSGALG00000003554 3698 2.309 - - 0.731 0.780 - 0.798 - - - - opticin [Source:NCBI gene;Acc:395130]
15. CERCAM ENSGALG00000004986 5158 2.307 - - 0.707 - 0.780 0.820 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
16. CRMP1B CRMP1B 18633 2.266 - - 0.766 0.780 0.720 - - - - -
17. GADD45_1 GADD45_1 1433 2.256 - - - - 0.722 0.780 0.754 - - -
18. RGCC ENSGALG00000016954 1282 2.223 - - - 0.726 0.795 0.702 - - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
19. IRX1 ENSGALG00000030991 1474 2.181 - - - - - 0.755 0.726 - - 0.700 iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
20. GPM6A ENSGALG00000043480 2133 2.157 - - - - 0.711 - 0.700 - - 0.746 glycoprotein M6A [Source:NCBI gene;Acc:422569]
21. ENSGALG00000027373 ENSGALG00000027373 2129 1.632 - - 0.814 0.818 - - - - - -
22. PROCA1 668 1.623 - - 0.853 - - 0.770 - - - - protein interacting with cyclin A1
23. HOXD4 ENSGALG00000023419 6073 1.62 - - - 0.780 0.840 - - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
24. NEFM ENSGALG00000000317 6992 1.604 - - - - 0.772 0.832 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
25. HOXB-7 HOXB-7 2066 1.588 - - 0.719 0.869 - - - - - -
26. LFNG ENSGALG00000038515 5178 1.58 - - 0.732 - - 0.848 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
27. DRAXIN ENSGALG00000004631 3122 1.55 - - - 0.831 - 0.719 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
28. DBX1 ENSGALG00000003965 1432 1.544 - - - - 0.706 - 0.838 - - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
29. TMSB10 TMSB10 518 1.539 - - 0.730 - - - - - - 0.809
30. RGMA ENSGALG00000039173 12874 1.527 - - - - - - 0.700 - - 0.827 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
31. RASSF2 ENSGALG00000030432 4822 1.518 - - 0.751 - - 0.767 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
32. PRDM8 ENSGALG00000038372 928 1.507 - - 0.710 - - - - - - 0.797 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
33. HES6 ENSGALG00000028415 4830 1.5 - - - 0.723 0.777 - - - - - hes family bHLH transcription factor 6
34. ALDOC ENSGALG00000026077 106910 1.496 - - 0.722 - - 0.774 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
35. SHISA3 ENSGALG00000026042 1108 1.494 - - - - - - 0.704 - - 0.790 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
36. PAX-7 PAX-7 3856 1.493 - - - 0.729 - 0.764 - - - -
37. GRM4 ENSGALG00000002840 2250 1.489 - - - - - 0.738 0.751 - - - glutamate receptor, metabotropic 4, transcript variant X2
38. CHGA ENSGALG00000010820 1028 1.483 - - - 0.737 0.746 - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
39. NFASC ENSGALG00000031776 4264 1.481 - - - 0.759 - 0.722 - - - - neurofascin [Source:NCBI gene;Acc:419824]
40. RTN1 ENSGALG00000012006 2438 1.476 - - 0.759 - 0.717 - - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
41. ZIC3 ENSGALG00000031144 863 1.455 - - - 0.708 - 0.747 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
42. SALL1 ENSGALG00000039238 3740 1.453 - - 0.742 - 0.711 - - - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
43. WNT4 ENSGALG00000041708 1277 1.448 - - - 0.713 - 0.735 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
44. CHL1 ENSGALG00000037856 1565 1.437 - - - 0.728 - 0.709 - - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
45. LRRN1 ENSGALG00000035099 684 1.411 - - - - 0.705 - 0.706 - - - leucine rich repeat neuronal 1 [Source:NCBI gene;Acc:771599]
46. NBEAL1 ENSGALG00000008786 104 0.896 - - - - - - - 0.896 - - neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]
47. ASTN1 ENSGALG00000004472 855 0.836 - - - - - 0.836 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
48. NEFL ENSGALG00000000314 4883 0.836 - - - - - 0.836 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
49. KRT14 ENSGALG00000003690 682 0.825 - - - - - - - 0.825 - - keratin 14 [Source:NCBI gene;Acc:408039]
50. ZNF488 ENSGALG00000005975 82 0.823 - - - - - - - - - 0.823 zinc finger protein 488, transcript variant X2
51. HOXB2 ENSGALG00000025774 5280 0.822 - - - - - 0.822 - - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
52. FZD3 ENSGALG00000042308 3356 0.818 - - - - - 0.818 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
53. TCAIM ENSGALG00000011498 30 0.809 - - - - - - - 0.809 - - T-cell activation inhibitor, mitochondrial [Source:NCBI gene;Acc:420670]
54. ZBTB16 ENSGALG00000038540 5544 0.809 - - - - - 0.809 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
55. ELAVL4 ENSGALG00000010533 4978 0.808 - - - - 0.808 - - - - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
56. NTN3 ENSGALG00000029072 1368 0.804 - - 0.804 - - - - - - - netrin 1 [Source:NCBI gene;Acc:396387]
57. NPAS3 ENSGALG00000029022 1950 0.801 - - - - - 0.801 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
58. FABP7 ENSGALG00000038933 6780 0.795 - - - - - 0.795 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
59. MURC 3759 0.795 - - - - - 0.795 - - - - muscle related coiled-coil protein
60. DENND5B 4077 0.789 - - - - - 0.789 - - - - DENN domain containing 5B, transcript variant X1
61. ENSGALG00000022967 ENSGALG00000022967 240 0.788 - - - - - 0.788 - - - -
62. DCLK2 ENSGALG00000032386 2253 0.778 - - - - - 0.778 - - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
63. ENSGALG00000015097 ENSGALG00000015097 93 0.776 - - - - - - - 0.776 - -
64. DAZL ENSGALG00000011243 34 0.771 - - - - - - - 0.771 - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
65. NSG1 ENSGALG00000015010 5829 0.77 - - - - - 0.770 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
66. SV2B ENSGALG00000030250 164 0.77 - - - - - 0.770 - - - - synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
67. GDPD4 ENSGALG00000000690 824 0.769 - - - - 0.769 - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
68. TCF15 ENSGALG00000026276 3646 0.766 - - - - - - 0.766 - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
69. EN1 ENSGALG00000042389 3051 0.76 - - - - - - - - - 0.760 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
70. NCAM1 ENSGALG00000007839 19929 0.759 - - - 0.759 - - - - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
71. BTBD17 ENSGALG00000023359 87 0.759 - - - - - 0.759 - - - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
72. CKB ENSGALG00000011511 2100 0.758 - - - - - 0.758 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
73. RTDR1 RTDR1 104 0.758 - - - - - - 0.758 - - -
74. ING5 ENSGALG00000006317 149 0.756 - - - - - - - 0.756 - - inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
75. LIPG ENSGALG00000043734 2490 0.755 - - - - - 0.755 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
76. CDCA3 ENSGALG00000014513 17047 0.753 - - - - - 0.753 - - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
77. GNG10 ENSGALG00000015683 6905 0.752 - - - - - 0.752 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
78. THSD7A ENSGALG00000010718 149 0.75 - - - - - 0.750 - - - - thrombospondin type 1 domain containing 7A [Source:HGNC Symbol;Acc:HGNC:22207]
79. EPHA3 ENSGALG00000015403 9811 0.749 - - - 0.749 - - - - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
80. PKM ENSGALG00000001992 93960 0.748 - - 0.748 - - - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
81. COL14A1 ENSGALG00000037675 2652 0.748 - - - - - 0.748 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
82. MAP1A ENSGALG00000008425, ENSGALG00000035587 1843 0.748 - - - - - 0.748 - - - - microtubule associated protein 1A, transcript variant X6
83. SPHKAP ENSGALG00000002974 80 0.747 - - - - - - 0.747 - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
84. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.747 - - 0.747 - - - - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
85. GGMOXR1 GGMOXR1 6734 0.744 - - - - - - 0.744 - - -
86. STOX2 ENSGALG00000010646 1161 0.742 - - - - - - 0.742 - - - storkhead box 2 [Source:HGNC Symbol;Acc:HGNC:25450]
87. LRRC4C ENSGALG00000007948 9 0.741 - - - - - 0.741 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
88. MFSD2A ENSGALG00000003879 5455 0.74 - - - - - 0.740 - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
89. MPHOSPH9 ENSGALG00000003419 227 0.74 - - - - - - - - - 0.740 M-phase phosphoprotein 9 [Source:HGNC Symbol;Acc:HGNC:7215]
90. ELAVL2 ENSGALG00000015799 585 0.736 - - - - 0.736 - - - - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
91. SLC35F1 ENSGALG00000029011 14728 0.736 - - - - - 0.736 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
92. C1QTNF3 ENSGALG00000027887 8646 0.733 - - - - - - - - - 0.733 C1q and tumor necrosis factor related protein 3, transcript variant X1
93. NIN ENSGALG00000012361 2284 0.732 - - - - - 0.732 - - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
94. HSPB8 ENSGALG00000007383 5333 0.731 - - - - - - 0.731 - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
95. LOC419390 ENSGALG00000001136 607 0.73 - - 0.730 - - - - - - - hairy and enhancer of split 5-like, transcript variant X1
96. FGFR3 ENSGALG00000015708 16853 0.729 - - - - - 0.729 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
97. PSMA7 ENSGALG00000030411 42436 0.728 - - - 0.728 - - - - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
98. UNC45B ENSGALG00000002186 399 0.727 - - - - - - 0.727 - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
99. FAM110A ENSGALG00000046425 5558 0.725 - - - - - - - - - 0.725 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
100. KRT14_1 ENSGALG00000003690 93 0.723 - - - - - - - 0.723 - - keratin 14 [Source:NCBI gene;Acc:408039]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA