Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CSMD3

Gene Name Gene ID Reads Annotation
CSMD3 ENSGALG00000031578 23 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]











Genes with expression patterns similar to CSMD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CSMD3 ENSGALG00000031578 23 5 - - 1.000 1.000 1.000 - 1.000 - - 1.000 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
2. NOG ENSGALG00000003114 12 2 - - 1.000 - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
3. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
4. KLF11 ENSGALG00000016440 65 1 - - 1.000 - - - - - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
5. NANOG ENSGALG00000027772 89 1 - - 1.000 - - - - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
6. MMP9 ENSGALG00000006992 78 1 - - - - - - 1.000 - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
7. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - 1.000 - - -
8. TNFRSF9 9 1 - - - - - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
9. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
10. LYSMD4 ENSGALG00000007092 1 1 - - 1.000 - - - - - - - LysM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:26571]
11. PROC ENSGALG00000001780 26 1 - - 1.000 - - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
12. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
13. FZD10 ENSGALG00000042003 11 1 - - - - - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
14. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
15. SS18L1 ENSGALG00000005145 14 1 - - 1.000 - - - - - - - SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
16. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
17. RMDN2 ENSGALG00000010554 16 1 - - 1.000 - - - - - - - regulator of microtubule dynamics 2, transcript variant X1
18. TECPR1 ENSGALG00000003507 20 1 - - 1.000 - - - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
19. BFGF BFGF 1 1 - - 1.000 - - - - - - -
20. PDCL2 ENSGALG00000013783 9 1 - - 1.000 - - - - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
21. ANKRD29 ENSGALG00000015034 1 1 - - 1.000 - - - - - - - ankyrin repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:27110]
22. COL25A1 ENSGALG00000039411 5 1 - - - - - - 1.000 - - - collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
23. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - 1.000 - - -
24. B3GALT1 ENSGALG00000010931 6 1 - - 1.000 - - - - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
25. GAB3 ENSGALG00000008408 19 1 - - - - - - 1.000 - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
26. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -
27. SLC25A22 ENSGALG00000039335 2 1 - - - - - - 1.000 - - - solute carrier family 25 member 22 [Source:NCBI gene;Acc:429678]
28. TPO ENSGALG00000016370 98 1 - - - - - - 1.000 - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
29. YTHDF3 ENSGALG00000039774 170 1 - - - - - - 1.000 - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
30. FAM60A FAM60A 109 1 - - - - - - 1.000 - - -
31. ENSGALG00000006384 ENSGALG00000006384 3 1 - - - - - - 1.000 - - -
32. gga-mir-6699 ENSGALG00000027236 1 1 - - 1.000 - - - - - - - gga-mir-6699 [Source:miRBase;Acc:MI0022521]
33. NUAK1 ENSGALG00000012662 411 1 - - - - - - 1.000 - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
34. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
35. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
36. PLEKHM3 ENSGALG00000008479 3 1 - - 1.000 - - - - - - - pleckstrin homology domain containing M3 [Source:HGNC Symbol;Acc:HGNC:34006]
37. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
38. C3orf52 C3orf52 1 1 - - 1.000 - - - - - - -
39. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
40. IL12RB2 ENSGALG00000011222 2 1 - - 1.000 - - - - - - - interleukin 12 receptor subunit beta 2 [Source:NCBI gene;Acc:424705]
41. DGKI ENSGALG00000012890 3 1 - - 1.000 - - - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
42. LRFN2 ENSGALG00000010050 28 1 - - - - - - 1.000 - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
43. TEX2L ENSGALG00000005421 52 1 - - 1.000 - - - - - - - testis expressed 2-like, transcript variant X1
44. PKN2 ENSGALG00000006237 37 1 - - - - - - 1.000 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
45. Mar-04 Mar-04 7 1 - - - - - - 1.000 - - -
46. MC5R ENSGALG00000032087 2 1 - - - - - - 1.000 - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
47. TSPAN8 ENSGALG00000010152 2666 1 - - 1.000 - - - - - - - tetraspanin 8 [Source:NCBI gene;Acc:417854]
48. LPAR5 ENSGALG00000014455 10 1 - - - - - - 1.000 - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
49. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
50. FAM46C 13 1 - - 1.000 - - - - - - - family with sequence similarity 46 member C
51. CLRN2 ENSGALG00000027453 3 1 - - - - - - 1.000 - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
52. HPDL ENSGALG00000023348 1 1 - - 1.000 - - - - - - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
53. MSANTD1 ENSGALG00000015628 154 1 - - 1.000 - - - - - - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
54. C21H1orf158 C21H1orf158 1 1 - - 1.000 - - - - - - -
55. NDEL1 ENSGALG00000001163 16 1 - - - - - - 1.000 - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
56. ENSGALG00000020283 ENSGALG00000020283 10 1 - - 1.000 - - - - - - -
57. CMBL ENSGALG00000013033 3 1 - - - - - - 1.000 - - - carboxymethylenebutenolidase homolog, transcript variant X4
58. PCYT1B 190 1 - - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
59. TMTC1 ENSGALG00000012956 160 1 - - - - - - 1.000 - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
60. JDP2 ENSGALG00000010322 11 1 - - - - - - 1.000 - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
61. LOC100858797 ENSGALG00000027167 7 1 - - 1.000 - - - - - - - feather keratin 1-like, transcript variant X1
62. OBSL1 ENSGALG00000011242 22 1 - - - - - - 1.000 - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
63. BEST1 ENSGALG00000007217 1 1 - - 1.000 - - - - - - - bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
64. DCAKD ENSGALG00000000870 4 1 - - 1.000 - - - - - - - dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
65. ARHGEF5 ENSGALG00000017276 32 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 5, transcript variant X5
66. SYT9 ENSGALG00000005265 34 1 - - 1.000 - - - - - - - synaptotagmin 9 [Source:HGNC Symbol;Acc:HGNC:19265]
67. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
68. DAGLA ENSGALG00000036492 3 1 - - 1.000 - - - - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
69. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
70. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
71. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
72. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
73. UBAP1 ENSGALG00000021378 11 1 - - - - - - 1.000 - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
74. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
75. TECTA ENSGALG00000040857 1 1 - - 1.000 - - - - - - - tectorin alpha [Source:NCBI gene;Acc:395686]
76. GLRA4 ENSGALG00000004936 23 1 - - - - - - 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
77. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
78. SNX13 ENSGALG00000010840 13 1 - - - - - - 1.000 - - - sorting nexin 13 [Source:NCBI gene;Acc:420598]
79. MMP11 ENSGALG00000005968 3 1 - - 1.000 - - - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
80. OVCH2 ENSGALG00000005318 8 1 - - 1.000 - - - - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
81. ENSGALG00000026003 ENSGALG00000026003 1 1 - - 1.000 - - - - - - -
82. SUFU ENSGALG00000008096 307 1 - - - - - - 1.000 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
83. RALYL ENSGALG00000036938 1 1 - - 1.000 - - - - - - - RALY RNA binding protein like [Source:NCBI gene;Acc:420203]
84. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
85. S1PR1 ENSGALG00000005208 12 0.98 - - - - - - - - - 0.980 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
86. PRTFDC1 ENSGALG00000007694 111 0.98 - - - - - - - - - 0.980 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
87. LPGAT1 ENSGALG00000009848 33 0.979 - - - - - - - - - 0.979 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
88. TPCN2 ENSGALG00000007550 10 0.976 - - - - - - - - - 0.976 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
89. PAG1 ENSGALG00000034188 9 0.976 - - - - - - - - - 0.976 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
90. LANCL3 ENSGALG00000016265 9 0.975 - - - - - - - - - 0.975 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
91. HERPUD1 ENSGALG00000001220 18 0.973 - - - - - - - - - 0.973 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
92. FANCA ENSGALG00000000516 250 0.972 - - - - - - - - - 0.972 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
93. FER1L6 ENSGALG00000033783 196 0.971 - - - - - - - - - 0.971 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
94. EHD4 ENSGALG00000008950 22 0.97 - - - - - - - - - 0.970 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
95. SCL SCL 69 0.969 - - - - - - - - - 0.969
96. CCP110 ENSGALG00000006925 59 0.967 - - - - - - - - - 0.967 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
97. LONRF2 ENSGALG00000016768 193 0.966 - - - - - - - - - 0.966 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
98. WDR63 ENSGALG00000008696 15 0.964 - - - - - - - - - 0.964 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
99. SIAT7E SIAT7E 13 0.961 - - - - - - - - - 0.961
100. AKAP10 ENSGALG00000004679 103 0.958 - - - - - - - - - 0.958 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA