Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for CSMD2

Gene Name Gene ID Reads Annotation
CSMD2 ENSGALG00000030229 716 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]











Genes with expression patterns similar to CSMD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. CSMD2 ENSGALG00000030229 716 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
2. NPTXR ENSGALG00000041604 256 1.525 - - 0.707 - - - - - - 0.818 neuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]
3. SP2 ENSGALG00000000233 43 0.925 - - - - - - - - - 0.925 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
4. PRTFDC1 ENSGALG00000007694 111 0.924 - - - - - - - - - 0.924 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
5. LONRF2 ENSGALG00000016768 193 0.918 - - - - - - - - - 0.918 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
6. SIAT7E SIAT7E 13 0.918 - - - - - - - - - 0.918
7. FANCA ENSGALG00000000516 250 0.916 - - - - - - - - - 0.916 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
8. PAG1 ENSGALG00000034188 9 0.916 - - - - - - - - - 0.916 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
9. TPCN2 ENSGALG00000007550 10 0.916 - - - - - - - - - 0.916 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
10. LANCL3 ENSGALG00000016265 9 0.915 - - - - - - - - - 0.915 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
11. XYLT1 ENSGALG00000006757 169 0.915 - - - - - - - - - 0.915 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
12. HERPUD1 ENSGALG00000001220 18 0.915 - - - - - - - - - 0.915 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
13. LPGAT1 ENSGALG00000009848 33 0.915 - - - - - - - - - 0.915 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
14. FAM160A2 ENSGALG00000003416 23 0.913 - - - - - - - - - 0.913 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
15. GAA ENSGALG00000038853 158 0.913 - - - - - - - - - 0.913 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
16. WDR63 ENSGALG00000008696 15 0.912 - - - - - - - - - 0.912 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
17. AKAP10 ENSGALG00000004679 103 0.91 - - - - - - - - - 0.910 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
18. EHD4 ENSGALG00000008950 22 0.91 - - - - - - - - - 0.910 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
19. RAD54L2 ENSGALG00000003243 187 0.909 - - - - - - - - - 0.909 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
20. S1PR1 ENSGALG00000005208 12 0.906 - - - - - - - - - 0.906 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
21. ENSGALG00000009344 ENSGALG00000009344 330 0.905 - - - - - - - - - 0.905
22. FER1L6 ENSGALG00000033783 196 0.905 - - - - - - - - - 0.905 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
23. RASA4 ENSGALG00000001876 178 0.905 - - - - - - - - - 0.905 RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
24. SCL SCL 69 0.903 - - - - - - - - - 0.903
25. CSMD3 ENSGALG00000031578 23 0.899 - - - - - - - - - 0.899 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
26. ATP6AP2 ENSGALG00000016241 257 0.899 - - - - - - - - - 0.899 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
27. GPR180 ENSGALG00000016897 1545 0.898 - - - - - - - - - 0.898 G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
28. CCP110 ENSGALG00000006925 59 0.898 - - - - - - - - - 0.898 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
29. MCMBP ENSGALG00000009455 90 0.896 - - - - - - - - - 0.896 minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
30. FAM161A ENSGALG00000008810 36 0.896 - - - - - - - - - 0.896 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
31. ZNF330 ENSGALG00000009868 257 0.895 - - - - - - - - - 0.895 zinc finger protein 330 [Source:NCBI gene;Acc:422453]
32. POLR3B ENSGALG00000012655 704 0.894 - - - - - - - - - 0.894 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
33. PIGV ENSGALG00000039883 32 0.891 - - - - - - - - - 0.891 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
34. SLC7A9 ENSGALG00000021158 1737 0.89 - - - - - - - - - 0.890 solute carrier family 7 member 9 [Source:NCBI gene;Acc:415768]
35. C5 ENSGALG00000001565 142 0.889 - - - - - - - 0.889 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
36. MRVI1 ENSGALG00000005632 450 0.888 - - - - - - - - - 0.888 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
37. ZNF839 ENSGALG00000011368 148 0.887 - - - - - - - - - 0.887 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
38. CHD2 ENSGALG00000006949 1076 0.885 - - - - - - - - - 0.885 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
39. GLOD5 ENSGALG00000025991 17 0.884 - - - - - - - 0.884 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
40. SELP 28 0.883 - - - - - - - 0.883 - - selectin P, transcript variant X9
41. FKBP8 ENSGALG00000003357 942 0.883 - - - - - - - - - 0.883 FK506 binding protein 8 [Source:NCBI gene;Acc:420123]
42. CSRP3 ENSGALG00000004044 456 0.881 - - - - - - - - - 0.881 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
43. RIT1 ENSGALG00000014647 7174 0.879 - - - - - - - - - 0.879 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
44. EPC1 ENSGALG00000007169 101 0.879 - - - - - - - - - 0.879 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
45. BAAT ENSGALG00000040619 579 0.878 - - - - - - - 0.878 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
46. PDK1 ENSGALG00000013235 238 0.877 - - - - - - - - - 0.877 pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
47. TRUB1 ENSGALG00000009091 1005 0.877 - - - - - - - 0.877 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
48. ACSF3 ENSGALG00000035225 261 0.875 - - - - - - - - - 0.875 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
49. PEX1 ENSGALG00000009410 902 0.873 - - - - - - - - - 0.873 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
50. SCAF4 ENSGALG00000033965 2027 0.873 - - - - - - - - - 0.873 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
51. PLEKHA1 ENSGALG00000034548 34 0.87 - - - - - - - - - 0.870 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
52. PRODH ENSGALG00000007728 1659 0.869 - - - - - - - - - 0.869 proline dehydrogenase 1
53. ENSGALG00000016213 ENSGALG00000016213 33 0.869 - - - - - - - 0.869 - -
54. ETNPPL ENSGALG00000034741 39 0.867 - - - - - - - - - 0.867 ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
55. ENSGALG00000021439 ENSGALG00000021439 628 0.866 - - - - - - - - - 0.866
56. JAG1 ENSGALG00000009020 25 0.866 - - - - - - - - - 0.866 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
57. RAB19 ENSGALG00000012850 155 0.865 - - - - - - - 0.865 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
58. IFT172 ENSGALG00000016509 1226 0.865 - - - - - - - - - 0.865 intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
59. SORCS1 ENSGALG00000008465 468 0.865 - - - - - - - - - 0.865 sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
60. DRD3 ENSGALG00000015117 469 0.864 - - - - - - - 0.864 - - dopamine receptor D3 [Source:HGNC Symbol;Acc:HGNC:3024]
61. KIF13B 291 0.864 - - - - - - - - - 0.864 kinesin family member 13B, transcript variant X3
62. ARHGAP42 ENSGALG00000017196 240 0.863 - - - - - - - - - 0.863 Rho GTPase activating protein 42 [Source:HGNC Symbol;Acc:HGNC:26545]
63. PAPSS2 ENSGALG00000003689 278 0.863 - - - - - - - 0.863 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
64. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.863 - - - - - - - - - 0.863
65. ENSGALG00000001886 ENSGALG00000001886 1024 0.862 - - - - - - - 0.862 - -
66. SLITRK4 ENSGALG00000007242 165 0.862 - - - - - - - - - 0.862 SLIT and NTRK like family member 4 [Source:HGNC Symbol;Acc:HGNC:23502]
67. PLXNC1 ENSGALG00000011309 69 0.862 - - - - - - - 0.862 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
68. UBAC1 ENSGALG00000042564 598 0.861 - - - - - - - - - 0.861 UBA domain containing 1 [Source:NCBI gene;Acc:427754]
69. IPMK ENSGALG00000002710 40 0.861 - - - - - - - - - 0.861 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
70. RFX3 ENSGALG00000010179 305 0.86 - - - - - - - - - 0.860 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
71. C8H1ORF27 C8H1ORF27 516 0.86 - - - - - - - - - 0.860
72. ENSGALG00000026309 ENSGALG00000026309 360 0.86 - - - - - - - - - 0.860
73. ECHDC1 ENSGALG00000014828 958 0.859 - - - - - - - - - 0.859 ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
74. CSGALNACT2 ENSGALG00000002543 138 0.859 - - - - - - - - - 0.859 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24292]
75. NKIRAS1 ENSGALG00000011289 311 0.858 - - - - - - - - - 0.858 NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
76. APBA1 ENSGALG00000015111 261 0.858 - - - - - - - - - 0.858 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
77. GRIN3B ENSGALG00000026241 177 0.857 - - - - - - - - - 0.857 glutamate ionotropic receptor NMDA type subunit 3B [Source:HGNC Symbol;Acc:HGNC:16768]
78. OSTM1 ENSGALG00000015306 192 0.857 - - - - - - - - - 0.857 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
79. WNK4 ENSGALG00000032191 962 0.857 - - - - - - - - - 0.857 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
80. GRHPR ENSGALG00000005423 1567 0.856 - - - - - - - 0.856 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
81. ADAM17 ENSGALG00000016427 49 0.855 - - - - - - - 0.855 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
82. TLN1 ENSGALG00000002548 489 0.854 - - - - - - - - - 0.854 talin 1 [Source:NCBI gene;Acc:395194]
83. HENMT1 ENSGALG00000001959 194 0.854 - - - - - - - - - 0.854 HEN1 methyltransferase homolog 1 [Source:NCBI gene;Acc:429055]
84. RFESD ENSGALG00000014673 198 0.853 - - - - - - - - - 0.853 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
85. CEP68 ENSGALG00000008787 1591 0.853 - - - - - - - - - 0.853 centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]
86. UGT8L ENSGALG00000005599 93 0.852 - - - - - - - 0.852 - - UDP glycosyltransferase 8-like
87. PC7 PC7 1105 0.852 - - - - - - - 0.852 - -
88. ENSGALG00000027352 ENSGALG00000027352 69 0.852 - - - - - - - 0.852 - -
89. MIF4GD ENSGALG00000026715 41 0.851 - - - - - - - 0.851 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
90. FBXL18 ENSGALG00000004611 97 0.851 - - - - - - - 0.851 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
91. GJB1 ENSGALG00000005541 261 0.851 - - - - - - - 0.851 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
92. C1QA ENSGALG00000021569 343 0.851 - - - - - - - 0.851 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
93. AVP ENSGALG00000014117 19 0.85 - - - - - - - 0.850 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
94. CYP3A4 ENSGALG00000004436 75 0.85 - - - - - - - 0.850 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
95. METTL24 ENSGALG00000041120 60 0.85 - - - - - - - 0.850 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
96. ENSGALG00000026913 ENSGALG00000026913 12 0.85 - - - - - - - 0.850 - -
97. WNT16 ENSGALG00000028069 157 0.848 - - - - - - - 0.848 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
98. ARSD ENSGALG00000016648 33 0.848 - - - - - - - 0.848 - - arylsulfatase D, transcript variant X1
99. ADC ADC 178 0.848 - - - - - - - - - 0.848
100. PLCG2 ENSGALG00000033507 348 0.847 - - - - - - - - - 0.847 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]

There are 295 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA