Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for CSF3

Gene Name Gene ID Reads Annotation
CSF3 CSF3 4










Genes with expression patterns similar to CSF3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. CSF3 CSF3 4 4 - - - 1.000 1.000 - 1.000 - 1.000
2. si:ch73-115f13.1 si:ch73-115f13.1 15 1.974 - - - 0.974 - - 1.000 - -
3. zgc:109965 ENSDARG00000012126 11 1.972 - - - 0.972 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
4. si:ch73-6k14.2 ENSDARG00000096031 16 1.936 - - - 0.979 - - 0.957 - - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
5. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.92 - - - 0.962 0.958 - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
6. fam131c ENSDARG00000037320 6 1.905 - - - 0.979 0.926 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
7. tfap2d ENSDARG00000023272 308 1.873 - - - 0.951 0.922 - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
8. grid1b ENSDARG00000044161 20 1.869 - - - - - - 1.000 - 0.869 glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
9. RCVRN_1 RCVRN_1 46 1.842 - - - 0.851 0.991 - - - -
10. CABZ01071911.2 CABZ01071911.2 64 1.804 - - - - - - 0.921 - 0.883
11. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1.798 - - - - - - 0.887 - 0.911 arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
12. smtna ENSDARG00000074652 6 1.78 - - - - 0.780 - - - 1.000 smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
13. SLC5A6 SLC5A6 179 1.718 - - - - - - 0.934 - 0.784
14. rpe65a ENSDARG00000007480 52 1.715 - - - 0.752 0.963 - - - - retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
15. CUL9 2 1.712 - - - 0.979 0.733 - - - - cullin 9
16. slco2a1 ENSDARG00000061896 58 1.712 - - - - - - 1.000 - 0.712 solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
17. gnb3b ENSDARG00000002696 46 1.694 - - - 0.977 0.717 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
18. dnd dnd 33 1.674 - - - - - - 0.965 - 0.709
19. si:dkey-14d8.2 38 1.643 - - - - 0.733 - 0.910 - - si:dkey-14d8.2
20. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.522 - - - 0.728 - - 0.794 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
21. HYKK_1 HYKK_1 4 1 - - - - - - 1.000 - -
22. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
23. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
24. GPR114 GPR114 1 1 - - - - - - 1.000 - -
25. UHRF2 UHRF2 1 1 - - - - - - - - 1.000
26. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
27. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
28. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
29. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
30. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
31. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
32. KRT9 KRT9 7 1 - - - - 1.000 - - - -
33. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
34. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
35. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
36. TNFRSF14_4 TNFRSF14_4 5 1 - - - - - - 1.000 - -
37. M1AP ENSDARG00000099485 1 1 - - - - - - 1.000 - - meiosis 1 associated protein [Source:ZFIN;Acc:ZDB-GENE-070410-19]
38. EFEMP1_1 EFEMP1_1 8 1 - - - - - - 1.000 - -
39. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
40. PLXNB2_1 PLXNB2_1 10 1 - - - - - - 1.000 - -
41. CU457778.1 ENSDARG00000098976 38 1 - - - - - - 1.000 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
42. cldn11a ENSDARG00000020031 284 1 - - - - - - 1.000 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
43. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
44. ciita ENSDARG00000090851 5 1 - - - - - - 1.000 - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
45. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - - - - 1.000 - -
46. SOX8 SOX8 22 1 - - - - 1.000 - - - -
47. CU302316.2 CU302316.2 1 1 - - - - - - - - 1.000
48. c1qtnf1 ENSDARG00000088878 4 1 - - - - - - 1.000 - - C1q and TNF related 1 [Source:ZFIN;Acc:ZDB-GENE-050417-427]
49. si:dkeyp-69e1.9 si:dkeyp-69e1.9 29 1 - - - - - - 1.000 - -
50. CR407588.1 ENSDARG00000115460 9 1 - - - - - - - - 1.000 SH3 and SYLF domain containing 1 [Source:NCBI gene;Acc:566522]
51. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
52. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - - - - - - 1.000 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
53. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
54. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1 - - - - - - 1.000 - - neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
55. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
56. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - 1.000 - - - -
57. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
58. CU896555.1 CU896555.1 27 1 - - - - - - 1.000 - -
59. prelp ENSDARG00000070597 99 1 - - - - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
60. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
61. si:dkey-19a16.7 ENSDARG00000071644 460 1 - - - - - - 1.000 - - si:dkey-19a16.7 [Source:ZFIN;Acc:ZDB-GENE-060503-903]
62. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - - - - - 1.000 - -
63. MUC5AC MUC5AC 32 1 - - - - - - 1.000 - -
64. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
65. dpyda dpyda 12 1 - - - - 1.000 - - - -
66. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
67. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
68. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1 - - - - - - 1.000 - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
69. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
70. supt7l ENSDARG00000013461 41 1 - - - - - - 1.000 - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
71. si:dkey-4c15.5 si:dkey-4c15.5 36 1 - - - - - - 1.000 - -
72. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
73. si:dkey-229d2.6 si:dkey-229d2.6 2 1 - - - - - - 1.000 - -
74. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - 1.000 - -
75. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
76. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
77. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - - - 1.000 - -
78. rnf150a_1 ENSDARG00000024827 12 1 - - - - - - 1.000 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
79. cyp2k8 ENSDARG00000101190 69 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
80. agmat ENSDARG00000059700 9 1 - - - - - - - - 1.000 agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
81. si:dkey-78k11.4 ENSDARG00000094399 13 1 - - - - - - 1.000 - - si:dkey-78k11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-740]
82. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
83. CU915778.1 ENSDARG00000099025 40 1 - - - - - - 1.000 - -
84. si:ch211-198b21.6 si:ch211-198b21.6 1 1 - - - - - - 1.000 - -
85. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
86. U6_10 U6_10 0 1 - - - - 1.000 - - - -
87. pcsk7 ENSDARG00000069968 5 1 - - - - - - 1.000 - - proprotein convertase subtilisin/kexin type 7 [Source:ZFIN;Acc:ZDB-GENE-030131-7293]
88. si:ch211-120c15.1 si:ch211-120c15.1 20 1 - - - - - - 1.000 - -
89. SNORA3_2 SNORA3_2 2 1 - - - - - - - - 1.000
90. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
91. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
92. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
93. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
94. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
95. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
96. serpinb1l2 ENSDARG00000070396 37 1 - - - - - - 1.000 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
97. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
98. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
99. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
100. batf3 ENSDARG00000042577 34 1 - - - - - - 1.000 - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]

There are 714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA